RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 MAF1Q9H063 256 aa20.62■□□□□ 0.89
DDX55-204ENST00000536079 SLKQ9H2G2 1235 aaPredicted RBP20.62■□□□□ 0.89
DDX55-204ENST00000536079 ABHD16BQ9H3Z7 469 aa20.62■□□□□ 0.89
DDX55-204ENST00000536079 PXMP2Q9NR77 195 aa20.62■□□□□ 0.89
DDX55-204ENST00000536079 ADD3Q9UEY8 706 aaKnown RBP20.62■□□□□ 0.89
DDX55-204ENST00000536079 LRRC37A2A6NM11 1700 aa20.61■□□□□ 0.89
DDX55-204ENST00000536079 SCG2P13521 617 aa20.61■□□□□ 0.89
DDX55-204ENST00000536079 ADCYAP1R1P41586 468 aa20.61■□□□□ 0.89
DDX55-204ENST00000536079 TRAF1Q13077 416 aa20.61■□□□□ 0.89
DDX55-204ENST00000536079 ANKRD1Q15327 319 aa20.61■□□□□ 0.89
DDX55-204ENST00000536079 CCDC144BQ3MJ40 725 aa20.61■□□□□ 0.89
DDX55-204ENST00000536079 ZFP91Q96JP5 570 aaPredicted RBP20.61■□□□□ 0.89
DDX55-204ENST00000536079 AIFM3Q96NN9 605 aa20.61■□□□□ 0.89
DDX55-204ENST00000536079 BARHL2Q9NY43 387 aa20.61■□□□□ 0.89
DDX55-204ENST00000536079 ARHGEF16Q5VV41 709 aa20.6■□□□□ 0.89
DDX55-204ENST00000536079 NSUN6Q8TEA1 469 aaKnown RBP20.6■□□□□ 0.89
DDX55-204ENST00000536079 PSTPIP2Q9H939 334 aa20.6■□□□□ 0.89
DDX55-204ENST00000536079 PIK3CDO00329 1044 aa20.59■□□□□ 0.89
DDX55-204ENST00000536079 CD2BP2O95400 341 aaKnown RBP20.59■□□□□ 0.89
DDX55-204ENST00000536079 AKR1A1P14550 325 aa20.59■□□□□ 0.89
DDX55-204ENST00000536079 NAPAP54920 295 aa20.59■□□□□ 0.89
DDX55-204ENST00000536079 PDE4DQ08499 809 aa20.59■□□□□ 0.89
DDX55-204ENST00000536079 GJC2Q5T442 439 aaPredicted RBP20.59■□□□□ 0.89
DDX55-204ENST00000536079 SAMD3Q8N6K7 520 aa20.59■□□□□ 0.89
DDX55-204ENST00000536079 PDCD2LQ9BRP1 358 aa20.59■□□□□ 0.89
DDX55-204ENST00000536079 RNF26Q9BY78 433 aaPredicted RBP20.59■□□□□ 0.89
DDX55-204ENST00000536079 MAP3K20Q9NYL2 800 aaKnown RBP20.59■□□□□ 0.89
DDX55-204ENST00000536079 FAM184BQ9ULE4 1060 aa20.59■□□□□ 0.89
DDX55-204ENST00000536079 MYADML2A6NDP7 307 aa20.58■□□□□ 0.89
DDX55-204ENST00000536079 PGK1P00558 417 aa20.58■□□□□ 0.89
DDX55-204ENST00000536079 NR3C2P08235 984 aa20.58■□□□□ 0.89
DDX55-204ENST00000536079 SMPD1P17405 629 aa20.58■□□□□ 0.89
DDX55-204ENST00000536079 SSRP1Q08945 709 aaKnown RBP20.58■□□□□ 0.89
DDX55-204ENST00000536079 PGM5Q15124 567 aa20.58■□□□□ 0.89
DDX55-204ENST00000536079 SMARCC2Q8TAQ2 1214 aa20.58■□□□□ 0.89
DDX55-204ENST00000536079 GTF3C6Q969F1 213 aa20.58■□□□□ 0.89
DDX55-204ENST00000536079 UPF2Q9HAU5 1272 aaKnown RBP20.58■□□□□ 0.89
DDX55-204ENST00000536079 VTA1Q9NP79 307 aa20.58■□□□□ 0.89
DDX55-204ENST00000536079 LOC102724159A0A0B4J2E5 919 aa20.57■□□□□ 0.88
DDX55-204ENST00000536079 SMCO2A6NFE2 343 aa20.57■□□□□ 0.88
DDX55-204ENST00000536079 CPLX1O14810 134 aa20.57■□□□□ 0.88
DDX55-204ENST00000536079 FARP2O94887 1054 aaPredicted RBP20.57■□□□□ 0.88
DDX55-204ENST00000536079 ARIH2O95376 493 aa20.57■□□□□ 0.88
DDX55-204ENST00000536079 PWP2Q15269 919 aaKnown RBP20.57■□□□□ 0.88
DDX55-204ENST00000536079 RABEP1Q15276 862 aa20.57■□□□□ 0.88
DDX55-204ENST00000536079 PAWRQ96IZ0 340 aaKnown RBP20.57■□□□□ 0.88
DDX55-204ENST00000536079 PGBD1Q96JS3 809 aa20.57■□□□□ 0.88
DDX55-204ENST00000536079 RIC8AQ9NPQ8 531 aa20.57■□□□□ 0.88
DDX55-204ENST00000536079 TMEM260Q9NX78 707 aa20.57■□□□□ 0.88
DDX55-204ENST00000536079 VPS54Q9P1Q0 977 aa20.57■□□□□ 0.88
DDX55-204ENST00000536079 LIMCH1Q9UPQ0 1083 aa20.57■□□□□ 0.88
DDX55-204ENST00000536079 GNEQ9Y223 722 aaKnown RBP20.57■□□□□ 0.88
DDX55-204ENST00000536079 FRMPD4Q14CM0 1322 aa20.56■□□□□ 0.88
DDX55-204ENST00000536079 FRMPD3Q5JV73 1810 aa20.56■□□□□ 0.88
DDX55-204ENST00000536079 RBM47A0AV96 593 aaKnown RBP20.56■□□□□ 0.88
DDX55-204ENST00000536079 MSCO60682 206 aa20.56■□□□□ 0.88
DDX55-204ENST00000536079 RGS20O76081 388 aa20.56■□□□□ 0.88
DDX55-204ENST00000536079 RARBP10826 455 aa20.56■□□□□ 0.88
DDX55-204ENST00000536079 MYCLP12524 364 aaPredicted RBP20.56■□□□□ 0.88
DDX55-204ENST00000536079 FDPSP14324 419 aaKnown RBP20.56■□□□□ 0.88
DDX55-204ENST00000536079 TNFAIP2Q03169 654 aa20.56■□□□□ 0.88
DDX55-204ENST00000536079 PPP1R18Q6NYC8 613 aa20.56■□□□□ 0.88
DDX55-204ENST00000536079 COPS5Q92905 334 aa20.56■□□□□ 0.88
DDX55-204ENST00000536079 CUL5Q93034 780 aa20.56■□□□□ 0.88
DDX55-204ENST00000536079 IWS1Q96ST2 819 aa20.56■□□□□ 0.88
DDX55-204ENST00000536079 SYNRGQ9UMZ2 1314 aa20.55■□□□□ 0.88
DDX55-204ENST00000536079 CTAGE5O15320 804 aa20.55■□□□□ 0.88
DDX55-204ENST00000536079 JAK2O60674 1132 aa20.55■□□□□ 0.88
DDX55-204ENST00000536079 ADAMTS4O75173 837 aa20.55■□□□□ 0.88
DDX55-204ENST00000536079 ADCY7P51828 1080 aa20.55■□□□□ 0.88
DDX55-204ENST00000536079 MRPS9P82933 396 aaKnown RBP20.55■□□□□ 0.88
DDX55-204ENST00000536079 AKAP17AQ02040 695 aaKnown RBP20.55■□□□□ 0.88
DDX55-204ENST00000536079 LRRC41Q15345 812 aa20.55■□□□□ 0.88
DDX55-204ENST00000536079 SEPT14Q6ZU15 432 aa20.55■□□□□ 0.88
DDX55-204ENST00000536079 VSIG10LQ86VR7 867 aa20.55■□□□□ 0.88
DDX55-204ENST00000536079 XPNPEP3Q9NQH7 507 aa20.55■□□□□ 0.88
DDX55-204ENST00000536079 GJB4Q9NTQ9 266 aa20.55■□□□□ 0.88
DDX55-204ENST00000536079 hCG_1984214I3L0E3 225 aa20.54■□□□□ 0.88
DDX55-204ENST00000536079 DUSP11O75319 330 aaKnown RBP20.54■□□□□ 0.88
DDX55-204ENST00000536079 MYCNP04198 464 aaPredicted RBP20.54■□□□□ 0.88
DDX55-204ENST00000536079 CLK2P49760 499 aaKnown RBP20.54■□□□□ 0.88
DDX55-204ENST00000536079 STXBP2Q15833 593 aa20.54■□□□□ 0.88
DDX55-204ENST00000536079 IQSEC1Q6DN90 963 aa20.54■□□□□ 0.88
DDX55-204ENST00000536079 ZNF713Q8N859 430 aaPredicted RBP20.54■□□□□ 0.88
DDX55-204ENST00000536079 NSUN7Q8NE18 718 aaKnown RBP20.54■□□□□ 0.88
DDX55-204ENST00000536079 WDR11Q9BZH6 1224 aa20.54■□□□□ 0.88
DDX55-204ENST00000536079 ZMYND12Q9H0C1 365 aa20.54■□□□□ 0.88
DDX55-204ENST00000536079 PCDHA6Q9UN73 950 aa20.54■□□□□ 0.88
DDX55-204ENST00000536079 PCDHA8Q9Y5H6 950 aa20.54■□□□□ 0.88
DDX55-204ENST00000536079 TNRC18O15417 2968 aaPredicted RBP20.53■□□□□ 0.88
DDX55-204ENST00000536079 DEXIO95424 95 aa20.53■□□□□ 0.88
DDX55-204ENST00000536079 COL6A1P12109 1028 aa20.53■□□□□ 0.88
DDX55-204ENST00000536079 CCDC62Q6P9F0 684 aa20.53■□□□□ 0.88
DDX55-204ENST00000536079 CCDC83Q8IWF9 413 aa20.53■□□□□ 0.88
DDX55-204ENST00000536079 TRIM22Q8IYM9 498 aa20.53■□□□□ 0.88
DDX55-204ENST00000536079 ANKLE1Q8NAG6 615 aa20.53■□□□□ 0.88
DDX55-204ENST00000536079 KLHDC9Q8NEP7 349 aa20.53■□□□□ 0.88
DDX55-204ENST00000536079 RASGRP4Q8TDF6 673 aa20.53■□□□□ 0.88
DDX55-204ENST00000536079 UPF3AQ9H1J1 476 aaKnown RBP20.53■□□□□ 0.88
DDX55-204ENST00000536079 RBM27Q9P2N5 1060 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms