RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 PCDHA12Q9UN75 941 aa29.04■■■□□ 2.24
COL13A1-214ENST00000522165 FOSP01100 380 aaPredicted RBP29.03■■■□□ 2.24
COL13A1-214ENST00000522165 TAL1P17542 331 aaPredicted RBP29.03■■■□□ 2.24
COL13A1-214ENST00000522165 ASIC1P78348 528 aa29.03■■■□□ 2.24
COL13A1-214ENST00000522165 ARHGAP4P98171 946 aa29.03■■■□□ 2.24
COL13A1-214ENST00000522165 TMEM119Q4V9L6 283 aa29.03■■■□□ 2.24
COL13A1-214ENST00000522165 GJA10Q969M2 543 aa29.03■■■□□ 2.24
COL13A1-214ENST00000522165 KCNMB3Q9NPA1 279 aa29.03■■■□□ 2.24
COL13A1-214ENST00000522165 BCS1LQ9Y276 419 aa29.03■■■□□ 2.24
COL13A1-214ENST00000522165 CD2APQ9Y5K6 639 aa29.03■■■□□ 2.24
COL13A1-214ENST00000522165 TPM2P07951 284 aa29.03■■■□□ 2.24
COL13A1-214ENST00000522165 KCNJ6P48051 423 aa29.03■■■□□ 2.24
COL13A1-214ENST00000522165 TMX1Q9H3N1 280 aa29.03■■■□□ 2.24
COL13A1-214ENST00000522165 SH2D4AQ9H788 454 aa29.03■■■□□ 2.24
COL13A1-214ENST00000522165 USP27XA6NNY8 438 aa29.02■■■□□ 2.24
COL13A1-214ENST00000522165 STIM1Q13586 685 aa29.02■■■□□ 2.24
COL13A1-214ENST00000522165 RASA3Q14644 834 aa29.02■■■□□ 2.24
COL13A1-214ENST00000522165 CCAR2Q8N163 923 aaKnown RBP29.02■■■□□ 2.24
COL13A1-214ENST00000522165 CCDC112Q8NEF3 446 aa29.02■■■□□ 2.24
COL13A1-214ENST00000522165 LARP4BQ92615 738 aaKnown RBP29.02■■■□□ 2.24
COL13A1-214ENST00000522165 PRIMPOLQ96LW4 560 aa29.02■■■□□ 2.24
COL13A1-214ENST00000522165 C16orf45Q96MC5 204 aaPredicted RBP29.02■■■□□ 2.24
COL13A1-214ENST00000522165 SGIP1Q9BQI5 828 aa29.02■■■□□ 2.24
COL13A1-214ENST00000522165 EXOC1Q9NV70 894 aa29.02■■■□□ 2.24
COL13A1-214ENST00000522165 LIMA1Q9UHB6 759 aaKnown RBP29.02■■■□□ 2.24
COL13A1-214ENST00000522165 TEX33O43247 280 aa29.01■■■□□ 2.24
COL13A1-214ENST00000522165 TRAF1Q13077 416 aa29.01■■■□□ 2.24
COL13A1-214ENST00000522165 MCM6Q14566 821 aa29.01■■■□□ 2.24
COL13A1-214ENST00000522165 CHURC1Q8WUH1 139 aa29.01■■■□□ 2.24
COL13A1-214ENST00000522165 RAD54LQ92698 747 aa29.01■■■□□ 2.24
COL13A1-214ENST00000522165 LTBP3Q9NS15 1303 aa29.01■■■□□ 2.24
COL13A1-214ENST00000522165 SPDYE3A6NKU9 549 aa29.01■■■□□ 2.23
COL13A1-214ENST00000522165 EGFRP00533 1210 aa29.01■■■□□ 2.23
COL13A1-214ENST00000522165 ASNSP08243 561 aa29.01■■■□□ 2.23
COL13A1-214ENST00000522165 SREBF1P36956 1147 aa29.01■■■□□ 2.23
COL13A1-214ENST00000522165 SPAG1Q07617 926 aa29.01■■■□□ 2.23
COL13A1-214ENST00000522165 PDE4DQ08499 809 aa29.01■■■□□ 2.23
COL13A1-214ENST00000522165 R3HDM1Q15032 1099 aaKnown RBP29.01■■■□□ 2.23
COL13A1-214ENST00000522165 GTPBP4Q9BZE4 634 aaKnown RBP29.01■■■□□ 2.23
COL13A1-214ENST00000522165 LRRC10BA6NIK2 292 aa29■■■□□ 2.23
COL13A1-214ENST00000522165 H7C1D1 291 aa29■■■□□ 2.23
COL13A1-214ENST00000522165 PLA2G6O60733 806 aa29■■■□□ 2.23
COL13A1-214ENST00000522165 PIK3CDO00329 1044 aa29■■■□□ 2.23
COL13A1-214ENST00000522165 PSMA7O14818 248 aa29■■■□□ 2.23
COL13A1-214ENST00000522165 KRT31Q15323 416 aa29■■■□□ 2.23
COL13A1-214ENST00000522165 FILIP1LQ4L180 1135 aa29■■■□□ 2.23
COL13A1-214ENST00000522165 GLIS2Q9BZE0 524 aaPredicted RBP29■■■□□ 2.23
COL13A1-214ENST00000522165 RANBP17Q9H2T7 1088 aaKnown RBP29■■■□□ 2.23
COL13A1-214ENST00000522165 SCAF8Q9UPN6 1271 aaKnown RBP29■■■□□ 2.23
COL13A1-214ENST00000522165 MYMKA6NI61 221 aa28.99■■■□□ 2.23
COL13A1-214ENST00000522165 PHF20L1A8MW92 1017 aa28.99■■■□□ 2.23
COL13A1-214ENST00000522165 PBX1P40424 430 aa28.99■■■□□ 2.23
COL13A1-214ENST00000522165 GOLGA8FQ08AF8 430 aa28.99■■■□□ 2.23
COL13A1-214ENST00000522165 GOLGA8DPQ0D2H9 430 aa28.99■■■□□ 2.23
COL13A1-214ENST00000522165 TNFAIP1Q13829 316 aa28.99■■■□□ 2.23
COL13A1-214ENST00000522165 ZYXQ15942 572 aaKnown RBP28.99■■■□□ 2.23
COL13A1-214ENST00000522165 DHTKD1Q96HY7 919 aaPredicted RBP28.99■■■□□ 2.23
COL13A1-214ENST00000522165 TEPSINQ96N21 525 aa28.99■■■□□ 2.23
COL13A1-214ENST00000522165 TRIM49BA6NDI0 452 aa28.98■■■□□ 2.23
COL13A1-214ENST00000522165 PMS1P54277 932 aaKnown RBP28.98■■■□□ 2.23
COL13A1-214ENST00000522165 ECM1Q16610 540 aa28.98■■■□□ 2.23
COL13A1-214ENST00000522165 Q4G0T1 1027 aa28.98■■■□□ 2.23
COL13A1-214ENST00000522165 HYIQ5T013 277 aa28.98■■■□□ 2.23
COL13A1-214ENST00000522165 E4F1Q66K89 784 aaPredicted RBP28.98■■■□□ 2.23
COL13A1-214ENST00000522165 KCNK18Q7Z418 384 aa28.98■■■□□ 2.23
COL13A1-214ENST00000522165 TEX2Q8IWB9 1127 aa28.98■■■□□ 2.23
COL13A1-214ENST00000522165 SLFN12Q8IYM2 578 aa28.98■■■□□ 2.23
COL13A1-214ENST00000522165 HOXA13P31271 388 aaPredicted RBP28.98■■■□□ 2.23
COL13A1-214ENST00000522165 STK4Q13043 487 aa28.98■■■□□ 2.23
COL13A1-214ENST00000522165 TCP11X2Q5H9J9 407 aa28.98■■■□□ 2.23
COL13A1-214ENST00000522165 FAM160B2Q86V87 743 aa28.98■■■□□ 2.23
COL13A1-214ENST00000522165 TNNT1P13805 278 aa28.97■■■□□ 2.23
COL13A1-214ENST00000522165 GMPSP49915 693 aaPredicted RBP28.97■■■□□ 2.23
COL13A1-214ENST00000522165 ETNPPLQ8TBG4 499 aa28.97■■■□□ 2.23
COL13A1-214ENST00000522165 KIFC2Q96AC6 838 aa28.97■■■□□ 2.23
COL13A1-214ENST00000522165 TRMT1Q9NXH9 659 aaKnown RBP28.97■■■□□ 2.23
COL13A1-214ENST00000522165 SMCHD1A6NHR9 2005 aa28.97■■■□□ 2.23
COL13A1-214ENST00000522165 PVALEFA0A1B0GWK0 134 aa28.97■■■□□ 2.23
COL13A1-214ENST00000522165 KCNJ18B7U540 433 aa28.97■■■□□ 2.23
COL13A1-214ENST00000522165 RASSF7Q02833 373 aa28.97■■■□□ 2.23
COL13A1-214ENST00000522165 KCNJ12Q14500 433 aa28.97■■■□□ 2.23
COL13A1-214ENST00000522165 COBLL1Q53SF7 1204 aa28.97■■■□□ 2.23
COL13A1-214ENST00000522165 CNNM4Q6P4Q7 775 aa28.97■■■□□ 2.23
COL13A1-214ENST00000522165 CCDC84Q86UT8 332 aaPredicted RBP28.97■■■□□ 2.23
COL13A1-214ENST00000522165 TC2NQ8N9U0 490 aa28.97■■■□□ 2.23
COL13A1-214ENST00000522165 KDM3AQ9Y4C1 1321 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 UQCRHLA0A096LP55 91 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 TBX3O15119 743 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 SLC26A4O43511 780 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 UQCRHP07919 91 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 FCER1AP12319 257 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 CIITAP33076 1130 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 PPP1R2P41236 205 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 PRR16Q569H4 304 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 TTI2Q6NXR4 508 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 CCDC174Q6PII3 467 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 NYAP1Q6ZVC0 841 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 UNC13DQ70J99 1090 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 IRF2BP1Q8IU81 584 aa28.96■■■□□ 2.23
COL13A1-214ENST00000522165 TMEM139Q8IV31 216 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms