RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 TRPM4Q8TD43 1214 aa8.41□□□□□ -1.06
HDAC3-216ENST00000523088 ARHGAP45Q92619 1136 aa8.41□□□□□ -1.06
HDAC3-216ENST00000523088 DHX38Q92620 1227 aaKnown RBP8.41□□□□□ -1.06
HDAC3-216ENST00000523088 SLC35B4Q969S0 331 aa8.41□□□□□ -1.06
HDAC3-216ENST00000523088 KIF1BPQ96EK5 621 aa8.41□□□□□ -1.06
HDAC3-216ENST00000523088 CFAP36Q96G28 342 aa8.41□□□□□ -1.06
HDAC3-216ENST00000523088 POM121Q96HA1 1249 aa8.41□□□□□ -1.06
HDAC3-216ENST00000523088 MAML3Q96JK9 1138 aa8.41□□□□□ -1.06
HDAC3-216ENST00000523088 CAPNS2Q96L46 248 aa8.41□□□□□ -1.06
HDAC3-216ENST00000523088 APBA2Q99767 749 aa8.41□□□□□ -1.06
HDAC3-216ENST00000523088 OSBPL10Q9BXB5 764 aa8.41□□□□□ -1.06
HDAC3-216ENST00000523088 GLIS2Q9BZE0 524 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-216ENST00000523088 SRCIN1Q9C0H9 1055 aa8.41□□□□□ -1.06
HDAC3-216ENST00000523088 OSBPL5Q9H0X9 879 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-216ENST00000523088 BATF3Q9NR55 127 aa8.41□□□□□ -1.06
HDAC3-216ENST00000523088 WBP1LQ9NX94 342 aa8.41□□□□□ -1.06
HDAC3-216ENST00000523088 C9orf78Q9NZ63 289 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-216ENST00000523088 EVLQ9UI08 416 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-216ENST00000523088 TMED5Q9Y3A6 229 aa8.41□□□□□ -1.06
HDAC3-216ENST00000523088 LINC00854A0A1B0GVQ3 168 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 GRXCR2A6NFK2 248 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 LRRC10BA6NIK2 292 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 TRIM66O15016 1216 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 SLC26A4O43511 780 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 AHCYL1O43865 530 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 AKR1B10O60218 316 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 B3GALNT1O75752 331 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 AP1G2O75843 785 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 BAIAP3O94812 1187 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 SFTPCP11686 197 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 OAS2P29728 719 aaKnown RBP8.4□□□□□ -1.06
HDAC3-216ENST00000523088 MCM4P33991 863 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 ZNF76P36508 570 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 PEX5P50542 639 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 HIRAP54198 1017 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-216ENST00000523088 NUCB1Q02818 461 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 E2F4Q16254 413 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 CST9Q5W186 159 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 TSHZ3Q63HK5 1081 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 ZNF804AQ7Z570 1209 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 DCLK2Q8N568 766 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 C2orf69Q8N8R5 385 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 TRPC4APQ8TEL6 797 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 PBXIP1Q96AQ6 731 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 ARMC5Q96C12 935 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 SAAL1Q96ER3 474 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 GPR101Q96P66 508 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-216ENST00000523088 TNMDQ9H2S6 317 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 SEMA4AQ9H3S1 761 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 TYW1Q9NV66 732 aaKnown RBP8.4□□□□□ -1.06
HDAC3-216ENST00000523088 TFIP11Q9UBB9 837 aaKnown RBP8.4□□□□□ -1.06
HDAC3-216ENST00000523088 PCDHGB3Q9Y5G1 929 aa8.4□□□□□ -1.06
HDAC3-216ENST00000523088 MYH13Q9UKX3 1938 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 UTYO14607 1347 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 H0YC42 278 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 TRAF5O00463 557 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 SPTLC2O15270 562 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 RPS6KA5O75582 802 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 STAMBPO95630 424 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 RECKO95980 971 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 PYGLP06737 847 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 ATF7P17544 494 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-216ENST00000523088 PLA2G4AP47712 749 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 TPD52P55327 224 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-216ENST00000523088 SLC8A3P57103 927 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 FKBP1AP62942 108 aaKnown RBP8.39□□□□□ -1.07
HDAC3-216ENST00000523088 CHRNDQ07001 517 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 LAMB3Q13751 1172 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 SLFNL1Q499Z3 407 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 KIAA1614Q5VZ46 1190 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 ARMC3Q5W041 872 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 RCSD1Q6JBY9 416 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 OLFML1Q6UWY5 402 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 TAS1R3Q7RTX0 852 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 SAMD7Q7Z3H4 446 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 TRIM58Q8NG06 486 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 APPBP2Q92624 585 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 GMLQ99445 158 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 BHMT2Q9H2M3 363 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 PIF1Q9H611 641 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 ZNF408Q9H9D4 720 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 GBA2Q9HCG7 927 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-216ENST00000523088 MYOZ2Q9NPC6 264 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 RIC8AQ9NPQ8 531 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 GGA3Q9NZ52 723 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 BIN2Q9UBW5 565 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-216ENST00000523088 MYO6Q9UM54 1294 aa8.39□□□□□ -1.07
HDAC3-216ENST00000523088 GOLGA6L4A6NEF3 574 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 TMEM221A6NGB7 291 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 FOXN1O15353 648 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 FIBPO43427 364 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 PDGFRBP09619 1106 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 MCM3P25205 808 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 HSPA4P34932 840 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 GNL1P36915 607 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-216ENST00000523088 GNALP38405 381 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 FNTAP49354 379 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 CCNHP51946 323 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-216ENST00000523088 KIF11P52732 1056 aa8.38□□□□□ -1.07
HDAC3-216ENST00000523088 MARSP56192 900 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms