RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 ABHD14A-ACY1A0A1B0GW23 586 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 LINC01553A4QN01 128 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 B4DLN1 442 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 PLA2G6O60733 806 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 SLC3A2P08195 630 aaKnown RBP9.08□□□□□ -0.96
PDPN-205ENST00000487038 SELPP16109 830 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 ATP5JP18859 108 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 GNAT2P19087 354 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 MRPL12P52815 198 aaKnown RBP9.08□□□□□ -0.96
PDPN-205ENST00000487038 PDE4BQ07343 736 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 IKBKEQ14164 716 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 PTGISQ16647 500 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 SLFNL1Q499Z3 407 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 LRRC8DQ7L1W4 858 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 SPRED2Q7Z698 418 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 FBXO22Q8NEZ5 403 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 SAMD11Q96NU1 681 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 POP1Q99575 1024 aaKnown RBP9.08□□□□□ -0.96
PDPN-205ENST00000487038 PRRX2Q99811 253 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 HAUS7Q99871 368 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 PUS7LQ9H0K6 701 aaKnown RBP9.08□□□□□ -0.96
PDPN-205ENST00000487038 BCL11AQ9H165 835 aa9.08□□□□□ -0.96
PDPN-205ENST00000487038 RIF1Q5UIP0 2472 aaKnown RBP9.08□□□□□ -0.96
PDPN-205ENST00000487038 ZFHX2Q9C0A1 2572 aaPredicted RBP9.07□□□□□ -0.96
PDPN-205ENST00000487038 RBM47A0AV96 593 aaKnown RBP9.07□□□□□ -0.96
PDPN-205ENST00000487038 ST18O60284 1047 aa9.07□□□□□ -0.96
PDPN-205ENST00000487038 RAB11FIP3O75154 756 aa9.07□□□□□ -0.96
PDPN-205ENST00000487038 PRDM1O75626 825 aa9.07□□□□□ -0.96
PDPN-205ENST00000487038 ICAM1P05362 532 aa9.07□□□□□ -0.96
PDPN-205ENST00000487038 CHMP4BP1P59074 171 aa9.07□□□□□ -0.96
PDPN-205ENST00000487038 DEFB103AP81534 67 aa9.07□□□□□ -0.96
PDPN-205ENST00000487038 PDE4DQ08499 809 aa9.07□□□□□ -0.96
PDPN-205ENST00000487038 MUM1L1Q5H9M0 696 aa9.07□□□□□ -0.96
PDPN-205ENST00000487038 TMEM63BQ5T3F8 832 aa9.07□□□□□ -0.96
PDPN-205ENST00000487038 NEK9Q8TD19 979 aa9.07□□□□□ -0.96
PDPN-205ENST00000487038 SCFD2Q8WU76 684 aa9.07□□□□□ -0.96
PDPN-205ENST00000487038 PABPC5Q96DU9 382 aaKnown RBP9.07□□□□□ -0.96
PDPN-205ENST00000487038 MRPL38Q96DV4 380 aaKnown RBP9.07□□□□□ -0.96
PDPN-205ENST00000487038 INSL6Q9Y581 213 aa9.07□□□□□ -0.96
PDPN-205ENST00000487038 POTEB3A0JP26 581 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 PTPDC1A2A3K4 754 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 A6NJR5 290 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 GSG1L2A8MUP6 293 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 CXCL10P02778 98 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 AMHP03971 560 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 APPP05067 770 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 PTPN5P54829 565 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 ZP2Q05996 745 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 RBL2Q08999 1139 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 PKN1Q16512 942 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 POTEBQ6S5H4 581 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 EP400NLQ6ZTU2 488 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 TMCO2Q7Z6W1 182 aaPredicted RBP9.06□□□□□ -0.96
PDPN-205ENST00000487038 SESTD1Q86VW0 696 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 ADHFE1Q8IWW8 467 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 NEDD1Q8NHV4 660 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 STRBPQ96SI9 672 aaKnown RBP9.06□□□□□ -0.96
PDPN-205ENST00000487038 KATNAL1Q9BW62 490 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 NACAP1Q9BZK3 213 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 PNMA2Q9UL42 364 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 PRR12Q9ULL5 1215 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 STX8Q9UNK0 236 aa9.06□□□□□ -0.96
PDPN-205ENST00000487038 DDX49Q9Y6V7 483 aaKnown RBP9.06□□□□□ -0.96
PDPN-205ENST00000487038 GVINP1Q7Z2Y8 2422 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 MYO15AQ9UKN7 3530 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 H3BQ06 376 aaPredicted RBP9.05□□□□□ -0.96
PDPN-205ENST00000487038 NCK2O43639 380 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 TXNP10599 105 aaKnown RBP9.05□□□□□ -0.96
PDPN-205ENST00000487038 MCCP23508 829 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 FOXK2Q01167 660 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 BAATQ14032 418 aaPredicted RBP9.05□□□□□ -0.96
PDPN-205ENST00000487038 RCSD1Q6JBY9 416 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 RNF207Q6ZRF8 634 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 HFE2Q6ZVN8 426 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 KCTD1Q719H9 257 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 BANK1Q8NDB2 785 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 DNERQ8NFT8 737 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 APPBP2Q92624 585 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 C17orf80Q9BSJ5 609 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 NSUN3Q9H649 340 aaKnown RBP9.05□□□□□ -0.96
PDPN-205ENST00000487038 EPG5Q9HCE0 2579 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 EMSYQ7Z589 1322 aa9.05□□□□□ -0.96
PDPN-205ENST00000487038 FAM186AA6NE01 2351 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 KIAA1671Q9BY89 1806 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 C19orf67A6NJJ6 358 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 TSPY2A6NKD2 308 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 GPAA1O43292 621 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 CHGBP05060 677 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 ZFYP08048 801 aaPredicted RBP9.04□□□□□ -0.96
PDPN-205ENST00000487038 CKBP12277 381 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 CASTP20810 708 aaKnown RBP9.04□□□□□ -0.96
PDPN-205ENST00000487038 CALML3P27482 149 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 TFAP4Q01664 338 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 CCDC96Q2M329 555 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 GDF6Q6KF10 455 aaPredicted RBP9.04□□□□□ -0.96
PDPN-205ENST00000487038 FAM117BQ6P1L5 589 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 SLC30A10Q6XR72 485 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 SUGP1Q8IWZ8 645 aaKnown RBP9.04□□□□□ -0.96
PDPN-205ENST00000487038 MYOCDQ8IZQ8 938 aa9.04□□□□□ -0.96
PDPN-205ENST00000487038 C7orf31Q8N865 590 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms