RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 TMEM201Q5SNT2 666 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 LRFN4Q6PJG9 635 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 CCDC149Q6ZUS6 474 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 MAMDC2Q7Z304 686 aaPredicted RBP4.8□□□□□ -1.64
SKP1-209ENST00000522552 TBC1D1Q86TI0 1168 aaPredicted RBP4.8□□□□□ -1.64
SKP1-209ENST00000522552 DDX53Q86TM3 631 aaKnown RBP4.8□□□□□ -1.64
SKP1-209ENST00000522552 TMEM192Q8IY95 271 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 FAM26EQ8N5C1 309 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 CCDC155Q8N6L0 562 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 KIAA1958Q8N8K9 716 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 BVESQ8NE79 360 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 SLC6A18Q96N87 628 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 APOL5Q9BWW9 433 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 RASSF4Q9H2L5 321 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 FAM204AQ9H8W3 233 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 DISC1Q9NRI5 854 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 THG1LQ9NWX6 298 aaKnown RBP4.8□□□□□ -1.64
SKP1-209ENST00000522552 PDP2Q9P2J9 529 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 GJD2Q9UKL4 321 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 TPCN1Q9ULQ1 816 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 INVSQ9Y283 1065 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 LRCH1Q9Y2L9 728 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 PCDHA9Q9Y5H5 950 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 ERBB4Q15303 1308 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.8□□□□□ -1.64
SKP1-209ENST00000522552 KLHL33A6NCF5 533 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 H3BM21 787 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 NFKB1P19838 968 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 AKAP5P24588 427 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 ATP11AP98196 1134 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 MPP1Q00013 466 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 APBA1Q02410 837 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 BTKQ06187 659 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 PPFIA1Q13136 1202 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 LAMC2Q13753 1193 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 TAF11Q15544 211 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 TERF2Q15554 542 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 SF1Q15637 639 aaKnown RBP4.8□□□□□ -1.64
SKP1-209ENST00000522552 NBPF8Q3BBV2 869 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 SYDE1Q6ZW31 735 aaPredicted RBP4.8□□□□□ -1.64
SKP1-209ENST00000522552 OVCH2Q7RTZ1 564 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 CMIPQ8IY22 773 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 SLC16A10Q8TF71 515 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 CHTF18Q8WVB6 975 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 BTN2A2Q8WVV5 523 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 BSNDQ8WZ55 320 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 MRGPRX3Q96LB0 322 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 DHRS1Q96LJ7 313 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 TEKT5Q96M29 485 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 FAM193BQ96PV7 902 aaPredicted RBP4.8□□□□□ -1.64
SKP1-209ENST00000522552 PBX4Q9BYU1 374 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 ARFGAP3Q9NP61 516 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 KMT5AQ9NQR1 393 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 SMYD2Q9NRG4 433 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 POLHQ9Y253 713 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 AFG3L2Q9Y4W6 797 aa4.8□□□□□ -1.64
SKP1-209ENST00000522552 ASXL2Q76L83 1435 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 ITIH6Q6UXX5 1313 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 A0A1B0GTH6 734 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 CDC14CA4D256 554 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 H2AFYO75367 372 aaKnown RBP4.79□□□□□ -1.64
SKP1-209ENST00000522552 CD4P01730 458 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 NCAM1P13591 858 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 SESN3P58005 492 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 SFSWAPQ12872 951 aaKnown RBP4.79□□□□□ -1.64
SKP1-209ENST00000522552 PRKG2Q13237 762 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 IFIT5Q13325 482 aaKnown RBP4.79□□□□□ -1.64
SKP1-209ENST00000522552 SEMA5AQ13591 1074 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 KIAA0753Q2KHM9 967 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 ATAT1Q5SQI0 421 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 VPS53Q5VIR6 699 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 AGAP9Q5VTM2 703 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 RETSATQ6NUM9 610 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 C11orf74Q86VG3 221 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 PTRH1Q86Y79 214 aaKnown RBP4.79□□□□□ -1.64
SKP1-209ENST00000522552 OR2C3Q8N628 320 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 GPBAR1Q8TDU6 330 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 SECISBP2LQ93073 1101 aaKnown RBP4.79□□□□□ -1.64
SKP1-209ENST00000522552 RIPOR3Q96MK2 946 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 GAS2L1Q99501 681 aaPredicted RBP4.79□□□□□ -1.64
SKP1-209ENST00000522552 POP1Q99575 1024 aaKnown RBP4.79□□□□□ -1.64
SKP1-209ENST00000522552 VPS11Q9H270 941 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 SH3GLB2Q9NR46 395 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 CWC25Q9NXE8 425 aaPredicted RBP4.79□□□□□ -1.64
SKP1-209ENST00000522552 RTEL1Q9NZ71 1219 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 GPRC5BQ9NZH0 403 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 CDC23Q9UJX2 597 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 ZKSCAN5Q9Y2L8 839 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 TMX2Q9Y320 296 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 SNCAIPQ9Y6H5 919 aa4.79□□□□□ -1.64
SKP1-209ENST00000522552 SLC35F4A4IF30 521 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 WDR64B1ANS9 1081 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 EYA2O00167 538 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 TRAF5O00463 557 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 GSTP1P09211 210 aaKnown RBP4.78□□□□□ -1.64
SKP1-209ENST00000522552 ADD2P35612 726 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 PPM1AP35813 382 aa4.78□□□□□ -1.64
SKP1-209ENST00000522552 STT3AP46977 705 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms