RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 THAP9Q9H5L6 903 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 DBNDD1Q9H9R9 158 aa12.89□□□□□ -0.35
C11orf54-214ENST00000540113 LUC7L2Q9Y383 392 aaKnown RBP12.89□□□□□ -0.35
C11orf54-214ENST00000540113 EPN1Q9Y6I3 576 aaPredicted RBP12.89□□□□□ -0.35
C11orf54-214ENST00000540113 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 CTAGE9A4FU28 777 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 NDUFA10O95299 355 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 TBC1D8O95759 1140 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 ALDH1B1P30837 517 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 MTIF2P46199 727 aaKnown RBP12.88□□□□□ -0.35
C11orf54-214ENST00000540113 TERF2Q15554 542 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 ASPRV1Q53RT3 343 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 HHIPL2Q6UWX4 724 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 KCNK18Q7Z418 384 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 OR8K1Q8NGG5 319 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 PNMA5Q96PV4 448 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 CAMKK2Q96RR4 588 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 SEMA6BQ9H3T3 888 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 DNAJC18Q9H819 358 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 ZCCHC17Q9NP64 241 aaKnown RBP12.88□□□□□ -0.35
C11orf54-214ENST00000540113 BLOC1S4Q9NUP1 217 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 HDAC6Q9UBN7 1215 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 LRWD1Q9UFC0 647 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 CDC23Q9UJX2 597 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 MYMKA6NI61 221 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 RHOXF2BP0C7M4 288 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 EEF1GP26641 437 aaKnown RBP12.88□□□□□ -0.35
C11orf54-214ENST00000540113 ADCY7P51828 1080 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 TBC1D8BQ0IIM8 1120 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 LRRC41Q15345 812 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 NCAPH2Q6IBW4 605 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 SRGAP1Q7Z6B7 1085 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 ADGRF4Q8IZF3 695 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 TEKT1Q969V4 418 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 RHOXF2Q9BQY4 288 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 SWAP70Q9UH65 585 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
C11orf54-214ENST00000540113 TTLL1O95922 423 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 IDEP14735 1019 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 CCNE1P24864 410 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 HERVK_113P62684 666 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 ZNF543Q08ER8 600 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 TRIM14Q14142 442 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 ECM1Q16610 540 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 CALML4Q96GE6 196 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 AK8Q96MA6 479 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 MTMR9Q96QG7 549 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 PNKPQ96T60 521 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 C7orf25Q9BPX7 421 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 ANKZF1Q9H8Y5 726 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 JMJD4Q9H9V9 463 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 RCCD1A6NED2 376 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 USP17L10C9JJH3 530 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 TRIM21P19474 475 aaKnown RBP12.87□□□□□ -0.35
C11orf54-214ENST00000540113 CRKP46108 304 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 VASPP50552 380 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-214ENST00000540113 GABPB1Q06547 395 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-214ENST00000540113 CCDC96Q2M329 555 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 MIIPQ5JXC2 388 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 RABGGTAQ92696 567 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 ZNF622Q969S3 477 aaKnown RBP eCLIP12.87□□□□□ -0.35
C11orf54-214ENST00000540113 DHTKD1Q96HY7 919 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-214ENST00000540113 NAPGQ99747 312 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-214ENST00000540113 NOC4LQ9BVI4 516 aaKnown RBP12.87□□□□□ -0.35
C11orf54-214ENST00000540113 RNF216Q9NWF9 866 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-214ENST00000540113 CAPN11Q9UMQ6 739 aa12.87□□□□□ -0.35
C11orf54-214ENST00000540113 hCG_1984214I3L0E3 225 aa12.86□□□□□ -0.35
C11orf54-214ENST00000540113 SRGAP2O75044 1071 aa12.86□□□□□ -0.35
C11orf54-214ENST00000540113 CYP27A1Q02318 531 aa12.86□□□□□ -0.35
C11orf54-214ENST00000540113 TCP10Q12799 353 aa12.86□□□□□ -0.35
C11orf54-214ENST00000540113 SV2BQ7L1I2 683 aa12.86□□□□□ -0.35
C11orf54-214ENST00000540113 ZNF713Q8N859 430 aaPredicted RBP12.86□□□□□ -0.35
C11orf54-214ENST00000540113 DNAJC7Q99615 494 aa12.86□□□□□ -0.35
C11orf54-214ENST00000540113 SUGCTQ9HAC7 445 aa12.86□□□□□ -0.35
C11orf54-214ENST00000540113 DUSP10Q9Y6W6 482 aa12.86□□□□□ -0.35
C11orf54-214ENST00000540113 PLEKP08567 350 aaPredicted RBP12.86□□□□□ -0.35
C11orf54-214ENST00000540113 DNM2P50570 870 aa12.86□□□□□ -0.35
C11orf54-214ENST00000540113 SNAP25P60880 206 aa12.86□□□□□ -0.35
C11orf54-214ENST00000540113 EZH2Q15910 746 aaKnown RBP12.86□□□□□ -0.35
C11orf54-214ENST00000540113 C2CD5Q86YS7 1000 aa12.86□□□□□ -0.35
C11orf54-214ENST00000540113 KIAA0825Q8IV33 1275 aa12.86□□□□□ -0.35
C11orf54-214ENST00000540113 SNX29Q8TEQ0 813 aa12.86□□□□□ -0.35
C11orf54-214ENST00000540113 CDK5RAP3Q96JB5 506 aa12.86□□□□□ -0.35
C11orf54-214ENST00000540113 ZNF219Q9P2Y4 722 aaPredicted RBP12.86□□□□□ -0.35
C11orf54-214ENST00000540113 A0A1W2PQC6 194 aa12.85□□□□□ -0.35
C11orf54-214ENST00000540113 ERICH4A6NGS2 130 aa12.85□□□□□ -0.35
C11orf54-214ENST00000540113 G3V3G9 751 aa12.85□□□□□ -0.35
C11orf54-214ENST00000540113 EPHB6O15197 1021 aa12.85□□□□□ -0.35
C11orf54-214ENST00000540113 MYL1P05976 194 aa12.85□□□□□ -0.35
C11orf54-214ENST00000540113 DCAF8Q5TAQ9 597 aa12.85□□□□□ -0.35
C11orf54-214ENST00000540113 NOA1Q8NC60 698 aaKnown RBP12.85□□□□□ -0.35
C11orf54-214ENST00000540113 CCDC47Q96A33 483 aaKnown RBP12.85□□□□□ -0.35
C11orf54-214ENST00000540113 ZDHHC15Q96MV8 337 aa12.85□□□□□ -0.35
C11orf54-214ENST00000540113 LACRTQ9GZZ8 138 aa12.85□□□□□ -0.35
C11orf54-214ENST00000540113 EHD4Q9H223 541 aa12.85□□□□□ -0.35
C11orf54-214ENST00000540113 CUEDC2Q9H467 287 aa12.85□□□□□ -0.35
C11orf54-214ENST00000540113 TBC1D7Q9P0N9 293 aa12.85□□□□□ -0.35
C11orf54-214ENST00000540113 MYH7BA7E2Y1 1941 aa12.85□□□□□ -0.35
C11orf54-214ENST00000540113 ARFGEF1Q9Y6D6 1849 aa12.85□□□□□ -0.35
C11orf54-214ENST00000540113 TAL1P17542 331 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms