RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 GPR25O00155 361 aa14.22□□□□□ -0.13
SNX17-208ENST00000493711 NFIBO00712 420 aa14.22□□□□□ -0.13
SNX17-208ENST00000493711 OPLAHO14841 1288 aa14.22□□□□□ -0.13
SNX17-208ENST00000493711 U2AF2P26368 475 aaKnown RBP eCLIP14.22□□□□□ -0.13
SNX17-208ENST00000493711 PWP2Q15269 919 aaKnown RBP14.22□□□□□ -0.13
SNX17-208ENST00000493711 BRAPQ7Z569 592 aa14.22□□□□□ -0.13
SNX17-208ENST00000493711 GPR142Q7Z601 462 aa14.22□□□□□ -0.13
SNX17-208ENST00000493711 SOCS4Q8WXH5 440 aa14.22□□□□□ -0.13
SNX17-208ENST00000493711 ERO1AQ96HE7 468 aa14.22□□□□□ -0.13
SNX17-208ENST00000493711 PORCNQ9H237 461 aa14.22□□□□□ -0.13
SNX17-208ENST00000493711 A1CFQ9NQ94 594 aaKnown RBP14.22□□□□□ -0.13
SNX17-208ENST00000493711 CYP39A1Q9NYL5 469 aa14.22□□□□□ -0.13
SNX17-208ENST00000493711 ADD3Q9UEY8 706 aaKnown RBP14.22□□□□□ -0.13
SNX17-208ENST00000493711 A0A0G2JMZ2 1700 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 CCDC194A0A1B0GVG4 234 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 RIOK3O14730 519 aaKnown RBP14.21□□□□□ -0.13
SNX17-208ENST00000493711 MEIS2O14770 477 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 DTNBO60941 627 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 FKTNO75072 461 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 ZSCAN22P10073 491 aaPredicted RBP14.21□□□□□ -0.13
SNX17-208ENST00000493711 PTPREP23469 700 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 HOXD10P28358 340 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 DDIT3P35638 169 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 FOSBP53539 338 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 RPS6P62753 249 aaKnown RBP14.21□□□□□ -0.13
SNX17-208ENST00000493711 LACTBP83111 547 aaPredicted RBP14.21□□□□□ -0.13
SNX17-208ENST00000493711 GUCY1B3Q02153 619 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 BAATQ14032 418 aaPredicted RBP14.21□□□□□ -0.13
SNX17-208ENST00000493711 MCTP1Q6DN14 999 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 XRRA1Q6P2D8 792 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 NOSTRINQ8IVI9 506 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 DNERQ8NFT8 737 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 SYTL5Q8TDW5 730 aaPredicted RBP14.21□□□□□ -0.13
SNX17-208ENST00000493711 NAP1L4Q99733 375 aaKnown RBP14.21□□□□□ -0.13
SNX17-208ENST00000493711 EFCC1Q9HA90 598 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 CHMP5Q9NZZ3 219 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 TSKSQ9UJT2 592 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 MTMR6Q9Y217 621 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 ATP6V1DQ9Y5K8 247 aa14.21□□□□□ -0.13
SNX17-208ENST00000493711 BTBD18B2RXH4 712 aa14.2□□□□□ -0.14
SNX17-208ENST00000493711 TNPO2O14787 897 aaKnown RBP14.2□□□□□ -0.14
SNX17-208ENST00000493711 PEX10O60683 326 aa14.2□□□□□ -0.14
SNX17-208ENST00000493711 CLK2P49760 499 aaKnown RBP14.2□□□□□ -0.14
SNX17-208ENST00000493711 GRB14Q14449 540 aa14.2□□□□□ -0.14
SNX17-208ENST00000493711 NONOQ15233 471 aaKnown RBP eCLIP14.2□□□□□ -0.14
SNX17-208ENST00000493711 NPY5RQ15761 445 aa14.2□□□□□ -0.14
SNX17-208ENST00000493711 USP17L6PQ6QN14 398 aa14.2□□□□□ -0.14
SNX17-208ENST00000493711 NSUN6Q8TEA1 469 aaKnown RBP14.2□□□□□ -0.14
SNX17-208ENST00000493711 SHISA4Q96DD7 197 aa14.2□□□□□ -0.14
SNX17-208ENST00000493711 OCEL1Q9H607 264 aa14.2□□□□□ -0.14
SNX17-208ENST00000493711 GJB4Q9NTQ9 266 aa14.2□□□□□ -0.14
SNX17-208ENST00000493711 BIN2Q9UBW5 565 aaPredicted RBP14.2□□□□□ -0.14
SNX17-208ENST00000493711 NOL7Q9UMY1 257 aaKnown RBP14.2□□□□□ -0.14
SNX17-208ENST00000493711 PCDHA6Q9UN73 950 aa14.2□□□□□ -0.14
SNX17-208ENST00000493711 DIS3Q9Y2L1 958 aaKnown RBP14.2□□□□□ -0.14
SNX17-208ENST00000493711 PCDHA8Q9Y5H6 950 aa14.2□□□□□ -0.14
SNX17-208ENST00000493711 M0R2N6 131 aa14.19□□□□□ -0.14
SNX17-208ENST00000493711 BRD1O95696 1058 aa14.19□□□□□ -0.14
SNX17-208ENST00000493711 HOXA13P31271 388 aaPredicted RBP14.19□□□□□ -0.14
SNX17-208ENST00000493711 TRAPPC10P48553 1259 aa14.19□□□□□ -0.14
SNX17-208ENST00000493711 PRMT2P55345 433 aa14.19□□□□□ -0.14
SNX17-208ENST00000493711 UBE2SQ16763 222 aa14.19□□□□□ -0.14
SNX17-208ENST00000493711 PDCD7Q8N8D1 485 aaKnown RBP14.19□□□□□ -0.14
SNX17-208ENST00000493711 IWS1Q96ST2 819 aa14.19□□□□□ -0.14
SNX17-208ENST00000493711 NUDT12Q9BQG2 462 aa14.19□□□□□ -0.14
SNX17-208ENST00000493711 R3HDMLQ9H3Y0 253 aa14.19□□□□□ -0.14
SNX17-208ENST00000493711 RLFQ13129 1914 aa14.19□□□□□ -0.14
SNX17-208ENST00000493711 DNAJC25-GNG10A0A024R161 153 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 ECM2O94769 699 aaPredicted RBP14.18□□□□□ -0.14
SNX17-208ENST00000493711 HOXC6P09630 235 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 TAL1P17542 331 aaPredicted RBP14.18□□□□□ -0.14
SNX17-208ENST00000493711 ADORA2AP29274 412 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 SREBF1P36956 1147 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 RGS2P41220 211 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 PSMC4P43686 418 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 USP11P51784 963 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 MAP2K5Q13163 448 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 RILPL1Q5EBL4 403 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 MORN1Q5T089 497 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 JAKMIP3Q5VZ66 844 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 DPP9Q86TI2 863 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 FCHSD1Q86WN1 690 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 TRMT44Q8IYL2 757 aaKnown RBP14.18□□□□□ -0.14
SNX17-208ENST00000493711 MSL3Q8N5Y2 521 aaKnown RBP14.18□□□□□ -0.14
SNX17-208ENST00000493711 FAM133AQ8N9E0 248 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 OXER1Q8TDS5 423 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 TBC1D5Q92609 795 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 TNFRSF25Q93038 417 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 RMDN3Q96TC7 470 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 ANO3Q9BYT9 981 aa14.18□□□□□ -0.14
SNX17-208ENST00000493711 ASB14A6NK59 587 aa14.17□□□□□ -0.14
SNX17-208ENST00000493711 STAM2O75886 525 aa14.17□□□□□ -0.14
SNX17-208ENST00000493711 F13A1P00488 732 aa14.17□□□□□ -0.14
SNX17-208ENST00000493711 NR5A1Q13285 461 aa14.17□□□□□ -0.14
SNX17-208ENST00000493711 ORC2Q13416 577 aaPredicted RBP14.17□□□□□ -0.14
SNX17-208ENST00000493711 ARHGEF16Q5VV41 709 aa14.17□□□□□ -0.14
SNX17-208ENST00000493711 ATL3Q6DD88 541 aa14.17□□□□□ -0.14
SNX17-208ENST00000493711 SLC30A10Q6XR72 485 aa14.17□□□□□ -0.14
SNX17-208ENST00000493711 SCUBE2Q9NQ36 999 aa14.17□□□□□ -0.14
SNX17-208ENST00000493711 FRMPD4Q14CM0 1322 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms