RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SV2CQ496J9 727 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 ARHGAP29Q52LW3 1261 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 CDCP2Q5VXM1 449 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 MMS22LQ6ZRQ5 1243 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 C1orf229Q6ZS94 237 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 FBXO11Q86XK2 927 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 FMR1NBQ8N0W7 255 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 PPM1KQ8N3J5 372 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 SDR16C5Q8N3Y7 309 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 RNF214Q8ND24 703 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 PPHLN1Q8NEY8 458 aaKnown RBP5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 ATXN2LQ8WWM7 1075 aaKnown RBP5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 CLIP3Q96DZ5 547 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 MPP4Q96JB8 637 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 LRGUKQ96M69 825 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 GBP3Q9H0R5 595 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 SLC12A5Q9H2X9 1139 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 ANLNQ9NQW6 1124 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 FAM86C1Q9NVL1 165 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 NOP53Q9NZM5 478 aaKnown RBP5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 PLXNC1O60486 1568 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 DIP2CQ9Y2E4 1556 aa5.25□□□□□ -1.57
HMGB1P21-201ENST00000502313 RPGRIP1LQ68CZ1 1315 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 A0A0A0MRY4 1105 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 TRBV23-1A0A0A0MS06 115 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 CHURC1-FNTBB4DL54 471 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 GNB5O14775 395 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 PMM2O15305 246 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 ANP32CO43423 234 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 BRINP1O60477 761 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 KPNA6O60684 536 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 DEAF1O75398 565 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 SLURP2P0DP57 97 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 PHKG2P15735 406 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 TNFAIP3P21580 790 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 ASPAP45381 313 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 RENBPP51606 427 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 USP11P51784 963 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 GPSM2P81274 684 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 KRT76Q01546 638 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 GRB10Q13322 594 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 TTLL4Q14679 1199 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 DHCR24Q15392 516 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 ANKRD34AQ69YU3 496 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 CC2D1AQ6P1N0 951 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 GET4Q7L5D6 327 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 EPM2AIP1Q7L775 607 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 MCATQ8IVS2 390 aaKnown RBP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 MRPL41Q8IXM3 137 aaKnown RBP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 CCDC144CPQ8IYA2 1237 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 SLFN12Q8IYM2 578 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 AFAP1Q8N556 730 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 SMARCC1Q92922 1105 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 GJA10Q969M2 543 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 SKA1Q96BD8 255 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 ACSF2Q96CM8 615 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 ERP27Q96DN0 273 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 CCDC74BQ96LY2 380 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 SLC6A18Q96N87 628 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 FANCD2OSQ96PS1 177 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 SLC9A7Q96T83 725 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 DPH2Q9BQC3 489 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 MRPL4Q9BYD3 311 aaKnown RBP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 MKRN2Q9H000 416 aaKnown RBP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 ARHGEF4Q9NR80 690 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 KCNK4Q9NYG8 393 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 CLIC5Q9NZA1 410 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 CRIM1Q9NZV1 1036 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 POLG2Q9UHN1 485 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 USP21Q9UK80 565 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 RCAN3Q9UKA8 241 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 MKL2Q9ULH7 1088 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 CTDP1Q9Y5B0 961 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 PCDHGB3Q9Y5G1 929 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 TNPO3Q9Y5L0 923 aaKnown RBP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 ATP10AO60312 1499 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 NCOA2Q15596 1464 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 INO80Q9ULG1 1556 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 KIDINS220Q9ULH0 1771 aa5.24□□□□□ -1.57
HMGB1P21-201ENST00000502313 ZFYVE16Q7Z3T8 1539 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 BCORL1Q5H9F3 1711 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 A0A1W2PQU0 124 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 hCG_1984214I3L0E3 225 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 AGR2O95994 175 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 TP53P04637 393 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 MYBL2P10244 700 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 PYGMP11217 842 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 TYRP1P17643 537 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 RAB6AP20340 208 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 CCND1P24385 295 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 POLR2BP30876 1174 aaKnown RBP5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 ECE1P42892 770 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 GTF2A2P52657 109 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 ZNF143P52747 638 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 PMS1P54277 932 aaKnown RBP5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 RNF4P78317 190 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 BIRC3Q13489 604 aa5.23□□□□□ -1.57
HMGB1P21-201ENST00000502313 MAP7Q14244 749 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms