RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 C16orf86Q6ZW13 317 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 TAX1BP1Q86VP1 789 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 IGSF22Q8N9C0 903 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 KIFAP3Q92845 792 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 RNF34Q969K3 372 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 MMS19Q96T76 1030 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 PARK7Q99497 189 aaKnown RBP17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 COBLO75128 1261 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 AP3B2Q13367 1082 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 SMC1AQ14683 1233 aaKnown RBP17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 JPH2Q9BR39 696 aaPredicted RBP17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 NACA2Q9H009 215 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 LMBRD1Q9NUN5 540 aa17.4■□□□□ 0.38
PPFIA1-222ENST00000532504 KIF2AO00139 706 aaPredicted RBP17.39■□□□□ 0.38
PPFIA1-222ENST00000532504 SNW1Q13573 536 aaKnown RBP17.39■□□□□ 0.38
PPFIA1-222ENST00000532504 RPS6KC1Q96S38 1066 aa17.39■□□□□ 0.38
PPFIA1-222ENST00000532504 CTNND1O60716 968 aaKnown RBP17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 TEX35Q5T0J7 233 aa17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 NLRP4Q96MN2 994 aa17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 PODXL2Q9NZ53 605 aa17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 WDR46O15213 610 aaKnown RBP17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 TNFAIP3P21580 790 aa17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 OXER1Q8TDS5 423 aa17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 FERMT1Q9BQL6 677 aa17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 GLIS2Q9BZE0 524 aaPredicted RBP17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 GBA2Q9HCG7 927 aaPredicted RBP17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 LRFN2Q9ULH4 789 aa17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 H0YCG3 227 aa17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 ERLIN1O75477 346 aa17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 FGFR2P21802 821 aa17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 LRRC41Q15345 812 aa17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 CCDC50Q8IVM0 306 aa17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 ZDHHC15Q96MV8 337 aa17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 KMT5AQ9NQR1 393 aa17.39■□□□□ 0.37
PPFIA1-222ENST00000532504 CETPP11597 493 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 CASP7P55210 303 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 VCPKMTQ9H867 229 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 RPN1P04843 607 aaKnown RBP17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 LMAN1P49257 510 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 ARHGAP4P98171 946 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 KIF5AQ12840 1032 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 PPP2R5AQ15172 486 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 LPAR1Q92633 364 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 TEX13BQ9BXU2 312 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 GTPBP6O43824 516 aaPredicted RBP17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 HOOK3Q86VS8 718 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 MCM6Q14566 821 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 TTLL4Q14679 1199 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 GRAMD1CQ8IYS0 662 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 PIGOQ8TEQ8 1089 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 KIAA1468Q9P260 1216 aa17.38■□□□□ 0.37
PPFIA1-222ENST00000532504 TMEM191BP0C7N4 346 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 TM4SF1P30408 202 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 OSTNP61366 133 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 PLCB3Q01970 1234 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 NYAP2Q9P242 653 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 PHLPP1O60346 1717 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 FANCCQ00597 558 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 FAM207AQ9NSI2 230 aaPredicted RBP17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 GUCA1BQ9UMX6 200 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 ZSCAN20P17040 1043 aaPredicted RBP17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 SCYL3Q8IZE3 742 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 NUB1Q9Y5A7 615 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 TNNC2P02585 160 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 XRCC5P13010 732 aaKnown RBP17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 INPP5BP32019 993 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 ZNF543Q08ER8 600 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 BANK1Q8NDB2 785 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 AK8Q96MA6 479 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 CBX8Q9HC52 389 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 SH3GLB2Q9NR46 395 aa17.37■□□□□ 0.37
PPFIA1-222ENST00000532504 HOXA10P31260 410 aaPredicted RBP17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 BAATQ14032 418 aaPredicted RBP17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 HLTFQ14527 1009 aaKnown RBP eCLIP17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 SRBD1Q8N5C6 995 aaKnown RBP17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 PLVAPQ9BX97 442 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 NLRC4Q9NPP4 1024 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 ADM5C9JUS6 153 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 BHMT2Q9H2M3 363 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 LZTFL1Q9NQ48 299 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 POTEMA6NI47 508 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 PPP4CP60510 307 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 RNASELQ05823 741 aaKnown RBP17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 CUL4AQ13619 759 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 EPSTI1Q96J88 318 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 IL1R1P14778 569 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 SETQ01105 290 aaPredicted RBP17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 ADAM9Q13443 819 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 ZBTB33Q86T24 672 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 GPC2Q8N158 579 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 EHBP1Q8NDI1 1231 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 ACER1Q8TDN7 264 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 POLD4Q9HCU8 107 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 POLR3EQ9NVU0 708 aa17.36■□□□□ 0.37
PPFIA1-222ENST00000532504 FDX1P10109 184 aa17.35■□□□□ 0.37
PPFIA1-222ENST00000532504 KRT83P78385 493 aa17.35■□□□□ 0.37
PPFIA1-222ENST00000532504 CCDC117Q8IWD4 279 aaPredicted RBP17.35■□□□□ 0.37
PPFIA1-222ENST00000532504 ZNF668Q96K58 619 aaPredicted RBP17.35■□□□□ 0.37
PPFIA1-222ENST00000532504 ARMCX3Q9UH62 379 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms