RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 TBC1D9BQ66K14 1250 aa10.85□□□□□ -0.67
TSC1-207ENST00000493467 TYW1BQ6NUM6 668 aa10.85□□□□□ -0.67
TSC1-207ENST00000493467 TTI2Q6NXR4 508 aa10.85□□□□□ -0.67
TSC1-207ENST00000493467 TRAPPC11Q7Z392 1133 aa10.85□□□□□ -0.67
TSC1-207ENST00000493467 GPKOWQ92917 476 aaPredicted RBP eCLIP10.85□□□□□ -0.678e-6■■■□□ 18.6
TSC1-207ENST00000493467 TMEM60Q9H2L4 133 aa10.85□□□□□ -0.67
TSC1-207ENST00000493467 MCM9Q9NXL9 1143 aa10.85□□□□□ -0.67
TSC1-207ENST00000493467 BARHL2Q9NY43 387 aa10.85□□□□□ -0.67
TSC1-207ENST00000493467 MYO6Q9UM54 1294 aa10.85□□□□□ -0.67
TSC1-207ENST00000493467 L1RE1Q9UN81 338 aa10.85□□□□□ -0.67
TSC1-207ENST00000493467 A0A0G2JS52 829 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 TRIM49BA6NDI0 452 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 ERICH4A6NGS2 130 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 H3BQF6 201 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 ABL1P00519 1130 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 SRGNP10124 158 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 SLC35G1Q2M3R5 365 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 WDR93Q6P2C0 686 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 DZIP1Q86YF9 867 aaKnown RBP10.84□□□□□ -0.67
TSC1-207ENST00000493467 STAG2Q8N3U4 1231 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 NLRP3Q96P20 1036 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 NUP58Q9BVL2 599 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 ZSWIM4Q9H7M6 989 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 LUC7L2Q9Y383 392 aaKnown RBP10.84□□□□□ -0.67
TSC1-207ENST00000493467 SNED1Q8TER0 1413 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 RCCD1A6NED2 376 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 EIF3JO75822 258 aaKnown RBP10.84□□□□□ -0.67
TSC1-207ENST00000493467 UBA7P41226 1012 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 ILDR2Q71H61 639 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 EHBP1Q8NDI1 1231 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 RASGRP4Q8TDF6 673 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 IQCDQ96DY2 449 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 TRIM47Q96LD4 638 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 CHP1Q99653 195 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 SPZ1Q9BXG8 430 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 TFCP2L1Q9NZI6 479 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 MAGEC2Q9UBF1 373 aaPredicted RBP10.84□□□□□ -0.67
TSC1-207ENST00000493467 NARFQ9UHQ1 456 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 PCDHGC3Q9UN70 934 aa10.84□□□□□ -0.67
TSC1-207ENST00000493467 NHSQ6T4R5 1651 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 BICDL2A1A5D9 508 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 USP17L3A6NCW0 530 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 USP17L4A6NCW7 530 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 CCNE1P24864 410 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 PMS1P54277 932 aaKnown RBP10.83□□□□□ -0.68
TSC1-207ENST00000493467 PPP4CP60510 307 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 HERVK_113P62684 666 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 KRT83P78385 493 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 FIGNQ5HY92 759 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 RC3H1Q5TC82 1133 aaKnown RBP10.83□□□□□ -0.68
TSC1-207ENST00000493467 WDR59Q6PJI9 974 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 USP17L2Q6R6M4 530 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 USP17L1Q7RTZ2 530 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 KRT25Q7Z3Z0 450 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 FAM114A1Q8IWE2 563 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 WDR66Q8TBY9 1149 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 CCDC47Q96A33 483 aaKnown RBP10.83□□□□□ -0.68
TSC1-207ENST00000493467 RPGRIP1Q96KN7 1286 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 DUSP9Q99956 384 aaKnown RBP10.83□□□□□ -0.68
TSC1-207ENST00000493467 C7orf25Q9BPX7 421 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 ABCB6Q9NP58 842 aa10.83□□□□□ -0.68
TSC1-207ENST00000493467 A0A1W2PQJ5 194 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 CYTH3O43739 400 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 HOXA7P31268 230 aaPredicted RBP10.82□□□□□ -0.68
TSC1-207ENST00000493467 CYLC1P35663 651 aaPredicted RBP10.82□□□□□ -0.68
TSC1-207ENST00000493467 VSNL1P62760 191 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 GSTO1P78417 241 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 ST5P78524 1137 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 CDK17Q00537 523 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 GUCA2AQ02747 115 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 INF2Q27J81 1249 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 PAPD7Q5XG87 772 aaKnown RBP10.82□□□□□ -0.68
TSC1-207ENST00000493467 AMOTL1Q8IY63 956 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 CCDC170Q8IYT3 715 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 LRRC15Q8TF66 581 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 PTCD2Q8WV60 388 aaKnown RBP10.82□□□□□ -0.68
TSC1-207ENST00000493467 HLA-CQ95604 372 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 ZMYND12Q9H0C1 365 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 EXOC1Q9NV70 894 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 MAPK8IP1Q9UQF2 711 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 ANO9A1A5B4 782 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 PP2D1A8MPX8 630 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 EIF3CLB5ME19 914 aaKnown RBP10.82□□□□□ -0.68
TSC1-207ENST00000493467 OR52Z1P0C646 297 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 MCM3P25205 808 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 SMARCA1P28370 1054 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 CABP7Q86V35 215 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 RASSF8Q8NHQ8 419 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 P2RX5Q93086 422 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 PURBQ96QR8 312 aaKnown RBP10.82□□□□□ -0.68
TSC1-207ENST00000493467 ERGIC2Q96RQ1 377 aa10.82□□□□□ -0.68
TSC1-207ENST00000493467 EIF3CQ99613 913 aaKnown RBP10.82□□□□□ -0.68
TSC1-207ENST00000493467 USP17L15C9J2P7 530 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 USP17L10C9JJH3 530 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 USP17L13C9JLJ4 530 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 USP17L11C9JVI0 530 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 USP17L18D6R9N7 530 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 USP17L22D6RA61 530 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 USP17L17D6RBQ6 530 aa10.81□□□□□ -0.68
TSC1-207ENST00000493467 USP17L19D6RCP7 530 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms