RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 GPAT2Q6NUI2 795 aa9.18□□□□□ -0.94
SORT1-205ENST00000483508 CHRDL2Q6WN34 429 aa9.18□□□□□ -0.94
SORT1-205ENST00000483508 PRRT2Q7Z6L0 340 aaPredicted RBP9.18□□□□□ -0.94
SORT1-205ENST00000483508 ADGRA1Q86SQ6 560 aa9.18□□□□□ -0.94
SORT1-205ENST00000483508 TMEM139Q8IV31 216 aa9.18□□□□□ -0.94
SORT1-205ENST00000483508 REXO1L1PQ8IX06 675 aa9.18□□□□□ -0.94
SORT1-205ENST00000483508 SDR42E1Q8WUS8 393 aa9.18□□□□□ -0.94
SORT1-205ENST00000483508 TNFRSF25Q93038 417 aa9.18□□□□□ -0.94
SORT1-205ENST00000483508 BAG1Q99933 345 aaPredicted RBP9.18□□□□□ -0.94
SORT1-205ENST00000483508 TRIM34Q9BYJ4 488 aa9.18□□□□□ -0.94
SORT1-205ENST00000483508 DNAI1Q9UI46 699 aa9.18□□□□□ -0.94
SORT1-205ENST00000483508 GABRQQ9UN88 632 aa9.18□□□□□ -0.94
SORT1-205ENST00000483508 SLC45A1Q9Y2W3 748 aa9.18□□□□□ -0.94
SORT1-205ENST00000483508 AFG3L2Q9Y4W6 797 aa9.18□□□□□ -0.94
SORT1-205ENST00000483508 KIAA0100Q14667 2235 aaKnown RBP9.17□□□□□ -0.94
SORT1-205ENST00000483508 MYH8P13535 1937 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 ADGRA2Q96PE1 1338 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 SYNRGQ9UMZ2 1314 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 TMEM232C9JQI7 657 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 BCRP11274 1271 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 CALML3P27482 149 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 KIF5BP33176 963 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 FLT3LGP49771 235 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 FXR1P51114 621 aaKnown RBP eCLIP9.17□□□□□ -0.94
SORT1-205ENST00000483508 MECOMQ03112 1051 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 GRIN1Q05586 938 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 SPAG1Q07617 926 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 TROAPQ12815 778 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 PABPC4Q13310 644 aaKnown RBP eCLIP9.17□□□□□ -0.94
SORT1-205ENST00000483508 MOGSQ13724 837 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 NR1I3Q14994 352 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 TTC38Q5R3I4 469 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 CTR9Q6PD62 1173 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 TRIM65Q6PJ69 517 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 CREBRFQ8IUR6 639 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 KRT222Q8N1A0 295 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 ANKRD13CQ8N6S4 541 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 OXER1Q8TDS5 423 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 U2AF1L4Q8WU68 220 aaKnown RBP9.17□□□□□ -0.94
SORT1-205ENST00000483508 NSUN4Q96CB9 384 aaKnown RBP9.17□□□□□ -0.94
SORT1-205ENST00000483508 CCDC51Q96ER9 411 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 FAM163AQ96GL9 167 aaPredicted RBP9.17□□□□□ -0.94
SORT1-205ENST00000483508 PANX2Q96RD6 677 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 ARID3AQ99856 593 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 DDX4Q9NQI0 724 aaKnown RBP9.17□□□□□ -0.94
SORT1-205ENST00000483508 SH3GLB2Q9NR46 395 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 INTS13Q9NVM9 706 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 ARGLU1Q9NWB6 273 aaPredicted RBP9.17□□□□□ -0.94
SORT1-205ENST00000483508 VPS54Q9P1Q0 977 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 PPP2R2CQ9Y2T4 447 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 MGAMO43451 1857 aa9.17□□□□□ -0.94
SORT1-205ENST00000483508 ROBO3Q96MS0 1386 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 ITIH6Q6UXX5 1313 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 GPR75-ASB3A0A0A6YYF3 556 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 EFCAB8A8MWE9 144 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 AKR1B15C9JRZ8 316 aaPredicted RBP9.16□□□□□ -0.94
SORT1-205ENST00000483508 GTPBP6O43824 516 aaPredicted RBP9.16□□□□□ -0.94
SORT1-205ENST00000483508 EVI5O60447 810 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 FARP2O94887 1054 aaPredicted RBP9.16□□□□□ -0.94
SORT1-205ENST00000483508 SGPL1O95470 568 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 BAG3O95817 575 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 SCG2P13521 617 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 H2AFXP16104 143 aaPredicted RBP9.16□□□□□ -0.94
SORT1-205ENST00000483508 ZSCAN20P17040 1043 aaPredicted RBP9.16□□□□□ -0.94
SORT1-205ENST00000483508 CAPN2P17655 700 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 DYNLL1P63167 89 aaKnown RBP9.16□□□□□ -0.94
SORT1-205ENST00000483508 DPYDQ12882 1025 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 CUL4BQ13620 913 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 TUBB2AQ13885 445 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 TRIM14Q14142 442 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 ELF2Q15723 593 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 PFKFB3Q16875 520 aaPredicted RBP9.16□□□□□ -0.94
SORT1-205ENST00000483508 KMT5BQ4FZB7 885 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 SPECC1Q5M775 1068 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 CDKAL1Q5VV42 579 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 ARL6IP4Q66PJ3 421 aaKnown RBP9.16□□□□□ -0.94
SORT1-205ENST00000483508 SH3BP5LQ7L8J4 393 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 TEX11Q8IYF3 940 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 TC2NQ8N9U0 490 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 IQUBQ8NA54 791 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 MNS1Q8NEH6 495 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 ZNF384Q8TF68 577 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 SYMPKQ92797 1274 aaKnown RBP9.16□□□□□ -0.94
SORT1-205ENST00000483508 DHX58Q96C10 678 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 SHISA4Q96DD7 197 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 PAGE5Q96GU1 130 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 TUBB2BQ9BVA1 445 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 UNC93B1Q9H1C4 597 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 AS3MTQ9HBK9 375 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 RMND1Q9NWS8 449 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 FAM53CQ9NYF3 392 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 AGTPBP1Q9UPW5 1226 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 V9GY48 417 aaPredicted RBP9.16□□□□□ -0.94
SORT1-205ENST00000483508 DOCK1Q14185 1865 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 FOCADQ5VW36 1801 aa9.16□□□□□ -0.94
SORT1-205ENST00000483508 DDX60LQ5H9U9 1706 aaKnown RBP9.16□□□□□ -0.94
SORT1-205ENST00000483508 VWA3AA6NCI4 1184 aa9.15□□□□□ -0.94
SORT1-205ENST00000483508 FAM196BA6NMK8 535 aa9.15□□□□□ -0.94
SORT1-205ENST00000483508 USP17L5A8MUK1 530 aa9.15□□□□□ -0.94
SORT1-205ENST00000483508 USP17L12C9JPN9 530 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms