RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 ARHGAP27Q6ZUM4 889 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 C3orf20Q8ND61 904 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 ATP6V1G3Q96LB4 118 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 SLC4A9Q96Q91 983 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 CARD10Q9BWT7 1032 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 EDEM3Q9BZQ6 932 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 MYH10P35580 1976 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 TOGARAM1Q9Y4F4 1720 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 NUP98P52948 1817 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 ORC4O43929 436 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 MDH1P40925 334 aaKnown RBP19.49■□□□□ 0.71
RAB40C-205ENST00000539661 ACTN3Q08043 901 aaPredicted RBP19.49■□□□□ 0.71
RAB40C-205ENST00000539661 VWA3BQ502W6 1294 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 KCTD16Q68DU8 428 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 PPP4R3AQ6IN85 833 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 ADGRA1Q86SQ6 560 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 AK8Q96MA6 479 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 SSU72P8A0A1W2PR75 194 aa19.48■□□□□ 0.71
RAB40C-205ENST00000539661 FAM107AO95990 144 aa19.48■□□□□ 0.71
RAB40C-205ENST00000539661 CXCR5P32302 372 aa19.48■□□□□ 0.71
RAB40C-205ENST00000539661 KIF5BP33176 963 aa19.48■□□□□ 0.71
RAB40C-205ENST00000539661 KLHDC7AQ5VTJ3 777 aa19.48■□□□□ 0.71
RAB40C-205ENST00000539661 NLRP14Q86W24 1093 aa19.48■□□□□ 0.71
RAB40C-205ENST00000539661 ARFGAP2Q8N6H7 521 aa19.48■□□□□ 0.71
RAB40C-205ENST00000539661 EIF1ADQ8N9N8 165 aaKnown RBP19.48■□□□□ 0.71
RAB40C-205ENST00000539661 TRIM9Q9C026 710 aa19.48■□□□□ 0.71
RAB40C-205ENST00000539661 ERVV-1B6SEH8 477 aa19.48■□□□□ 0.71
RAB40C-205ENST00000539661 KIF1CO43896 1103 aaKnown RBP19.48■□□□□ 0.71
RAB40C-205ENST00000539661 MYCBPAPQ8TBZ2 947 aa19.48■□□□□ 0.71
RAB40C-205ENST00000539661 PIK3R5Q8WYR1 880 aa19.48■□□□□ 0.71
RAB40C-205ENST00000539661 CCT8L2Q96SF2 557 aa19.48■□□□□ 0.71
RAB40C-205ENST00000539661 NFU1Q9UMS0 254 aa19.48■□□□□ 0.71
RAB40C-205ENST00000539661 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.48■□□□□ 0.714e-6■■■□□ 15.8
RAB40C-205ENST00000539661 MYH1P12882 1939 aa19.47■□□□□ 0.71
RAB40C-205ENST00000539661 HEXIM1O94992 359 aaKnown RBP19.47■□□□□ 0.71
RAB40C-205ENST00000539661 GLI1P08151 1106 aa19.47■□□□□ 0.71
RAB40C-205ENST00000539661 CARSP49589 748 aaKnown RBP19.47■□□□□ 0.71
RAB40C-205ENST00000539661 CNNM4Q6P4Q7 775 aa19.47■□□□□ 0.71
RAB40C-205ENST00000539661 CCDC194A0A1B0GVG4 234 aa19.47■□□□□ 0.71
RAB40C-205ENST00000539661 M0R2N6 131 aa19.47■□□□□ 0.71
RAB40C-205ENST00000539661 MRPS25P82663 173 aaKnown RBP19.47■□□□□ 0.71
RAB40C-205ENST00000539661 GUCY1A3Q02108 690 aa19.47■□□□□ 0.71
RAB40C-205ENST00000539661 ASTE1Q2TB18 679 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-205ENST00000539661 GALNT17Q6IS24 598 aa19.47■□□□□ 0.71
RAB40C-205ENST00000539661 NDST4Q9H3R1 872 aa19.47■□□□□ 0.71
RAB40C-205ENST00000539661 ACTR5Q9H9F9 607 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-205ENST00000539661 EPB41L5Q9HCM4 733 aa19.47■□□□□ 0.71
RAB40C-205ENST00000539661 SMARCAL1Q9NZC9 954 aa19.47■□□□□ 0.71
RAB40C-205ENST00000539661 FAM205AQ6ZU69 1335 aa19.47■□□□□ 0.71
RAB40C-205ENST00000539661 PP2D1A8MPX8 630 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 RBAK-RBAKDNI3L0D1 243 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 SMIM22K7EJ46 135 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 SNAP23O00161 211 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 ADAMTS3O15072 1205 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 FGFR1OPO95684 399 aaKnown RBP19.46■□□□□ 0.71
RAB40C-205ENST00000539661 AMPD3Q01432 767 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 STK4Q13043 487 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 CENPPQ6IPU0 288 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 LRIG3Q6UXM1 1119 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 DAGLBQ8NCG7 672 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 DONSONQ9NYP3 566 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 EHD2Q9NZN4 543 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 NCK2O43639 380 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 RDXP35241 583 aaKnown RBP19.46■□□□□ 0.71
RAB40C-205ENST00000539661 MAN2A1Q16706 1144 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 C6orf89Q6UWU4 347 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 PSMB7Q99436 277 aa19.46■□□□□ 0.71
RAB40C-205ENST00000539661 BAZ2AQ9UIF9 1905 aaKnown RBP19.46■□□□□ 0.71
RAB40C-205ENST00000539661 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.45■□□□□ 0.7
RAB40C-205ENST00000539661 C21orf2O43822 256 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 RASSF9O75901 435 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 FAM153BP0C7A2 387 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 HOXA7P31268 230 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-205ENST00000539661 GUCY2DQ02846 1103 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 ITGB3BPQ13352 177 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-205ENST00000539661 FAM153CQ494X1 144 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 CCDC40Q4G0X9 1142 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 CCDC178Q5BJE1 867 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 ZNF34Q8IZ26 560 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 ACSBG1Q96GR2 724 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 TMEM60Q9H2L4 133 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 LUC7LQ9NQ29 371 aaKnown RBP19.45■□□□□ 0.7
RAB40C-205ENST00000539661 KLC4Q9NSK0 619 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 TCP11L1Q9NUJ3 509 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 FAM153AQ9UHL3 310 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 FLT1P17948 1338 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 CICQ96RK0 1608 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-205ENST00000539661 LRRC53A6NM62 1247 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 PLCG1P19174 1290 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 HSPA9P38646 679 aaKnown RBP19.45■□□□□ 0.7
RAB40C-205ENST00000539661 SMIM5Q71RC9 77 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 CABP7Q86V35 215 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 MTMR8Q96EF0 704 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 JPH2Q9BR39 696 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-205ENST00000539661 SALL4Q9UJQ4 1053 aa19.45■□□□□ 0.7
RAB40C-205ENST00000539661 CACNA1SQ13698 1873 aa19.44■□□□□ 0.7
RAB40C-205ENST00000539661 VEGFAP15692 232 aaPredicted RBP19.44■□□□□ 0.7
RAB40C-205ENST00000539661 ASIC1P78348 528 aa19.44■□□□□ 0.7
RAB40C-205ENST00000539661 BAP1Q92560 729 aa19.44■□□□□ 0.7
RAB40C-205ENST00000539661 NUCKS1Q9H1E3 243 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms