RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 TMEM192Q8IY95 271 aa13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 ADSSL1Q8N142 457 aa13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 BCL11AQ9H165 835 aa13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 CD207Q9UJ71 328 aa13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 FEM1BQ9UK73 627 aa13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 CACNA1HO95180 2353 aa13.24□□□□□ -0.29
CTNNA1-234ENST00000522227 TBX10O75333 385 aa13.23□□□□□ -0.29
CTNNA1-234ENST00000522227 PDGFBP01127 241 aaPredicted RBP13.23□□□□□ -0.29
CTNNA1-234ENST00000522227 COL19A1Q14993 1142 aa13.23□□□□□ -0.29
CTNNA1-234ENST00000522227 YME1L1Q96TA2 773 aa13.23□□□□□ -0.29
CTNNA1-234ENST00000522227 SCN10AQ9Y5Y9 1956 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 TMEM232C9JQI7 657 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 PROB1E7EW31 1015 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 CXCL10P02778 98 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 AMHP03971 560 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 CKBP12277 381 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 NDUFV1P49821 464 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 OAZ1P54368 228 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 PTPN11Q06124 597 aaPredicted RBP13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 SIGLEC14Q08ET2 396 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 FRMD5Q7Z6J6 570 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 FBXO11Q86XK2 927 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 LRRC47Q8N1G4 583 aaKnown RBP13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 SAMD11Q96NU1 681 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 CTAGE1Q96RT6 745 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 DNAJC2Q99543 621 aaKnown RBP13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 CYP39A1Q9NYL5 469 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 TNNQ9UQP3 1299 aa13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 RIF1Q5UIP0 2472 aaKnown RBP13.22□□□□□ -0.29
CTNNA1-234ENST00000522227 RAD50Q92878 1312 aa13.21□□□□□ -0.29
CTNNA1-234ENST00000522227 FAM186AA6NE01 2351 aa13.21□□□□□ -0.29
CTNNA1-234ENST00000522227 GOLIM4O00461 696 aa13.21□□□□□ -0.29
CTNNA1-234ENST00000522227 EFCAB14O75071 495 aa13.21□□□□□ -0.29
CTNNA1-234ENST00000522227 CTNNB1P35222 781 aa13.21□□□□□ -0.29
CTNNA1-234ENST00000522227 CTC1Q2NKJ3 1217 aa13.21□□□□□ -0.29
CTNNA1-234ENST00000522227 ASIC4Q96FT7 647 aa13.21□□□□□ -0.29
CTNNA1-234ENST00000522227 RPGRIP1Q96KN7 1286 aa13.21□□□□□ -0.29
CTNNA1-234ENST00000522227 CNTNAP3BQ96NU0 1288 aa13.21□□□□□ -0.29
CTNNA1-234ENST00000522227 CNTNAP3Q9BZ76 1288 aa13.21□□□□□ -0.29
CTNNA1-234ENST00000522227 INCENPQ9NQS7 918 aa13.21□□□□□ -0.29
CTNNA1-234ENST00000522227 ATP8A2Q9NTI2 1148 aa13.21□□□□□ -0.29
CTNNA1-234ENST00000522227 NYAP2Q9P242 653 aa13.21□□□□□ -0.29
CTNNA1-234ENST00000522227 TCRBV5S4A2TA0A5A2 114 aa13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 GRM6O15303 877 aa13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 GALR2O43603 387 aaPredicted RBP13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 NCK2O43639 380 aa13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 BMP3P12645 472 aa13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 HTRA4P83105 476 aaPredicted RBP13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 PPP2R5BQ15173 497 aa13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 ZNF618Q5T7W0 954 aa13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 CTR9Q6PD62 1173 aa13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 AACSQ86V21 672 aa13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 DBF4BQ8NFT6 615 aa13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 NKD2Q969F2 451 aaPredicted RBP13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 DDRGK1Q96HY6 314 aa13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 MKNK2Q9HBH9 465 aa13.2□□□□□ -0.3
CTNNA1-234ENST00000522227 LOC730098B7Z3J9 87 aa13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 KPNA6O60684 536 aa13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 LGR5O75473 907 aa13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 CHGBP05060 677 aa13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 RASA1P20936 1047 aa13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 ALDH5A1P51649 535 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 PDE4BQ07343 736 aa13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 BAATQ14032 418 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 POLA2Q14181 598 aa13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 MBTPS1Q14703 1052 aa13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 TTF1Q15361 905 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 SLFN13Q68D06 897 aa13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 TMED8Q6PL24 325 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 DGLUCYQ7Z3D6 616 aa13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 WNT8BQ93098 351 aa13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 ALG1Q9BT22 464 aa13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 C1orf115Q9H7X2 142 aa13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 SLC4A4Q9Y6R1 1079 aa13.19□□□□□ -0.3
CTNNA1-234ENST00000522227 DCHS1Q96JQ0 3298 aa13.18□□□□□ -0.3
CTNNA1-234ENST00000522227 A6NJR5 290 aa13.18□□□□□ -0.3
CTNNA1-234ENST00000522227 PARNO95453 639 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-234ENST00000522227 NBL1P41271 181 aa13.18□□□□□ -0.3
CTNNA1-234ENST00000522227 RRP1P56182 461 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-234ENST00000522227 ZNF200P98182 395 aaPredicted RBP13.18□□□□□ -0.3
CTNNA1-234ENST00000522227 SLFN5Q08AF3 891 aa13.18□□□□□ -0.3
CTNNA1-234ENST00000522227 TKFCQ3LXA3 575 aa13.18□□□□□ -0.3
CTNNA1-234ENST00000522227 CHST3Q7LGC8 479 aa13.18□□□□□ -0.3
CTNNA1-234ENST00000522227 ZBTB33Q86T24 672 aa13.18□□□□□ -0.3
CTNNA1-234ENST00000522227 CLUAP1Q96AJ1 413 aa13.18□□□□□ -0.3
CTNNA1-234ENST00000522227 RMDN1Q96DB5 314 aa13.18□□□□□ -0.3
CTNNA1-234ENST00000522227 MTMR7Q9Y216 660 aa13.18□□□□□ -0.3
CTNNA1-234ENST00000522227 ATG2AQ2TAZ0 1938 aa13.17□□□□□ -0.3
CTNNA1-234ENST00000522227 MICAL3Q7RTP6 2002 aa13.17□□□□□ -0.3
CTNNA1-234ENST00000522227 NLRC5Q86WI3 1866 aa13.17□□□□□ -0.3
CTNNA1-234ENST00000522227 PTPDC1A2A3K4 754 aa13.17□□□□□ -0.3
CTNNA1-234ENST00000522227 TXNP10599 105 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-234ENST00000522227 SP100P23497 879 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-234ENST00000522227 STAT2P52630 851 aa13.17□□□□□ -0.3
CTNNA1-234ENST00000522227 ADAM15Q13444 863 aa13.17□□□□□ -0.3
CTNNA1-234ENST00000522227 MORC4Q8TE76 937 aa13.17□□□□□ -0.3
CTNNA1-234ENST00000522227 AFG1LQ8WV93 481 aa13.17□□□□□ -0.3
CTNNA1-234ENST00000522227 HDAC6Q9UBN7 1215 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms