RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 ASPRV1Q53RT3 343 aa16.34■□□□□ 0.21
CCND1-204ENST00000539241 BRDTQ58F21 947 aaPredicted RBP16.34■□□□□ 0.21
CCND1-204ENST00000539241 ADGRF4Q8IZF3 695 aa16.34■□□□□ 0.21
CCND1-204ENST00000539241 ENAHQ8N8S7 591 aaPredicted RBP16.34■□□□□ 0.21
CCND1-204ENST00000539241 COPS5Q92905 334 aa16.34■□□□□ 0.21
CCND1-204ENST00000539241 MTG1Q9BT17 334 aaPredicted RBP16.34■□□□□ 0.21
CCND1-204ENST00000539241 KRT23Q9C075 422 aa16.34■□□□□ 0.21
CCND1-204ENST00000539241 WNT8AQ9H1J5 351 aa16.34■□□□□ 0.21
CCND1-204ENST00000539241 CXXC1Q9P0U4 656 aaPredicted RBP16.34■□□□□ 0.21
CCND1-204ENST00000539241 ZSWIM5Q9P217 1185 aa16.34■□□□□ 0.21
CCND1-204ENST00000539241 TNKSO95271 1327 aa16.34■□□□□ 0.21
CCND1-204ENST00000539241 RAD50Q92878 1312 aa16.34■□□□□ 0.21
CCND1-204ENST00000539241 SUPT20HL2P0C7V6 817 aa16.33■□□□□ 0.2
CCND1-204ENST00000539241 CNNM2Q9H8M5 875 aa16.33■□□□□ 0.2
CCND1-204ENST00000539241 TRMT13Q9NUP7 481 aaKnown RBP16.33■□□□□ 0.2
CCND1-204ENST00000539241 ABCB11O95342 1321 aa16.33■□□□□ 0.2
CCND1-204ENST00000539241 VCANP13611 3396 aa16.33■□□□□ 0.2
CCND1-204ENST00000539241 DHX16O60231 1041 aaKnown RBP16.32■□□□□ 0.2
CCND1-204ENST00000539241 ARIH2O95376 493 aa16.32■□□□□ 0.2
CCND1-204ENST00000539241 PARP1P09874 1014 aaKnown RBP16.32■□□□□ 0.2
CCND1-204ENST00000539241 TXNP10599 105 aaKnown RBP16.32■□□□□ 0.2
CCND1-204ENST00000539241 CYP2C9P11712 490 aa16.32■□□□□ 0.2
CCND1-204ENST00000539241 TTLL4Q14679 1199 aa16.32■□□□□ 0.2
CCND1-204ENST00000539241 QRICH1Q2TAL8 776 aa16.32■□□□□ 0.2
CCND1-204ENST00000539241 OTOP2Q7RTS6 562 aa16.32■□□□□ 0.2
CCND1-204ENST00000539241 RPUSD2Q8IZ73 545 aaKnown RBP16.32■□□□□ 0.2
CCND1-204ENST00000539241 SYTL5Q8TDW5 730 aaPredicted RBP16.32■□□□□ 0.2
CCND1-204ENST00000539241 TBC1D5Q92609 795 aa16.32■□□□□ 0.2
CCND1-204ENST00000539241 SCLYQ96I15 445 aa16.32■□□□□ 0.2
CCND1-204ENST00000539241 UBAC1Q9BSL1 405 aa16.32■□□□□ 0.2
CCND1-204ENST00000539241 MAF1Q9H063 256 aa16.32■□□□□ 0.2
CCND1-204ENST00000539241 IL25Q9H293 177 aa16.32■□□□□ 0.2
CCND1-204ENST00000539241 MSRAQ9UJ68 235 aa16.32■□□□□ 0.2
CCND1-204ENST00000539241 A6NJR5 290 aa16.31■□□□□ 0.2
CCND1-204ENST00000539241 KPNA6O60684 536 aa16.31■□□□□ 0.2
CCND1-204ENST00000539241 RAB30Q15771 203 aa16.31■□□□□ 0.2
CCND1-204ENST00000539241 NBPF20Q3BBV1 942 aa16.31■□□□□ 0.2
CCND1-204ENST00000539241 FAM47CQ5HY64 1035 aa16.31■□□□□ 0.2
CCND1-204ENST00000539241 IFIT1BQ5T764 474 aaKnown RBP16.31■□□□□ 0.2
CCND1-204ENST00000539241 FBXO11Q86XK2 927 aa16.31■□□□□ 0.2
CCND1-204ENST00000539241 MCF2L2Q86YR7 1114 aa16.31■□□□□ 0.2
CCND1-204ENST00000539241 TAAR1Q96RJ0 339 aa16.31■□□□□ 0.2
CCND1-204ENST00000539241 VAT1LQ9HCJ6 419 aa16.31■□□□□ 0.2
CCND1-204ENST00000539241 MRPL11Q9Y3B7 192 aaKnown RBP16.31■□□□□ 0.2
CCND1-204ENST00000539241 NFRKBQ6P4R8 1299 aa16.3■□□□□ 0.2
CCND1-204ENST00000539241 NSUN6Q8TEA1 469 aaKnown RBP16.3■□□□□ 0.2
CCND1-204ENST00000539241 VWCEQ96DN2 955 aa16.3■□□□□ 0.2
CCND1-204ENST00000539241 GAS2L1Q99501 681 aaPredicted RBP16.3■□□□□ 0.2
CCND1-204ENST00000539241 JMJD4Q9H9V9 463 aa16.3■□□□□ 0.2
CCND1-204ENST00000539241 COL20A1Q9P218 1284 aa16.3■□□□□ 0.2
CCND1-204ENST00000539241 ZBBXA8MT70 800 aa16.29■□□□□ 0.2
CCND1-204ENST00000539241 CCDC62Q6P9F0 684 aa16.29■□□□□ 0.2
CCND1-204ENST00000539241 SEPT14Q6ZU15 432 aa16.29■□□□□ 0.2
CCND1-204ENST00000539241 STAG2Q8N3U4 1231 aa16.29■□□□□ 0.2
CCND1-204ENST00000539241 USP38Q8NB14 1042 aa16.29■□□□□ 0.2
CCND1-204ENST00000539241 PPP1R13LQ8WUF5 828 aa16.29■□□□□ 0.2
CCND1-204ENST00000539241 IWS1Q96ST2 819 aa16.29■□□□□ 0.2
CCND1-204ENST00000539241 RMDN3Q96TC7 470 aa16.29■□□□□ 0.2
CCND1-204ENST00000539241 NKX2-4Q9H2Z4 354 aa16.29■□□□□ 0.2
CCND1-204ENST00000539241 PRDM12Q9H4Q4 367 aa16.29■□□□□ 0.2
CCND1-204ENST00000539241 SLC4A7Q9Y6M7 1214 aa16.29■□□□□ 0.2
CCND1-204ENST00000539241 CHD9Q3L8U1 2897 aa16.29■□□□□ 0.2
CCND1-204ENST00000539241 GH1P01241 217 aa16.28■□□□□ 0.2
CCND1-204ENST00000539241 PFKMP08237 780 aa16.28■□□□□ 0.2
CCND1-204ENST00000539241 CHMLP26374 656 aa16.28■□□□□ 0.2
CCND1-204ENST00000539241 PTPN11Q06124 597 aaPredicted RBP16.28■□□□□ 0.2
CCND1-204ENST00000539241 SEC23AQ15436 765 aa16.28■□□□□ 0.2
CCND1-204ENST00000539241 STXBP2Q15833 593 aa16.28■□□□□ 0.2
CCND1-204ENST00000539241 LY6KQ17RY6 165 aa16.28■□□□□ 0.2
CCND1-204ENST00000539241 ARHGEF16Q5VV41 709 aa16.28■□□□□ 0.2
CCND1-204ENST00000539241 CYB5R4Q7L1T6 521 aa16.28■□□□□ 0.2
CCND1-204ENST00000539241 DEFB128Q7Z7B8 93 aa16.28■□□□□ 0.2
CCND1-204ENST00000539241 AFG1LQ8WV93 481 aa16.28■□□□□ 0.2
CCND1-204ENST00000539241 YBX2Q9Y2T7 364 aaKnown RBP16.28■□□□□ 0.2
CCND1-204ENST00000539241 LAMA4Q16363 1823 aa16.27■□□□□ 0.2
CCND1-204ENST00000539241 CFBP00751 764 aa16.27■□□□□ 0.2
CCND1-204ENST00000539241 MMP3P08254 477 aa16.27■□□□□ 0.2
CCND1-204ENST00000539241 EIF2AK2P19525 551 aaKnown RBP16.27■□□□□ 0.2
CCND1-204ENST00000539241 CHMP4BP1P59074 171 aa16.27■□□□□ 0.2
CCND1-204ENST00000539241 TRDNQ13061 729 aa16.27■□□□□ 0.2
CCND1-204ENST00000539241 RUFY2Q8WXA3 655 aa16.27■□□□□ 0.2
CCND1-204ENST00000539241 AMNQ9BXJ7 453 aa16.27■□□□□ 0.2
CCND1-204ENST00000539241 SLC28A3Q9HAS3 691 aa16.27■□□□□ 0.2
CCND1-204ENST00000539241 NOD1Q9Y239 953 aa16.27■□□□□ 0.2
CCND1-204ENST00000539241 KLRF2D3W0D1 207 aa16.26■□□□□ 0.19
CCND1-204ENST00000539241 PITPNM1O00562 1244 aa16.26■□□□□ 0.19
CCND1-204ENST00000539241 CDC45O75419 566 aa16.26■□□□□ 0.19
CCND1-204ENST00000539241 ATP2A2P16615 1042 aaKnown RBP16.26■□□□□ 0.19
CCND1-204ENST00000539241 RFC2P35250 354 aa16.26■□□□□ 0.19
CCND1-204ENST00000539241 RABGGTBP53611 331 aa16.26■□□□□ 0.19
CCND1-204ENST00000539241 ARHGAP1Q07960 439 aa16.26■□□□□ 0.19
CCND1-204ENST00000539241 CHST3Q7LGC8 479 aa16.26■□□□□ 0.19
CCND1-204ENST00000539241 RETREG2Q8NC44 543 aa16.26■□□□□ 0.19
CCND1-204ENST00000539241 MTMR8Q96EF0 704 aa16.26■□□□□ 0.19
CCND1-204ENST00000539241 PXMP2Q9NR77 195 aa16.26■□□□□ 0.19
CCND1-204ENST00000539241 MAD2L2Q9UI95 211 aa16.26■□□□□ 0.19
CCND1-204ENST00000539241 SPTBN5Q9NRC6 3674 aaKnown RBP16.26■□□□□ 0.19
CCND1-204ENST00000539241 SCN10AQ9Y5Y9 1956 aa16.26■□□□□ 0.19
CCND1-204ENST00000539241 CHD7Q9P2D1 2997 aa16.25■□□□□ 0.19
CCND1-204ENST00000539241 OPLAHO14841 1288 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms