RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 XRRA1Q6P2D8 792 aa12.75□□□□□ -0.37
CPSF7-212ENST00000489728 CCDC148Q8NFR7 591 aa12.75□□□□□ -0.37
CPSF7-212ENST00000489728 NCOA5Q9HCD5 579 aaKnown RBP12.75□□□□□ -0.37
CPSF7-212ENST00000489728 SH3GLB2Q9NR46 395 aa12.75□□□□□ -0.37
CPSF7-212ENST00000489728 PXMP2Q9NR77 195 aa12.75□□□□□ -0.37
CPSF7-212ENST00000489728 STK36Q9NRP7 1315 aa12.75□□□□□ -0.37
CPSF7-212ENST00000489728 COL20A1Q9P218 1284 aa12.75□□□□□ -0.37
CPSF7-212ENST00000489728 ZHX1Q9UKY1 873 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-212ENST00000489728 RBM47A0AV96 593 aaKnown RBP12.74□□□□□ -0.37
CPSF7-212ENST00000489728 MEIS2O14770 477 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 ST18O60284 1047 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 DUSP11O75319 330 aaKnown RBP12.74□□□□□ -0.37
CPSF7-212ENST00000489728 DEXIO95424 95 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 TFRCP02786 760 aaKnown RBP12.74□□□□□ -0.37
CPSF7-212ENST00000489728 NAPAP54920 295 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 NKX3-2P78367 333 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 CCT2P78371 535 aaKnown RBP12.74□□□□□ -0.37
CPSF7-212ENST00000489728 SSRP1Q08945 709 aaKnown RBP12.74□□□□□ -0.37
CPSF7-212ENST00000489728 STXBP2Q15833 593 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 PKN1Q16512 942 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 IQSEC1Q6DN90 963 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 UBE2Q1Q7Z7E8 422 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 ARRDC4Q8NCT1 418 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 TBC1D5Q92609 795 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 GPKOWQ92917 476 aaPredicted RBP eCLIP12.74□□□□□ -0.371e-13■■■■■ 29.7
CPSF7-212ENST00000489728 GTF3C6Q969F1 213 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 ZSCAN31Q96LW9 406 aaPredicted RBP12.74□□□□□ -0.37
CPSF7-212ENST00000489728 RIC8AQ9NPQ8 531 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 LIMCH1Q9UPQ0 1083 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 Q9Y3F1 56 aa12.74□□□□□ -0.37
CPSF7-212ENST00000489728 hCG_1642624A0A1W2PR95 340 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 DNM1LO00429 736 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 NKRFO15226 690 aaKnown RBP eCLIP12.73□□□□□ -0.37
CPSF7-212ENST00000489728 CAPN15O75808 1086 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 EIF3JO75822 258 aaKnown RBP12.73□□□□□ -0.37
CPSF7-212ENST00000489728 FOSP01100 380 aaPredicted RBP12.73□□□□□ -0.37
CPSF7-212ENST00000489728 EN2P19622 333 aaPredicted RBP12.73□□□□□ -0.37
CPSF7-212ENST00000489728 HOXA13P31271 388 aaPredicted RBP12.73□□□□□ -0.37
CPSF7-212ENST00000489728 MCM2P49736 904 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 ADCY7P51828 1080 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 SCRN1Q12765 414 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 STK3Q13188 491 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 AP3B2Q13367 1082 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 CCDC144BQ3MJ40 725 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 PRAMEF19Q5SWL8 479 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 SMARCC2Q8TAQ2 1214 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 SCFD2Q8WU76 684 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 PHKBQ93100 1093 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 PURBQ96QR8 312 aaKnown RBP12.73□□□□□ -0.37
CPSF7-212ENST00000489728 TAAR1Q96RJ0 339 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 PDCD2LQ9BRP1 358 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 SLC26A6Q9BXS9 759 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 ZMYND12Q9H0C1 365 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 EHMT1Q9H9B1 1298 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 XPNPEP3Q9NQH7 507 aa12.73□□□□□ -0.37
CPSF7-212ENST00000489728 SH2B1Q9NRF2 756 aaPredicted RBP12.73□□□□□ -0.37
CPSF7-212ENST00000489728 SPDYE3A6NKU9 549 aa12.72□□□□□ -0.37
CPSF7-212ENST00000489728 FARP2O94887 1054 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-212ENST00000489728 NR3C2P08235 984 aa12.72□□□□□ -0.37
CPSF7-212ENST00000489728 EIF2AK2P19525 551 aaKnown RBP12.72□□□□□ -0.37
CPSF7-212ENST00000489728 CST5P28325 142 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-212ENST00000489728 GNA11P29992 359 aa12.72□□□□□ -0.37
CPSF7-212ENST00000489728 CCND2P30279 289 aa12.72□□□□□ -0.37
CPSF7-212ENST00000489728 TNFAIP2Q03169 654 aa12.72□□□□□ -0.37
CPSF7-212ENST00000489728 PGM5Q15124 567 aa12.72□□□□□ -0.37
CPSF7-212ENST00000489728 ME3Q16798 604 aa12.72□□□□□ -0.37
CPSF7-212ENST00000489728 TAPT1Q6NXT6 567 aa12.72□□□□□ -0.37
CPSF7-212ENST00000489728 KCNV1Q6PIU1 500 aa12.72□□□□□ -0.37
CPSF7-212ENST00000489728 RNF180Q86T96 592 aa12.72□□□□□ -0.37
CPSF7-212ENST00000489728 BICD2Q8TD16 824 aa12.72□□□□□ -0.37
CPSF7-212ENST00000489728 WASF1Q92558 559 aa12.72□□□□□ -0.37
CPSF7-212ENST00000489728 UPF3AQ9H1J1 476 aaKnown RBP12.72□□□□□ -0.37
CPSF7-212ENST00000489728 SPC25Q9HBM1 224 aa12.72□□□□□ -0.37
CPSF7-212ENST00000489728 C6orf50Q9HD87 102 aa12.72□□□□□ -0.37
CPSF7-212ENST00000489728 KIAA1217Q5T5P2 1943 aa12.71□□□□□ -0.37
CPSF7-212ENST00000489728 SMCO2A6NFE2 343 aa12.71□□□□□ -0.37
CPSF7-212ENST00000489728 CLK2P49760 499 aaKnown RBP12.71□□□□□ -0.37
CPSF7-212ENST00000489728 GJA9P57773 515 aa12.71□□□□□ -0.37
CPSF7-212ENST00000489728 DUSP28Q4G0W2 176 aa12.71□□□□□ -0.37
CPSF7-212ENST00000489728 PCNX4Q63HM2 1172 aa12.71□□□□□ -0.37
CPSF7-212ENST00000489728 GALNT17Q6IS24 598 aa12.71□□□□□ -0.37
CPSF7-212ENST00000489728 TYW1BQ6NUM6 668 aa12.71□□□□□ -0.37
CPSF7-212ENST00000489728 USP17L6PQ6QN14 398 aa12.71□□□□□ -0.37
CPSF7-212ENST00000489728 VSIG10LQ86VR7 867 aa12.71□□□□□ -0.37
CPSF7-212ENST00000489728 FCHSD1Q86WN1 690 aa12.71□□□□□ -0.37
CPSF7-212ENST00000489728 FBXO16Q8IX29 292 aaPredicted RBP12.71□□□□□ -0.37
CPSF7-212ENST00000489728 LARP6Q9BRS8 491 aaKnown RBP12.71□□□□□ -0.37
CPSF7-212ENST00000489728 LLPHQ9BRT6 129 aaKnown RBP12.71□□□□□ -0.37
CPSF7-212ENST00000489728 TSEN34Q9BSV6 310 aaKnown RBP12.71□□□□□ -0.37
CPSF7-212ENST00000489728 GNEQ9Y223 722 aaKnown RBP12.71□□□□□ -0.37
CPSF7-212ENST00000489728 SYNRGQ9UMZ2 1314 aa12.7□□□□□ -0.38
CPSF7-212ENST00000489728 KBTBD13C9JR72 458 aa12.7□□□□□ -0.38
CPSF7-212ENST00000489728 ADAMTS4O75173 837 aa12.7□□□□□ -0.38
CPSF7-212ENST00000489728 TGFB3P10600 412 aa12.7□□□□□ -0.38
CPSF7-212ENST00000489728 COL6A1P12109 1028 aa12.7□□□□□ -0.38
CPSF7-212ENST00000489728 XBP1P17861 261 aa12.7□□□□□ -0.38
CPSF7-212ENST00000489728 ADCYAP1R1P41586 468 aa12.7□□□□□ -0.38
CPSF7-212ENST00000489728 MNX1P50219 401 aaPredicted RBP12.7□□□□□ -0.38
CPSF7-212ENST00000489728 TTLL4Q14679 1199 aa12.7□□□□□ -0.38
CPSF7-212ENST00000489728 GNPTABQ3T906 1256 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms