RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 GLDCP23378 1020 aa6.2□□□□□ -1.42
HMGB3P13-201ENST00000511263 LINC00310P59036 64 aa6.2□□□□□ -1.42
HMGB3P13-201ENST00000511263 CIAPIN1Q6FI81 312 aa6.2□□□□□ -1.42
HMGB3P13-201ENST00000511263 MRM1Q6IN84 353 aaKnown RBP6.2□□□□□ -1.42
HMGB3P13-201ENST00000511263 MICAL1Q8TDZ2 1067 aa6.2□□□□□ -1.42
HMGB3P13-201ENST00000511263 USP33Q8TEY7 942 aa6.2□□□□□ -1.42
HMGB3P13-201ENST00000511263 BTN2A2Q8WVV5 523 aa6.2□□□□□ -1.42
HMGB3P13-201ENST00000511263 AARSD1Q9BTE6 412 aaKnown RBP6.2□□□□□ -1.42
HMGB3P13-201ENST00000511263 SP110Q9HB58 689 aa6.2□□□□□ -1.42
HMGB3P13-201ENST00000511263 MSRB2Q9Y3D2 182 aa6.2□□□□□ -1.42
HMGB3P13-201ENST00000511263 CC2D2AQ9P2K1 1620 aa6.2□□□□□ -1.42
HMGB3P13-201ENST00000511263 TRAV20A0A0B4J274 112 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 NUAK1O60285 661 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 HOXA5P20719 270 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 CDK11BP21127 795 aaKnown RBP6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 ECI1P42126 302 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 CTSWP56202 376 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 ERVFRD-1P60508 538 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 PPP2R2AP63151 447 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 MAP4K2Q12851 820 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 LONRF2Q1L5Z9 754 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 TIGD5Q53EQ6 642 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 ACBD5Q5T8D3 534 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 SIRT2Q8IXJ6 389 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 LZTR1Q8N653 840 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 DIO2Q92813 273 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 KCNN1Q92952 543 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 CCDC136Q96JN2 1154 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 IRF2BPLQ9H1B7 796 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 SIRT5Q9NXA8 310 aa6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 DBR1Q9UK59 544 aaKnown RBP6.19□□□□□ -1.42
HMGB3P13-201ENST00000511263 WIZO95785 1651 aa6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 CCDC85CA6NKD9 419 aa6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 SRGAP3O43295 1099 aa6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 CYBBP04839 570 aa6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 PLS3P13797 630 aa6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 RPL11P62913 178 aaKnown RBP6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 RAB3GAP1Q15042 981 aa6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 BICRALQ6AI39 1079 aa6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 PAQR3Q6TCH7 311 aa6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 TMEM52Q8NDY8 209 aa6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 PMFBP1Q8TBY8 1022 aa6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 SRPK1Q96SB4 655 aaKnown RBP6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 CDC6Q99741 560 aa6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 MCMBPQ9BTE3 642 aa6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 ZNF552Q9H707 407 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 CLEC1BQ9P126 229 aa6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 BCCIPQ9P287 314 aaKnown RBP eCLIP6.18□□□□□ -1.42
HMGB3P13-201ENST00000511263 PDS5BQ9NTI5 1447 aa6.17□□□□□ -1.42
HMGB3P13-201ENST00000511263 CFTRP13569 1480 aa6.17□□□□□ -1.42
HMGB3P13-201ENST00000511263 THBDP07204 575 aa6.17□□□□□ -1.42
HMGB3P13-201ENST00000511263 FGFR1P11362 822 aa6.17□□□□□ -1.42
HMGB3P13-201ENST00000511263 LTBRP36941 435 aa6.17□□□□□ -1.42
HMGB3P13-201ENST00000511263 GFRA1P56159 465 aa6.17□□□□□ -1.42
HMGB3P13-201ENST00000511263 SSRP1Q08945 709 aaKnown RBP6.17□□□□□ -1.42
HMGB3P13-201ENST00000511263 ZNF605Q86T29 641 aa6.17□□□□□ -1.42
HMGB3P13-201ENST00000511263 SHISA4Q96DD7 197 aa6.17□□□□□ -1.42
HMGB3P13-201ENST00000511263 NAP1L5Q96NT1 182 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P13-201ENST00000511263 DEPDC7Q96QD5 511 aa6.17□□□□□ -1.42
HMGB3P13-201ENST00000511263 PLCD4Q9BRC7 762 aa6.17□□□□□ -1.42
HMGB3P13-201ENST00000511263 SPATA9Q9BWV2 254 aa6.17□□□□□ -1.42
HMGB3P13-201ENST00000511263 TIMM13Q9Y5L4 95 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P13-201ENST00000511263 CCDC163A0A0D9SF12 145 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 TEX51A0A1B0GUA7 166 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 A0A1W2PQU0 124 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 NOTOA8MTQ0 251 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 ZBTB7AO95365 584 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 NAT1P18440 290 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 SLC9A5Q14940 896 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 ZC3H14Q6PJT7 736 aaKnown RBP6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 RSPO2Q6UXX9 243 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 NSMFQ6X4W1 530 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 CPNE8Q86YQ8 564 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 SCUBE1Q8IWY4 988 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 PPIL6Q8IXY8 311 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 NETO2Q8NC67 525 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 PEX11GQ96HA9 241 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 MRFAP1L1Q96HT8 127 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 ZFYVE21Q9BQ24 234 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 CHMP4AQ9BY43 222 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 OSBPL2Q9H1P3 480 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 TNFRSF12AQ9NP84 129 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 GPRC5CQ9NQ84 441 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 COA3Q9Y2R0 106 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 FANCIQ9NVI1 1328 aa6.16□□□□□ -1.42
HMGB3P13-201ENST00000511263 C7orf72A4D263 438 aa6.15□□□□□ -1.42
HMGB3P13-201ENST00000511263 MAPKAPK2P49137 400 aa6.15□□□□□ -1.42
HMGB3P13-201ENST00000511263 MVKQ03426 396 aa6.15□□□□□ -1.42
HMGB3P13-201ENST00000511263 SERINC3Q13530 473 aa6.15□□□□□ -1.42
HMGB3P13-201ENST00000511263 CBX2Q14781 532 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P13-201ENST00000511263 TESK1Q15569 626 aa6.15□□□□□ -1.42
HMGB3P13-201ENST00000511263 CHRNA2Q15822 529 aa6.15□□□□□ -1.42
HMGB3P13-201ENST00000511263 MROH9Q5TGP6 573 aa6.15□□□□□ -1.42
HMGB3P13-201ENST00000511263 DCP2Q8IU60 420 aaKnown RBP6.15□□□□□ -1.42
HMGB3P13-201ENST00000511263 NPLOC4Q8TAT6 608 aa6.15□□□□□ -1.42
HMGB3P13-201ENST00000511263 IER2Q9BTL4 223 aa6.15□□□□□ -1.42
HMGB3P13-201ENST00000511263 MCOLN1Q9GZU1 580 aa6.15□□□□□ -1.42
HMGB3P13-201ENST00000511263 AP5M1Q9H0R1 490 aa6.15□□□□□ -1.42
HMGB3P13-201ENST00000511263 USP35Q9P2H5 1018 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms