RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 RETREG2Q8NC44 543 aa25.05■■□□□ 1.6
SSH3-211ENST00000534112 BDP1A6H8Y1 2624 aa25.04■■□□□ 1.6
SSH3-211ENST00000534112 TXNP10599 105 aaKnown RBP25.04■■□□□ 1.6
SSH3-211ENST00000534112 PTPN11Q06124 597 aaPredicted RBP25.04■■□□□ 1.6
SSH3-211ENST00000534112 MFSD6Q6ZSS7 791 aa25.04■■□□□ 1.6
SSH3-211ENST00000534112 ZNF589Q86UQ0 364 aaPredicted RBP25.04■■□□□ 1.6
SSH3-211ENST00000534112 TICAM2Q86XR7 235 aa25.04■■□□□ 1.6
SSH3-211ENST00000534112 ZMYM6O95789 1325 aa25.04■■□□□ 1.6
SSH3-211ENST00000534112 B4DLN1 442 aa25.03■■□□□ 1.6
SSH3-211ENST00000534112 RFXAPO00287 272 aa25.03■■□□□ 1.6
SSH3-211ENST00000534112 MRPL12P52815 198 aaKnown RBP25.03■■□□□ 1.6
SSH3-211ENST00000534112 RGS22Q8NE09 1264 aa25.03■■□□□ 1.6
SSH3-211ENST00000534112 PHOSPHO2Q8TCD6 241 aa25.03■■□□□ 1.6
SSH3-211ENST00000534112 SLC9A7Q96T83 725 aa25.03■■□□□ 1.6
SSH3-211ENST00000534112 REV3LO60673 3130 aa25.02■■□□□ 1.6
SSH3-211ENST00000534112 ARIH2O95376 493 aa25.02■■□□□ 1.6
SSH3-211ENST00000534112 PCP11498 1178 aaKnown RBP25.02■■□□□ 1.6
SSH3-211ENST00000534112 BMP1P13497 986 aa25.02■■□□□ 1.6
SSH3-211ENST00000534112 POU3F3P20264 500 aaPredicted RBP25.02■■□□□ 1.6
SSH3-211ENST00000534112 NMIQ13287 307 aaPredicted RBP25.02■■□□□ 1.6
SSH3-211ENST00000534112 BFSP2Q13515 415 aa25.02■■□□□ 1.6
SSH3-211ENST00000534112 FTOQ9C0B1 505 aaKnown RBP eCLIP25.02■■□□□ 1.6
SSH3-211ENST00000534112 CERS4Q9HA82 394 aa25.02■■□□□ 1.6
SSH3-211ENST00000534112 MTCH2Q9Y6C9 303 aa25.02■■□□□ 1.6
SSH3-211ENST00000534112 GBF1Q92538 1859 aa25.01■■□□□ 1.59
SSH3-211ENST00000534112 TFF2Q03403 129 aa25.01■■□□□ 1.59
SSH3-211ENST00000534112 USH1GQ495M9 461 aa25.01■■□□□ 1.59
SSH3-211ENST00000534112 GPATCH4Q5T3I0 446 aaKnown RBP25.01■■□□□ 1.59
SSH3-211ENST00000534112 TBC1D10CQ8IV04 446 aa25.01■■□□□ 1.59
SSH3-211ENST00000534112 NOD1Q9Y239 953 aa25.01■■□□□ 1.59
SSH3-211ENST00000534112 TRANK1O15050 2925 aa25■■□□□ 1.59
SSH3-211ENST00000534112 SCN10AQ9Y5Y9 1956 aa25■■□□□ 1.59
SSH3-211ENST00000534112 GTPBP6O43824 516 aaPredicted RBP25■■□□□ 1.59
SSH3-211ENST00000534112 GOLGA8HP0CJ92 632 aa25■■□□□ 1.59
SSH3-211ENST00000534112 CHMP4BP1P59074 171 aa25■■□□□ 1.59
SSH3-211ENST00000534112 SKIV2LQ15477 1246 aaKnown RBP25■■□□□ 1.59
SSH3-211ENST00000534112 CCDC62Q6P9F0 684 aa25■■□□□ 1.59
SSH3-211ENST00000534112 HERC6Q8IVU3 1022 aa25■■□□□ 1.59
SSH3-211ENST00000534112 UBA5Q9GZZ9 404 aa25■■□□□ 1.59
SSH3-211ENST00000534112 CPVLQ9H3G5 476 aa25■■□□□ 1.59
SSH3-211ENST00000534112 CCDC171Q6TFL3 1326 aa25■■□□□ 1.59
SSH3-211ENST00000534112 EPOPA6NHQ4 379 aa24.99■■□□□ 1.59
SSH3-211ENST00000534112 TAP1Q03518 808 aa24.99■■□□□ 1.59
SSH3-211ENST00000534112 AAK1Q2M2I8 961 aa24.99■■□□□ 1.59
SSH3-211ENST00000534112 PRRC2BQ5JSZ5 2229 aaKnown RBP24.99■■□□□ 1.59
SSH3-211ENST00000534112 AFG1LQ8WV93 481 aa24.99■■□□□ 1.59
SSH3-211ENST00000534112 TBC1D5Q92609 795 aa24.99■■□□□ 1.59
SSH3-211ENST00000534112 NECAB3Q96P71 396 aaPredicted RBP24.99■■□□□ 1.59
SSH3-211ENST00000534112 RNF41Q9H4P4 317 aaPredicted RBP24.99■■□□□ 1.59
SSH3-211ENST00000534112 KIF28PB7ZC32 967 aa24.98■■□□□ 1.59
SSH3-211ENST00000534112 ARHGEF15O94989 841 aa24.98■■□□□ 1.59
SSH3-211ENST00000534112 HDAC1Q13547 482 aaPredicted RBP24.98■■□□□ 1.59
SSH3-211ENST00000534112 PTGISQ16647 500 aa24.98■■□□□ 1.59
SSH3-211ENST00000534112 DGKHQ86XP1 1220 aa24.98■■□□□ 1.59
SSH3-211ENST00000534112 ARNTL2Q8WYA1 636 aa24.98■■□□□ 1.59
SSH3-211ENST00000534112 ESR2Q92731 530 aa24.98■■□□□ 1.59
SSH3-211ENST00000534112 ZKSCAN3Q9BRR0 538 aa24.98■■□□□ 1.59
SSH3-211ENST00000534112 RAPGEFL1Q9UHV5 662 aa24.98■■□□□ 1.59
SSH3-211ENST00000534112 LY6KQ17RY6 165 aa24.97■■□□□ 1.59
SSH3-211ENST00000534112 SEPT14Q6ZU15 432 aa24.97■■□□□ 1.59
SSH3-211ENST00000534112 TAAR1Q96RJ0 339 aa24.97■■□□□ 1.59
SSH3-211ENST00000534112 CTAGE1Q96RT6 745 aa24.97■■□□□ 1.59
SSH3-211ENST00000534112 MAF1Q9H063 256 aa24.97■■□□□ 1.59
SSH3-211ENST00000534112 NEDD4P46934 1319 aa24.96■■□□□ 1.59
SSH3-211ENST00000534112 TRIM6-TRIM34B2RNG4 842 aa24.96■■□□□ 1.59
SSH3-211ENST00000534112 BAIAP3O94812 1187 aa24.96■■□□□ 1.59
SSH3-211ENST00000534112 KCNQ1P51787 676 aa24.96■■□□□ 1.59
SSH3-211ENST00000534112 RRP1P56182 461 aaKnown RBP24.96■■□□□ 1.59
SSH3-211ENST00000534112 CDC37Q16543 378 aaPredicted RBP24.96■■□□□ 1.59
SSH3-211ENST00000534112 KRT40Q6A162 431 aa24.96■■□□□ 1.59
SSH3-211ENST00000534112 CAGE1Q8TC20 777 aa24.96■■□□□ 1.59
SSH3-211ENST00000534112 SYTL5Q8TDW5 730 aaPredicted RBP24.96■■□□□ 1.59
SSH3-211ENST00000534112 NSUN6Q8TEA1 469 aaKnown RBP24.96■■□□□ 1.59
SSH3-211ENST00000534112 CRBNQ96SW2 442 aa24.96■■□□□ 1.59
SSH3-211ENST00000534112 SCN5AQ14524 2016 aa24.95■■□□□ 1.58
SSH3-211ENST00000534112 GH1P01241 217 aa24.95■■□□□ 1.58
SSH3-211ENST00000534112 MMP3P08254 477 aa24.95■■□□□ 1.58
SSH3-211ENST00000534112 ARHGAP1Q07960 439 aa24.95■■□□□ 1.58
SSH3-211ENST00000534112 GDF6Q6KF10 455 aaPredicted RBP24.95■■□□□ 1.58
SSH3-211ENST00000534112 SESTD1Q86VW0 696 aa24.95■■□□□ 1.58
SSH3-211ENST00000534112 CCDC155Q8N6L0 562 aa24.95■■□□□ 1.58
SSH3-211ENST00000534112 PNMA1Q8ND90 353 aa24.95■■□□□ 1.58
SSH3-211ENST00000534112 AFAP1L1Q8TED9 768 aa24.95■■□□□ 1.58
SSH3-211ENST00000534112 KAT2BQ92831 832 aa24.95■■□□□ 1.58
SSH3-211ENST00000534112 RILPL2Q969X0 211 aa24.95■■□□□ 1.58
SSH3-211ENST00000534112 COL20A1Q9P218 1284 aa24.95■■□□□ 1.58
SSH3-211ENST00000534112 ABCB11O95342 1321 aa24.94■■□□□ 1.58
SSH3-211ENST00000534112 ZNF213O14771 459 aa24.94■■□□□ 1.58
SSH3-211ENST00000534112 MFAP1P55081 439 aaKnown RBP24.94■■□□□ 1.58
SSH3-211ENST00000534112 GPNMBQ14956 572 aa24.94■■□□□ 1.58
SSH3-211ENST00000534112 STXBP2Q15833 593 aa24.94■■□□□ 1.58
SSH3-211ENST00000534112 CHST3Q7LGC8 479 aa24.94■■□□□ 1.58
SSH3-211ENST00000534112 ADGRF4Q8IZF3 695 aa24.94■■□□□ 1.58
SSH3-211ENST00000534112 IWS1Q96ST2 819 aa24.94■■□□□ 1.58
SSH3-211ENST00000534112 TLL1O43897 1013 aa24.93■■□□□ 1.58
SSH3-211ENST00000534112 SELPP16109 830 aa24.93■■□□□ 1.58
SSH3-211ENST00000534112 SDSP20132 328 aa24.93■■□□□ 1.58
SSH3-211ENST00000534112 CASTP20810 708 aaKnown RBP24.93■■□□□ 1.58
SSH3-211ENST00000534112 KCNJ6P48051 423 aa24.93■■□□□ 1.58
SSH3-211ENST00000534112 CCDC178Q5BJE1 867 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms