RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 GALNT17Q6IS24 598 aa16.58■□□□□ 0.24
USP11-212ENST00000497179 ARMCX2Q7L311 632 aa16.58■□□□□ 0.24
USP11-212ENST00000497179 FCHSD1Q86WN1 690 aa16.58■□□□□ 0.24
USP11-212ENST00000497179 DAGLBQ8NCG7 672 aa16.58■□□□□ 0.24
USP11-212ENST00000497179 BICD2Q8TD16 824 aa16.58■□□□□ 0.24
USP11-212ENST00000497179 PHF20Q9BVI0 1012 aa16.58■□□□□ 0.24
USP11-212ENST00000497179 PXMP2Q9NR77 195 aa16.58■□□□□ 0.24
USP11-212ENST00000497179 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.58■□□□□ 0.24
USP11-212ENST00000497179 RPTORQ8N122 1335 aa16.58■□□□□ 0.24
USP11-212ENST00000497179 CENPFP49454 3210 aa16.58■□□□□ 0.24
USP11-212ENST00000497179 ADAMTS3O15072 1205 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 NLRP5P59047 1200 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 TRIM32Q13049 653 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 AP3B2Q13367 1082 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 NPY5RQ15761 445 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 ARHGEF16Q5VV41 709 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 MCTP2Q6DN12 878 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 REXO1Q8N1G1 1221 aaKnown RBP16.57■□□□□ 0.24
USP11-212ENST00000497179 FAM184AQ8NB25 1140 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 INTS4Q96HW7 963 aaKnown RBP16.57■□□□□ 0.24
USP11-212ENST00000497179 IWS1Q96ST2 819 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 MPHOSPH6Q99547 160 aaKnown RBP16.57■□□□□ 0.24
USP11-212ENST00000497179 PDCD2LQ9BRP1 358 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 GJB4Q9NTQ9 266 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.57■□□□□ 0.24
USP11-212ENST00000497179 NRBP1Q9UHY1 535 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 PCDHA4Q9UN74 947 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 KCNJ14Q9UNX9 436 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 KIF3AQ9Y496 699 aa16.57■□□□□ 0.24
USP11-212ENST00000497179 SPDYE3A6NKU9 549 aa16.56■□□□□ 0.24
USP11-212ENST00000497179 B4DLN1 442 aa16.56■□□□□ 0.24
USP11-212ENST00000497179 SNAI1O95863 264 aaPredicted RBP16.56■□□□□ 0.24
USP11-212ENST00000497179 FOSP01100 380 aaPredicted RBP16.56■□□□□ 0.24
USP11-212ENST00000497179 CYBAP13498 195 aa16.56■□□□□ 0.24
USP11-212ENST00000497179 PRKAR2AP13861 404 aaKnown RBP16.56■□□□□ 0.24
USP11-212ENST00000497179 EIF2AK2P19525 551 aaKnown RBP16.56■□□□□ 0.24
USP11-212ENST00000497179 UBXN2AP68543 259 aa16.56■□□□□ 0.24
USP11-212ENST00000497179 CACNB2Q08289 660 aaPredicted RBP16.56■□□□□ 0.24
USP11-212ENST00000497179 BLIDQ8IZY5 108 aa16.56■□□□□ 0.24
USP11-212ENST00000497179 ZNF333Q96JL9 665 aa16.56■□□□□ 0.24
USP11-212ENST00000497179 TMEM260Q9NX78 707 aa16.56■□□□□ 0.24
USP11-212ENST00000497179 BIN2Q9UBW5 565 aaPredicted RBP16.56■□□□□ 0.24
USP11-212ENST00000497179 SMC3Q9UQE7 1217 aa16.56■□□□□ 0.24
USP11-212ENST00000497179 DDX49Q9Y6V7 483 aaKnown RBP16.56■□□□□ 0.24
USP11-212ENST00000497179 M0R2N6 131 aa16.55■□□□□ 0.24
USP11-212ENST00000497179 GJB2P29033 226 aa16.55■□□□□ 0.24
USP11-212ENST00000497179 PDE4DQ08499 809 aa16.55■□□□□ 0.24
USP11-212ENST00000497179 TRIM29Q14134 588 aa16.55■□□□□ 0.24
USP11-212ENST00000497179 PGM5Q15124 567 aa16.55■□□□□ 0.24
USP11-212ENST00000497179 KRT40Q6A162 431 aa16.55■□□□□ 0.24
USP11-212ENST00000497179 IL31RAQ8NI17 732 aa16.55■□□□□ 0.24
USP11-212ENST00000497179 C8orf76Q96K31 380 aa16.55■□□□□ 0.24
USP11-212ENST00000497179 ANO3Q9BYT9 981 aa16.55■□□□□ 0.24
USP11-212ENST00000497179 KATNBL1Q9H079 304 aa16.55■□□□□ 0.24
USP11-212ENST00000497179 EHMT1Q9H9B1 1298 aa16.55■□□□□ 0.24
USP11-212ENST00000497179 PCDHA6Q9UN73 950 aa16.55■□□□□ 0.24
USP11-212ENST00000497179 PCDHA8Q9Y5H6 950 aa16.55■□□□□ 0.24
USP11-212ENST00000497179 MMP1P03956 469 aa16.54■□□□□ 0.24
USP11-212ENST00000497179 NR3C2P08235 984 aa16.54■□□□□ 0.24
USP11-212ENST00000497179 FOSBP53539 338 aa16.54■□□□□ 0.24
USP11-212ENST00000497179 JAKMIP3Q5VZ66 844 aa16.54■□□□□ 0.24
USP11-212ENST00000497179 VSIG10LQ86VR7 867 aa16.54■□□□□ 0.24
USP11-212ENST00000497179 TRPV1Q8NER1 839 aa16.54■□□□□ 0.24
USP11-212ENST00000497179 RASGRP4Q8TDF6 673 aa16.54■□□□□ 0.24
USP11-212ENST00000497179 ABHD16BQ9H3Z7 469 aa16.54■□□□□ 0.24
USP11-212ENST00000497179 VTA1Q9NP79 307 aa16.54■□□□□ 0.24
USP11-212ENST00000497179 CNPY2Q9Y2B0 182 aa16.54■□□□□ 0.24
USP11-212ENST00000497179 MCM3APO60318 1980 aa16.53■□□□□ 0.24
USP11-212ENST00000497179 ZNF865P0CJ78 1059 aaPredicted RBP16.53■□□□□ 0.24
USP11-212ENST00000497179 CCND2P30279 289 aa16.53■□□□□ 0.24
USP11-212ENST00000497179 SREBF1P36956 1147 aa16.53■□□□□ 0.24
USP11-212ENST00000497179 ACVR2BQ13705 512 aa16.53■□□□□ 0.24
USP11-212ENST00000497179 STXBP2Q15833 593 aa16.53■□□□□ 0.24
USP11-212ENST00000497179 PCNX4Q63HM2 1172 aa16.53■□□□□ 0.24
USP11-212ENST00000497179 XRRA1Q6P2D8 792 aa16.53■□□□□ 0.24
USP11-212ENST00000497179 FBXO18Q8NFZ0 1043 aa16.53■□□□□ 0.24
USP11-212ENST00000497179 PGBD1Q96JS3 809 aa16.53■□□□□ 0.24
USP11-212ENST00000497179 EIF3JO75822 258 aaKnown RBP16.52■□□□□ 0.24
USP11-212ENST00000497179 CCL5P13501 91 aa16.52■□□□□ 0.24
USP11-212ENST00000497179 KRT2P35908 639 aa16.52■□□□□ 0.24
USP11-212ENST00000497179 PRAMEF19Q5SWL8 479 aa16.52■□□□□ 0.24
USP11-212ENST00000497179 FBXO16Q8IX29 292 aaPredicted RBP16.52■□□□□ 0.24
USP11-212ENST00000497179 OXER1Q8TDS5 423 aa16.52■□□□□ 0.24
USP11-212ENST00000497179 CRYGNQ8WXF5 182 aa16.52■□□□□ 0.24
USP11-212ENST00000497179 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.52■□□□□ 0.24
USP11-212ENST00000497179 UNC93B1Q9H1C4 597 aa16.52■□□□□ 0.24
USP11-212ENST00000497179 BRMS1Q9HCU9 246 aa16.52■□□□□ 0.24
USP11-212ENST00000497179 HMX1Q9NP08 348 aaPredicted RBP16.52■□□□□ 0.24
USP11-212ENST00000497179 ZHX1Q9UKY1 873 aaPredicted RBP16.52■□□□□ 0.24
USP11-212ENST00000497179 STAM2O75886 525 aa16.51■□□□□ 0.23
USP11-212ENST00000497179 MYCLP12524 364 aaPredicted RBP16.51■□□□□ 0.23
USP11-212ENST00000497179 CCND3P30281 292 aaPredicted RBP16.51■□□□□ 0.23
USP11-212ENST00000497179 MRPS9P82933 396 aaKnown RBP16.51■□□□□ 0.23
USP11-212ENST00000497179 GUCY1B3Q02153 619 aa16.51■□□□□ 0.23
USP11-212ENST00000497179 BECN1Q14457 450 aa16.51■□□□□ 0.23
USP11-212ENST00000497179 MTFR1Q15390 333 aa16.51■□□□□ 0.23
USP11-212ENST00000497179 TAPT1Q6NXT6 567 aa16.51■□□□□ 0.23
USP11-212ENST00000497179 KRT25Q7Z3Z0 450 aa16.51■□□□□ 0.23
USP11-212ENST00000497179 DIS3L2Q8IYB7 885 aaKnown RBP16.51■□□□□ 0.23
USP11-212ENST00000497179 TNFRSF25Q93038 417 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms