RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 SYNRGQ9UMZ2 1314 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 KDM3AQ9Y4C1 1321 aa10.3□□□□□ -0.76
SMARCC1-208ENST00000492896 POTEMA6NI47 508 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 SLC26A4O43511 780 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 CFBP00751 764 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 RPN1P04843 607 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 ICAM1P05362 532 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 YBX3P16989 372 aaKnown RBP eCLIP10.29□□□□□ -0.762e-9■□□□□ 10.6
SMARCC1-208ENST00000492896 VCAM1P19320 739 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 ERCC5P28715 1186 aaPredicted RBP10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 HOXA13P31271 388 aaPredicted RBP10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 SEMA3FQ13275 785 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 PDIA5Q14554 519 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 Q4G0T1 1027 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 NOL9Q5SY16 702 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 C9orf131Q5VYM1 1079 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 KRT79Q5XKE5 535 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 LDHDQ86WU2 507 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 SLFN12Q8IYM2 578 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 PRPF38AQ8NAV1 312 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 ZNF280CQ8ND82 737 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 ENOX1Q8TC92 643 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 HAS1Q92839 578 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 CCDC47Q96A33 483 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 PLIN2Q99541 437 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 P2RX7Q99572 595 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 MTRQ99707 1265 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 MMTAG2Q9BU76 263 aaKnown RBP10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 TTC12Q9H892 705 aaPredicted RBP10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 KCNMB3Q9NPA1 279 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 RRAGDQ9NQL2 400 aaPredicted RBP10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 KBTBD4Q9NVX7 518 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 PNMA2Q9UL42 364 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 CCPG1Q9ULG6 757 aa10.29□□□□□ -0.76
SMARCC1-208ENST00000492896 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.29□□□□□ -0.761e-9■■■□□ 17.1
SMARCC1-208ENST00000492896 A0A0G2JMZ2 1700 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 TBX3O15119 743 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 CBFA2T2O43439 604 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 FLOT1O75955 427 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 CYP3A4P08684 503 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 FDX1P10109 184 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 PTPRAP18433 802 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 CIITAP33076 1130 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 ZNF76P36508 570 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 BACE1P56817 501 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 AMPD3Q01432 767 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 FMR1Q06787 632 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 SPP2Q13103 211 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 GRB10Q13322 594 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 KCNB1Q14721 858 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 TMEM119Q4V9L6 283 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 PRR16Q569H4 304 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 ZNF658Q5TYW1 1059 aaPredicted RBP10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 PRAMEF18Q5VWM3 479 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 FCHSD1Q86WN1 690 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 LRRC15Q8TF66 581 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 ZKSCAN4Q969J2 545 aaPredicted RBP10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 KLRG1Q96E93 195 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 C12orf42Q96LP6 360 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 PNMA5Q96PV4 448 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 RPAP3Q9H6T3 665 aaPredicted RBP10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 EMILIN3Q9NT22 766 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 PPP1R9AQ9ULJ8 1098 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 PCDHA12Q9UN75 941 aa10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 CTDP1Q9Y5B0 961 aaPredicted RBP10.28□□□□□ -0.76
SMARCC1-208ENST00000492896 C19orf81C9J6K1 198 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 ZBED4O75132 1171 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 FANCCQ00597 558 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 DGKZQ13574 1117 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 HYIQ5T013 277 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 HAUS3Q68CZ6 603 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 KLHL10Q6JEL2 608 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 MCF2L2Q86YR7 1114 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 SULF1Q8IWU6 871 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 TRMT44Q8IYL2 757 aaKnown RBP10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 ETNPPLQ8TBG4 499 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 DCPSQ96C86 337 aaKnown RBP10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 C7orf25Q9BPX7 421 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 GTPBP4Q9BZE4 634 aaKnown RBP10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 HSD3B7Q9H2F3 369 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 SLC38A10Q9HBR0 1119 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 IFNKQ9P0W0 207 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 CTNND2Q9UQB3 1225 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 RABGAP1Q9Y3P9 1069 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 NFE2L3Q9Y4A8 694 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 STK24Q9Y6E0 443 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 ZNF536O15090 1300 aa10.27□□□□□ -0.77
SMARCC1-208ENST00000492896 GOLGB1Q14789 3259 aaKnown RBP10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 PPP1R3GB7ZBB8 358 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 KLRC4O43908 158 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 SERPINC1P01008 464 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 CCT6AP40227 531 aaKnown RBP10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 HSD17B4P51659 736 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 ASIC1P78348 528 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 GHRHRQ02643 423 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 STIM1Q13586 685 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 KMT5BQ4FZB7 885 aa10.26□□□□□ -0.77
SMARCC1-208ENST00000492896 SPATA1Q5VX52 437 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms