RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 Q6ZUG5 572 aa18.95■□□□□ 0.62
PABPC1-221ENST00000522720 PCSK9Q8NBP7 692 aaKnown RBP18.95■□□□□ 0.62
PABPC1-221ENST00000522720 WDR11Q9BZH6 1224 aa18.95■□□□□ 0.62
PABPC1-221ENST00000522720 AP5M1Q9H0R1 490 aa18.95■□□□□ 0.62
PABPC1-221ENST00000522720 RBM28Q9NW13 759 aaKnown RBP18.95■□□□□ 0.62
PABPC1-221ENST00000522720 GCOM1H8Y6P7 765 aaPredicted RBP18.94■□□□□ 0.62
PABPC1-221ENST00000522720 DYNC1LI2O43237 492 aaPredicted RBP18.94■□□□□ 0.62
PABPC1-221ENST00000522720 POLR2MP0CAP2 368 aa18.94■□□□□ 0.62
PABPC1-221ENST00000522720 CASTP20810 708 aaKnown RBP18.94■□□□□ 0.62
PABPC1-221ENST00000522720 RTN1Q16799 776 aa18.94■□□□□ 0.62
PABPC1-221ENST00000522720 DUSP28Q4G0W2 176 aa18.94■□□□□ 0.62
PABPC1-221ENST00000522720 GNASQ5JWF2 1037 aa18.94■□□□□ 0.62
PABPC1-221ENST00000522720 C1orf53Q5VUE5 145 aa18.94■□□□□ 0.62
PABPC1-221ENST00000522720 ARHGEF16Q5VV41 709 aa18.94■□□□□ 0.62
PABPC1-221ENST00000522720 TLK2Q86UE8 772 aa18.94■□□□□ 0.62
PABPC1-221ENST00000522720 CCDC82Q8N4S0 544 aa18.94■□□□□ 0.62
PABPC1-221ENST00000522720 AGXT2Q9BYV1 514 aa18.94■□□□□ 0.62
PABPC1-221ENST00000522720 PXMP2Q9NR77 195 aa18.94■□□□□ 0.62
PABPC1-221ENST00000522720 A0A1W2PQ45 241 aaPredicted RBP18.93■□□□□ 0.62
PABPC1-221ENST00000522720 A0A1W2PQY0 241 aa18.93■□□□□ 0.62
PABPC1-221ENST00000522720 EIF2AK2P19525 551 aaKnown RBP18.93■□□□□ 0.62
PABPC1-221ENST00000522720 HOXA13P31271 388 aaPredicted RBP18.93■□□□□ 0.62
PABPC1-221ENST00000522720 RTP1P59025 263 aa18.93■□□□□ 0.62
PABPC1-221ENST00000522720 PPP2R5BQ15173 497 aa18.93■□□□□ 0.62
PABPC1-221ENST00000522720 STXBP2Q15833 593 aa18.93■□□□□ 0.62
PABPC1-221ENST00000522720 SCFD2Q8WU76 684 aa18.93■□□□□ 0.62
PABPC1-221ENST00000522720 BRF1Q92994 677 aa18.93■□□□□ 0.62
PABPC1-221ENST00000522720 ZSWIM6Q9HCJ5 1215 aa18.93■□□□□ 0.62
PABPC1-221ENST00000522720 FAM217BQ9NTX9 383 aaPredicted RBP18.93■□□□□ 0.62
PABPC1-221ENST00000522720 ASGR1P07306 291 aa18.92■□□□□ 0.62
PABPC1-221ENST00000522720 NR3C2P08235 984 aa18.92■□□□□ 0.62
PABPC1-221ENST00000522720 PTGS1P23219 599 aa18.92■□□□□ 0.62
PABPC1-221ENST00000522720 BEX3Q00994 111 aa18.92■□□□□ 0.62
PABPC1-221ENST00000522720 APOBRQ0VD83 1088 aa18.92■□□□□ 0.62
PABPC1-221ENST00000522720 FUT2Q10981 343 aa18.92■□□□□ 0.62
PABPC1-221ENST00000522720 RUFY3Q7L099 469 aa18.92■□□□□ 0.62
PABPC1-221ENST00000522720 PDCD2LQ9BRP1 358 aa18.92■□□□□ 0.62
PABPC1-221ENST00000522720 TM6SF1Q9BZW5 370 aa18.92■□□□□ 0.62
PABPC1-221ENST00000522720 ZMYND8Q9ULU4 1186 aaPredicted RBP18.92■□□□□ 0.62
PABPC1-221ENST00000522720 KIAA1217Q5T5P2 1943 aa18.92■□□□□ 0.62
PABPC1-221ENST00000522720 hCG_1642624A0A1W2PR95 340 aa18.91■□□□□ 0.62
PABPC1-221ENST00000522720 GOLGA8AA7E2F4 631 aa18.91■□□□□ 0.62
PABPC1-221ENST00000522720 GOLGA8BA8MQT2 603 aa18.91■□□□□ 0.62
PABPC1-221ENST00000522720 NKRFO15226 690 aaKnown RBP eCLIP18.91■□□□□ 0.62
PABPC1-221ENST00000522720 EIF3JO75822 258 aaKnown RBP18.91■□□□□ 0.62
PABPC1-221ENST00000522720 FSCN1Q16658 493 aaKnown RBP18.91■□□□□ 0.62
PABPC1-221ENST00000522720 FCHSD1Q86WN1 690 aa18.91■□□□□ 0.62
PABPC1-221ENST00000522720 GLT1D1Q96MS3 346 aa18.91■□□□□ 0.62
PABPC1-221ENST00000522720 STARD7Q9NQZ5 370 aa18.91■□□□□ 0.62
PABPC1-221ENST00000522720 NAP1L2Q9ULW6 460 aaPredicted RBP18.91■□□□□ 0.62
PABPC1-221ENST00000522720 ATP11BQ9Y2G3 1177 aa18.91■□□□□ 0.62
PABPC1-221ENST00000522720 CYP46A1Q9Y6A2 500 aa18.91■□□□□ 0.62
PABPC1-221ENST00000522720 ELP1O95163 1332 aa18.91■□□□□ 0.62
PABPC1-221ENST00000522720 TRIOBPQ9H2D6 2365 aa18.91■□□□□ 0.62
PABPC1-221ENST00000522720 CCDC196A0A1B0GTZ2 297 aa18.9■□□□□ 0.62
PABPC1-221ENST00000522720 TXNP10599 105 aaKnown RBP18.9■□□□□ 0.62
PABPC1-221ENST00000522720 SYN1P17600 705 aa18.9■□□□□ 0.62
PABPC1-221ENST00000522720 CDC27P30260 824 aa18.9■□□□□ 0.62
PABPC1-221ENST00000522720 METAP2P50579 478 aaKnown RBP eCLIP18.9■□□□□ 0.626e-37■■■□□ 17.1
PABPC1-221ENST00000522720 EVCP57679 992 aa18.9■□□□□ 0.62
PABPC1-221ENST00000522720 TTLL4Q14679 1199 aa18.9■□□□□ 0.62
PABPC1-221ENST00000522720 TRIM60Q495X7 471 aa18.9■□□□□ 0.62
PABPC1-221ENST00000522720 CCDC62Q6P9F0 684 aa18.9■□□□□ 0.62
PABPC1-221ENST00000522720 VSIG10LQ86VR7 867 aa18.9■□□□□ 0.62
PABPC1-221ENST00000522720 COLQQ9Y215 455 aaPredicted RBP18.9■□□□□ 0.62
PABPC1-221ENST00000522720 CNTNAP5Q8WYK1 1306 aa18.9■□□□□ 0.62
PABPC1-221ENST00000522720 PIK3CDO00329 1044 aa18.89■□□□□ 0.61
PABPC1-221ENST00000522720 ZEB2O60315 1214 aa18.89■□□□□ 0.61
PABPC1-221ENST00000522720 EIF5BO60841 1220 aaKnown RBP18.89■□□□□ 0.61
PABPC1-221ENST00000522720 ADD1P35611 737 aaKnown RBP18.89■□□□□ 0.61
PABPC1-221ENST00000522720 TLE2Q04725 743 aa18.89■□□□□ 0.61
PABPC1-221ENST00000522720 CHRDL2Q6WN34 429 aa18.89■□□□□ 0.61
PABPC1-221ENST00000522720 SEPT14Q6ZU15 432 aa18.89■□□□□ 0.61
PABPC1-221ENST00000522720 PRO3102Q9H379 93 aa18.89■□□□□ 0.61
PABPC1-221ENST00000522720 PSTPIP2Q9H939 334 aa18.89■□□□□ 0.61
PABPC1-221ENST00000522720 V9GY48 417 aaPredicted RBP18.89■□□□□ 0.61
PABPC1-221ENST00000522720 RANBP2P49792 3224 aaKnown RBP18.88■□□□□ 0.61
PABPC1-221ENST00000522720 MEIS2O14770 477 aa18.88■□□□□ 0.61
PABPC1-221ENST00000522720 CABYRO75952 493 aa18.88■□□□□ 0.61
PABPC1-221ENST00000522720 ARIH2O95376 493 aa18.88■□□□□ 0.61
PABPC1-221ENST00000522720 MYCLP12524 364 aaPredicted RBP18.88■□□□□ 0.61
PABPC1-221ENST00000522720 PGM5Q15124 567 aa18.88■□□□□ 0.61
PABPC1-221ENST00000522720 USP17L6PQ6QN14 398 aa18.88■□□□□ 0.61
PABPC1-221ENST00000522720 CXCL17Q6UXB2 119 aa18.88■□□□□ 0.61
PABPC1-221ENST00000522720 OR6J1Q8NGC5 347 aa18.88■□□□□ 0.61
PABPC1-221ENST00000522720 IL31RAQ8NI17 732 aa18.88■□□□□ 0.61
PABPC1-221ENST00000522720 CUL5Q93034 780 aa18.88■□□□□ 0.61
PABPC1-221ENST00000522720 VTI1AQ96AJ9 217 aa18.88■□□□□ 0.61
PABPC1-221ENST00000522720 UPF3BQ9BZI7 483 aaKnown RBP18.88■□□□□ 0.61
PABPC1-221ENST00000522720 NID2Q14112 1375 aa18.88■□□□□ 0.61
PABPC1-221ENST00000522720 CCND2P30279 289 aa18.87■□□□□ 0.61
PABPC1-221ENST00000522720 CDK7P50613 346 aa18.87■□□□□ 0.61
PABPC1-221ENST00000522720 ANAPC15P60006 121 aa18.87■□□□□ 0.61
PABPC1-221ENST00000522720 TOB2Q14106 344 aaPredicted RBP18.87■□□□□ 0.61
PABPC1-221ENST00000522720 FRMPD4Q14CM0 1322 aa18.87■□□□□ 0.61
PABPC1-221ENST00000522720 ANKRD33Q7Z3H0 272 aa18.87■□□□□ 0.61
PABPC1-221ENST00000522720 HEATR3Q7Z4Q2 680 aa18.87■□□□□ 0.61
PABPC1-221ENST00000522720 SMARCC2Q8TAQ2 1214 aa18.87■□□□□ 0.61
PABPC1-221ENST00000522720 COPS5Q92905 334 aa18.87■□□□□ 0.61
PABPC1-221ENST00000522720 TOX2Q96NM4 488 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms