RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 A6NJR5 290 aa27.17■■□□□ 1.94
COL27A1-208ENST00000494780 TXNP10599 105 aaKnown RBP27.17■■□□□ 1.94
COL27A1-208ENST00000494780 TTLL4Q14679 1199 aa27.17■■□□□ 1.94
COL27A1-208ENST00000494780 ADGRF4Q8IZF3 695 aa27.17■■□□□ 1.94
COL27A1-208ENST00000494780 ENAHQ8N8S7 591 aaPredicted RBP27.17■■□□□ 1.94
COL27A1-208ENST00000494780 EXOC6Q8TAG9 804 aa27.17■■□□□ 1.94
COL27A1-208ENST00000494780 YTHDC1Q96MU7 727 aaKnown RBP27.17■■□□□ 1.94
COL27A1-208ENST00000494780 PFKMP08237 780 aa27.16■■□□□ 1.94
COL27A1-208ENST00000494780 CYP2C9P11712 490 aa27.16■■□□□ 1.94
COL27A1-208ENST00000494780 NBPF20Q3BBV1 942 aa27.16■■□□□ 1.94
COL27A1-208ENST00000494780 NFRKBQ6P4R8 1299 aa27.16■■□□□ 1.94
COL27A1-208ENST00000494780 COPS5Q92905 334 aa27.16■■□□□ 1.94
COL27A1-208ENST00000494780 SCLYQ96I15 445 aa27.16■■□□□ 1.94
COL27A1-208ENST00000494780 KRT23Q9C075 422 aa27.16■■□□□ 1.94
COL27A1-208ENST00000494780 ZSWIM5Q9P217 1185 aa27.16■■□□□ 1.94
COL27A1-208ENST00000494780 SCN10AQ9Y5Y9 1956 aa27.15■■□□□ 1.94
COL27A1-208ENST00000494780 MCF2L2Q86YR7 1114 aa27.15■■□□□ 1.94
COL27A1-208ENST00000494780 PRDM12Q9H4Q4 367 aa27.15■■□□□ 1.94
COL27A1-208ENST00000494780 CNNM2Q9H8M5 875 aa27.15■■□□□ 1.94
COL27A1-208ENST00000494780 PARP1P09874 1014 aaKnown RBP27.14■■□□□ 1.94
COL27A1-208ENST00000494780 PTPN11Q06124 597 aaPredicted RBP27.14■■□□□ 1.94
COL27A1-208ENST00000494780 FAM47CQ5HY64 1035 aa27.14■■□□□ 1.94
COL27A1-208ENST00000494780 SYTL5Q8TDW5 730 aaPredicted RBP27.14■■□□□ 1.94
COL27A1-208ENST00000494780 NSUN6Q8TEA1 469 aaKnown RBP27.14■■□□□ 1.94
COL27A1-208ENST00000494780 TBC1D5Q92609 795 aa27.14■■□□□ 1.94
COL27A1-208ENST00000494780 VWCEQ96DN2 955 aa27.14■■□□□ 1.94
COL27A1-208ENST00000494780 SLC28A3Q9HAS3 691 aa27.14■■□□□ 1.94
COL27A1-208ENST00000494780 SLC4A7Q9Y6M7 1214 aa27.14■■□□□ 1.94
COL27A1-208ENST00000494780 ARIH2O95376 493 aa27.13■■□□□ 1.93
COL27A1-208ENST00000494780 QRICH1Q2TAL8 776 aa27.13■■□□□ 1.93
COL27A1-208ENST00000494780 CCDC62Q6P9F0 684 aa27.13■■□□□ 1.93
COL27A1-208ENST00000494780 USP38Q8NB14 1042 aa27.13■■□□□ 1.93
COL27A1-208ENST00000494780 TAAR1Q96RJ0 339 aa27.13■■□□□ 1.93
COL27A1-208ENST00000494780 IWS1Q96ST2 819 aa27.13■■□□□ 1.93
COL27A1-208ENST00000494780 UBAC1Q9BSL1 405 aa27.13■■□□□ 1.93
COL27A1-208ENST00000494780 NKX2-4Q9H2Z4 354 aa27.13■■□□□ 1.93
COL27A1-208ENST00000494780 MRPL11Q9Y3B7 192 aaKnown RBP27.13■■□□□ 1.93
COL27A1-208ENST00000494780 DHX16O60231 1041 aaKnown RBP27.12■■□□□ 1.93
COL27A1-208ENST00000494780 FBXO11Q86XK2 927 aa27.12■■□□□ 1.93
COL27A1-208ENST00000494780 SYMPKQ92797 1274 aaKnown RBP27.12■■□□□ 1.93
COL27A1-208ENST00000494780 JMJD4Q9H9V9 463 aa27.12■■□□□ 1.93
COL27A1-208ENST00000494780 YBX2Q9Y2T7 364 aaKnown RBP27.12■■□□□ 1.93
COL27A1-208ENST00000494780 ZBBXA8MT70 800 aa27.11■■□□□ 1.93
COL27A1-208ENST00000494780 RFC2P35250 354 aa27.11■■□□□ 1.93
COL27A1-208ENST00000494780 RMDN3Q96TC7 470 aa27.11■■□□□ 1.93
COL27A1-208ENST00000494780 COL20A1Q9P218 1284 aa27.11■■□□□ 1.93
COL27A1-208ENST00000494780 EYSQ5T1H1 3165 aa27.1■■□□□ 1.93
COL27A1-208ENST00000494780 PITPNM1O00562 1244 aa27.1■■□□□ 1.93
COL27A1-208ENST00000494780 GH1P01241 217 aa27.1■■□□□ 1.93
COL27A1-208ENST00000494780 STXBP2Q15833 593 aa27.1■■□□□ 1.93
COL27A1-208ENST00000494780 SEPT14Q6ZU15 432 aa27.1■■□□□ 1.93
COL27A1-208ENST00000494780 VAT1LQ9HCJ6 419 aa27.1■■□□□ 1.93
COL27A1-208ENST00000494780 PCDHA11Q9Y5I1 949 aa27.1■■□□□ 1.93
COL27A1-208ENST00000494780 ATP2A2P16615 1042 aaKnown RBP27.09■■□□□ 1.93
COL27A1-208ENST00000494780 IFIT1BQ5T764 474 aaKnown RBP27.09■■□□□ 1.93
COL27A1-208ENST00000494780 DEFB128Q7Z7B8 93 aa27.09■■□□□ 1.93
COL27A1-208ENST00000494780 RETREG2Q8NC44 543 aa27.09■■□□□ 1.93
COL27A1-208ENST00000494780 GBF1Q92538 1859 aa27.08■■□□□ 1.93
COL27A1-208ENST00000494780 MMP3P08254 477 aa27.08■■□□□ 1.93
COL27A1-208ENST00000494780 ACTN1P12814 892 aa27.08■■□□□ 1.93
COL27A1-208ENST00000494780 RABGGTBP53611 331 aa27.08■■□□□ 1.93
COL27A1-208ENST00000494780 ARHGAP1Q07960 439 aa27.08■■□□□ 1.93
COL27A1-208ENST00000494780 ADGRE1Q14246 886 aa27.08■■□□□ 1.93
COL27A1-208ENST00000494780 LY6KQ17RY6 165 aa27.08■■□□□ 1.93
COL27A1-208ENST00000494780 ARHGEF16Q5VV41 709 aa27.08■■□□□ 1.93
COL27A1-208ENST00000494780 AFG1LQ8WV93 481 aa27.08■■□□□ 1.93
COL27A1-208ENST00000494780 AMNQ9BXJ7 453 aa27.08■■□□□ 1.93
COL27A1-208ENST00000494780 NOD1Q9Y239 953 aa27.08■■□□□ 1.93
COL27A1-208ENST00000494780 IQCF3P0C7M6 154 aa27.07■■□□□ 1.92
COL27A1-208ENST00000494780 BFSP2Q13515 415 aa27.07■■□□□ 1.92
COL27A1-208ENST00000494780 TJAP1Q5JTD0 557 aa27.07■■□□□ 1.92
COL27A1-208ENST00000494780 STAG2Q8N3U4 1231 aa27.07■■□□□ 1.92
COL27A1-208ENST00000494780 PPP1R13LQ8WUF5 828 aa27.07■■□□□ 1.92
COL27A1-208ENST00000494780 IL25Q9H293 177 aa27.07■■□□□ 1.92
COL27A1-208ENST00000494780 EIF3JO75822 258 aaKnown RBP27.06■■□□□ 1.92
COL27A1-208ENST00000494780 SEC23AQ15436 765 aa27.06■■□□□ 1.92
COL27A1-208ENST00000494780 PPP2R2DQ66LE6 453 aa27.06■■□□□ 1.92
COL27A1-208ENST00000494780 PPM1EQ8WY54 764 aa27.06■■□□□ 1.92
COL27A1-208ENST00000494780 MYO9BQ13459 2157 aa27.06■■□□□ 1.92
COL27A1-208ENST00000494780 MYH6P13533 1939 aa27.06■■□□□ 1.92
COL27A1-208ENST00000494780 KLRF2D3W0D1 207 aa27.05■■□□□ 1.92
COL27A1-208ENST00000494780 CFBP00751 764 aa27.05■■□□□ 1.92
COL27A1-208ENST00000494780 EIF2AK2P19525 551 aaKnown RBP27.05■■□□□ 1.92
COL27A1-208ENST00000494780 CASTP20810 708 aaKnown RBP27.05■■□□□ 1.92
COL27A1-208ENST00000494780 GHRHRQ02643 423 aa27.05■■□□□ 1.92
COL27A1-208ENST00000494780 SESTD1Q86VW0 696 aa27.05■■□□□ 1.92
COL27A1-208ENST00000494780 MTMR8Q96EF0 704 aa27.05■■□□□ 1.92
COL27A1-208ENST00000494780 PXMP2Q9NR77 195 aa27.05■■□□□ 1.92
COL27A1-208ENST00000494780 MAP3K20Q9NYL2 800 aaKnown RBP27.05■■□□□ 1.92
COL27A1-208ENST00000494780 DDX41Q9UJV9 622 aaKnown RBP27.05■■□□□ 1.92
COL27A1-208ENST00000494780 KIAA1217Q5T5P2 1943 aa27.04■■□□□ 1.92
COL27A1-208ENST00000494780 SCN5AQ14524 2016 aa27.04■■□□□ 1.92
COL27A1-208ENST00000494780 NR3C2P08235 984 aa27.04■■□□□ 1.92
COL27A1-208ENST00000494780 MYOGP15173 224 aa27.04■■□□□ 1.92
COL27A1-208ENST00000494780 IGFBP4P22692 258 aa27.04■■□□□ 1.92
COL27A1-208ENST00000494780 HSD17B4P51659 736 aa27.04■■□□□ 1.92
COL27A1-208ENST00000494780 CHMP4BP1P59074 171 aa27.04■■□□□ 1.92
COL27A1-208ENST00000494780 TRDNQ13061 729 aa27.04■■□□□ 1.92
COL27A1-208ENST00000494780 PTGISQ16647 500 aa27.04■■□□□ 1.92
COL27A1-208ENST00000494780 TTC22Q5TAA0 569 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms