RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 IWS1Q96ST2 819 aa13.57□□□□□ -0.24
PPFIA1-220ENST00000532024 SMC3Q9UQE7 1217 aa13.57□□□□□ -0.24
PPFIA1-220ENST00000532024 SOWAHBA6NEL2 793 aa13.56□□□□□ -0.24
PPFIA1-220ENST00000532024 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
PPFIA1-220ENST00000532024 CYP2C19P33261 490 aa13.56□□□□□ -0.24
PPFIA1-220ENST00000532024 MLLT1Q03111 559 aaPredicted RBP13.56□□□□□ -0.24
PPFIA1-220ENST00000532024 ST3GAL1Q11201 340 aa13.56□□□□□ -0.24
PPFIA1-220ENST00000532024 BECN1Q14457 450 aa13.56□□□□□ -0.24
PPFIA1-220ENST00000532024 SAFBQ15424 915 aaKnown RBP eCLIP13.56□□□□□ -0.24
PPFIA1-220ENST00000532024 USP17L6PQ6QN14 398 aa13.56□□□□□ -0.24
PPFIA1-220ENST00000532024 ARMCX2Q7L311 632 aa13.56□□□□□ -0.24
PPFIA1-220ENST00000532024 TBC1D5Q92609 795 aa13.56□□□□□ -0.24
PPFIA1-220ENST00000532024 ABHD8Q96I13 439 aa13.56□□□□□ -0.24
PPFIA1-220ENST00000532024 ABHD16BQ9H3Z7 469 aa13.56□□□□□ -0.24
PPFIA1-220ENST00000532024 PXMP2Q9NR77 195 aa13.56□□□□□ -0.24
PPFIA1-220ENST00000532024 SMCHD1A6NHR9 2005 aa13.56□□□□□ -0.24
PPFIA1-220ENST00000532024 MEIS2O14770 477 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 EIF2AK2P19525 551 aaKnown RBP13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 CCND2P30279 289 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 CUL4AQ13619 759 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 STXBP2Q15833 593 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 UBE2SQ16763 222 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 TYW1BQ6NUM6 668 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 XRRA1Q6P2D8 792 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 DAGLBQ8NCG7 672 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 ARMC5Q96C12 935 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 INTS4Q96HW7 963 aaKnown RBP13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 C8orf76Q96K31 380 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 TAAR1Q96RJ0 339 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 HMX1Q9NP08 348 aaPredicted RBP13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 VTA1Q9NP79 307 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 FLRT1Q9NZU1 646 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 COL20A1Q9P218 1284 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 PCDHA4Q9UN74 947 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 RPTORQ8N122 1335 aa13.55□□□□□ -0.24
PPFIA1-220ENST00000532024 MSCO60682 206 aa13.54□□□□□ -0.24
PPFIA1-220ENST00000532024 STAM2O75886 525 aa13.54□□□□□ -0.24
PPFIA1-220ENST00000532024 FDPSP14324 419 aaKnown RBP13.54□□□□□ -0.24
PPFIA1-220ENST00000532024 PDCP20941 246 aa13.54□□□□□ -0.24
PPFIA1-220ENST00000532024 GNL2Q13823 731 aaKnown RBP13.54□□□□□ -0.24
PPFIA1-220ENST00000532024 BLIDQ8IZY5 108 aa13.54□□□□□ -0.24
PPFIA1-220ENST00000532024 MORC4Q8TE76 937 aa13.54□□□□□ -0.24
PPFIA1-220ENST00000532024 ZNF333Q96JL9 665 aa13.54□□□□□ -0.24
PPFIA1-220ENST00000532024 FGD4Q96M96 766 aa13.54□□□□□ -0.24
PPFIA1-220ENST00000532024 AIFM3Q96NN9 605 aa13.54□□□□□ -0.24
PPFIA1-220ENST00000532024 PDCD2LQ9BRP1 358 aa13.54□□□□□ -0.24
PPFIA1-220ENST00000532024 ZHX1Q9UKY1 873 aaPredicted RBP13.54□□□□□ -0.24
PPFIA1-220ENST00000532024 LCTP09848 1927 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 NR3C2P08235 984 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 CYBAP13498 195 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 EDNRBP24530 442 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 GJB2P29033 226 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 CNGA1P29973 690 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 KRT2P35908 639 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 RGS19P49795 217 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 CACNB2Q08289 660 aaPredicted RBP13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 ACVR2BQ13705 512 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 PGM5Q15124 567 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 GNPTABQ3T906 1256 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 MAP3K21Q5TCX8 1036 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 KRT25Q7Z3Z0 450 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 PURBQ96QR8 312 aaKnown RBP13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 PHF20Q9BVI0 1012 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 ANO3Q9BYT9 981 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 PCDHA6Q9UN73 950 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 PCDHA8Q9Y5H6 950 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 FRMPD4Q14CM0 1322 aa13.53□□□□□ -0.24
PPFIA1-220ENST00000532024 CCDC194A0A1B0GVG4 234 aa13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 H3BQV1 296 aa13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 EIF3JO75822 258 aaKnown RBP13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 MMP1P03956 469 aa13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 MYCLP12524 364 aaPredicted RBP13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 CCL5P13501 91 aa13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 AKR1A1P14550 325 aa13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 CAPN2P17655 700 aa13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 JAKMIP3Q5VZ66 844 aa13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 PCNX4Q63HM2 1172 aa13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 KRT40Q6A162 431 aa13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 SCFD2Q8WU76 684 aa13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 RNF208Q9H0X6 261 aa13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 FAM184BQ9ULE4 1060 aa13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 KCNJ14Q9UNX9 436 aa13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 ASTN1O14525 1302 aa13.52□□□□□ -0.25
PPFIA1-220ENST00000532024 LRRC37A2A6NM11 1700 aa13.51□□□□□ -0.25
PPFIA1-220ENST00000532024 SEPT4O43236 478 aa13.51□□□□□ -0.25
PPFIA1-220ENST00000532024 SNAI1O95863 264 aaPredicted RBP13.51□□□□□ -0.25
PPFIA1-220ENST00000532024 IGHA2P01877 340 aa13.51□□□□□ -0.25
PPFIA1-220ENST00000532024 SREBF1P36956 1147 aa13.51□□□□□ -0.25
PPFIA1-220ENST00000532024 ANP32AP39687 249 aaKnown RBP13.51□□□□□ -0.25
PPFIA1-220ENST00000532024 CLK2P49760 499 aaKnown RBP13.51□□□□□ -0.25
PPFIA1-220ENST00000532024 FOSBP53539 338 aa13.51□□□□□ -0.25
PPFIA1-220ENST00000532024 KCNV1Q6PIU1 500 aa13.51□□□□□ -0.25
PPFIA1-220ENST00000532024 NLRX1Q86UT6 975 aa13.51□□□□□ -0.25
PPFIA1-220ENST00000532024 VSIG10LQ86VR7 867 aa13.51□□□□□ -0.25
PPFIA1-220ENST00000532024 FBXO18Q8NFZ0 1043 aa13.51□□□□□ -0.25
PPFIA1-220ENST00000532024 CDHR1Q96JP9 859 aa13.51□□□□□ -0.25
PPFIA1-220ENST00000532024 DTNBO60941 627 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms