RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 PORCNQ9H237 461 aa13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 A1CFQ9NQ94 594 aaKnown RBP13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 CYP39A1Q9NYL5 469 aa13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 STK24Q9Y6E0 443 aa13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 FRMPD4Q14CM0 1322 aa13.09□□□□□ -0.31
ARFGEF1-202ENST00000517955 ZNFX1Q9P2E3 1918 aaKnown RBP13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 DNAJC25-GNG10A0A024R161 153 aa13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 VPS37CA5D8V6 355 aaPredicted RBP13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 ADAMTS3O15072 1205 aa13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 F13A1P00488 732 aa13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 CFBP00751 764 aa13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 FCER1AP12319 257 aa13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 TAL1P17542 331 aaPredicted RBP13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 TRAPPC10P48553 1259 aa13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 USP17L6PQ6QN14 398 aa13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 OXER1Q8TDS5 423 aa13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 CRYGNQ8WXF5 182 aa13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 TBC1D5Q92609 795 aa13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 R3HDMLQ9H3Y0 253 aa13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 HOMER2Q9NSB8 354 aa13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 WBP1LQ9NX94 342 aa13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 ZNF236Q9UL36 1845 aa13.08□□□□□ -0.32
ARFGEF1-202ENST00000517955 SLC15A5A6NIM6 579 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 KIF28PB7ZC32 967 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 TRPA1O75762 1119 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 PTPREP23469 700 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 USP11P51784 963 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 NR5A1Q13285 461 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 BAATQ14032 418 aaPredicted RBP13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 GRB14Q14449 540 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 ATL3Q6DD88 541 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 GPR142Q7Z601 462 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 PLEKHH3Q7Z736 793 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 ANKRD35Q8N283 1001 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 FAM133AQ8N9E0 248 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 DNERQ8NFT8 737 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 EFCC1Q9HA90 598 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 BIN2Q9UBW5 565 aaPredicted RBP13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 DIS3Q9Y2L1 958 aaKnown RBP13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 ATP6V1DQ9Y5K8 247 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 RPTORQ8N122 1335 aa13.07□□□□□ -0.32
ARFGEF1-202ENST00000517955 PCNTO95613 3336 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 CCDC194A0A1B0GVG4 234 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 SPDYE3A6NKU9 549 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 TBC1D8O95759 1140 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 CYP3A4P08684 503 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 SREBF1P36956 1147 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 FOSBP53539 338 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 LACTBP83111 547 aaPredicted RBP13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 SP3Q02447 781 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 ORC2Q13416 577 aaPredicted RBP13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 KCTD2Q14681 263 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 UBE2SQ16763 222 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 RILPL1Q5EBL4 403 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 MORN1Q5T089 497 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 MCTP1Q6DN14 999 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 XRRA1Q6P2D8 792 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 NSMFQ6X4W1 530 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 CCAR1Q8IX12 1150 aaKnown RBP13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 JMYQ8N9B5 988 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 USP6NLQ92738 828 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 MMP19Q99542 508 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 EHMT1Q9H9B1 1298 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 COL20A1Q9P218 1284 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 DOCK3Q8IZD9 2030 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 MGAMO43451 1857 aa13.06□□□□□ -0.32
ARFGEF1-202ENST00000517955 PLXNB2O15031 1838 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 GPR25O00155 361 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 GNRH1P01148 92 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 HOXC6P09630 235 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 HOXA13P31271 388 aaPredicted RBP13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 CIITAP33076 1130 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 GNL2Q13823 731 aaKnown RBP13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 NONOQ15233 471 aaKnown RBP eCLIP13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 ZNF792Q3KQV3 632 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 EARS2Q5JPH6 523 aaKnown RBP13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 MYSM1Q5VVJ2 828 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 JAKMIP3Q5VZ66 844 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 MOXD1Q6UVY6 613 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 SLC30A10Q6XR72 485 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 CLEC17AQ6ZS10 378 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 RASGRP4Q8TDF6 673 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 MORC4Q8TE76 937 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 NSUN6Q8TEA1 469 aaKnown RBP13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 IWS1Q96ST2 819 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 ANO3Q9BYT9 981 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 TMEM260Q9NX78 707 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 ADD3Q9UEY8 706 aaKnown RBP13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 GJD2Q9UKL4 321 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 MORC2Q9Y6X9 1032 aaPredicted RBP13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 IVNS1ABPQ9Y6Y0 642 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 LCTP09848 1927 aa13.05□□□□□ -0.32
ARFGEF1-202ENST00000517955 MYH7BA7E2Y1 1941 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 CYP3A7-CYP3A51PA0A087WV96 503 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 EDIL3O43854 480 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 STAM2O75886 525 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 CYP3A7P24462 503 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 EDNRBP24530 442 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 FCGRTP55899 365 aa13.04□□□□□ -0.32
ARFGEF1-202ENST00000517955 PPP4R3AQ6IN85 833 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms