RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 STK24Q9Y6E0 443 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 SP4Q02446 784 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 WDR78Q5VTH9 848 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 SLIT2O94813 1529 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 ACTN4O43707 911 aaKnown RBP12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 ARHGAP27Q6ZUM4 889 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 USP37Q86T82 979 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 FAM107BQ9H098 131 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 PNMA6FA0A0J9YX94 578 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 TCP10L2B9ZVM9 353 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 GAS7O60861 476 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 GDF11O95390 407 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 XRCC5P13010 732 aaKnown RBP12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 GCFC2P16383 781 aaKnown RBP12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 PABPC4Q13310 644 aaKnown RBP eCLIP12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 PRR5LQ6MZQ0 368 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 NBPF11Q86T75 865 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 NEDD1Q8NHV4 660 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 RPGRIP1Q96KN7 1286 aa12.45□□□□□ -0.42
PCDHGB4-201ENST00000519479 TMEM110-MUSTN1A8MSY1 372 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 ZBED6P86452 979 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 EZH2Q15910 746 aaKnown RBP12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 RGS22Q8NE09 1264 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 TAOK3Q9H2K8 898 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 CNTNAP5Q8WYK1 1306 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 POTEMA6NI47 508 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 CACNB3P54284 484 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 FKBP3Q00688 224 aaKnown RBP12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 CYP27A1Q02318 531 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 MTF1Q14872 753 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 MAN2A1Q16706 1144 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 PARD6BQ9BYG5 372 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 ABHD10Q9NUJ1 306 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 TMEM260Q9NX78 707 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 BUB1O43683 1085 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 IVLP07476 585 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 CFAP58Q5T655 872 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 PCDHA6Q9UN73 950 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 PCDHA8Q9Y5H6 950 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 PARP4Q9UKK3 1724 aaKnown RBP12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 LGALS16A8MUM7 142 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 EXOC3O60645 756 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 DPYDQ12882 1025 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 MCTP2Q6DN12 878 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 CHURC1Q8WUH1 139 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 HOMER2Q9NSB8 354 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 ADGRG1Q9Y653 693 aa12.44□□□□□ -0.42
PCDHGB4-201ENST00000519479 PRPHP41219 470 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 SEC23AQ15436 765 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 CFAP221Q4G0U5 840 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 HINFPQ9BQA5 517 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 FAM217BQ9NTX9 383 aaPredicted RBP12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 GSTTP1A0A1W2PQM5 241 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 FLOT1O75955 427 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 ZBTB7AO95365 584 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 FOSP01100 380 aaPredicted RBP12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 SLC10A5Q5PT55 438 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 C3orf67Q6ZVT6 689 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 RDH13Q8NBN7 331 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 FAM76AQ8TAV0 307 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 SMCR8Q8TEV9 937 aaPredicted RBP12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 CSRNP1Q96S65 589 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 RIC8AQ9NPQ8 531 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 A0A1B0GTH6 734 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 TNFAIP3P21580 790 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 KCNJ6P48051 423 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 LONRF2Q1L5Z9 754 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 SND1Q7KZF4 910 aaKnown RBP eCLIP12.43□□□□□ -0.422e-7■■■■■ 27.3
PCDHGB4-201ENST00000519479 PODNQ7Z5L7 613 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 NBPF3Q9H094 633 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 NDST4Q9H3R1 872 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 PI4KBQ9UBF8 816 aa12.43□□□□□ -0.42
PCDHGB4-201ENST00000519479 MYO3BQ8WXR4 1341 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 CEP104O60308 925 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 POTEDQ86YR6 584 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 DYDC1Q8WWB3 177 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 WDR24Q96S15 920 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 DHX36Q9H2U1 1008 aaKnown RBP12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 PLEKHA4Q9H4M7 779 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 NHEJ1Q9H9Q4 299 aaPredicted RBP12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 LMO7Q8WWI1 1683 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 FAM170AA1A519 330 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 FAM196BA6NMK8 535 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 CCDC169A6NNP5 214 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 MEIS1O00470 390 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 MYCLP12524 364 aaPredicted RBP12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 NR2F2P24468 414 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 STYK1Q6J9G0 422 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 GJA10Q969M2 543 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 TSKSQ9UJT2 592 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 HYOU1Q9Y4L1 999 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 COL4A3BPQ9Y5P4 624 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 GOLGA6BA6NDN3 693 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 RASSF7Q02833 373 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 RPS6KA1Q15418 735 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 NYAP1Q6ZVC0 841 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 PAXIP1Q6ZW49 1069 aaPredicted RBP12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 TXNRD3Q86VQ6 643 aa12.42□□□□□ -0.42
PCDHGB4-201ENST00000519479 KLHL7Q8IXQ5 586 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms