RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 HERVK_113Q902F9 699 aa13.65□□□□□ -0.22
VARS2-208ENST00000477052 YBX2Q9Y2T7 364 aaKnown RBP13.65□□□□□ -0.22
VARS2-208ENST00000477052 SUPT16HQ9Y5B9 1047 aaKnown RBP13.65□□□□□ -0.22
VARS2-208ENST00000477052 VCANP13611 3396 aa13.65□□□□□ -0.22
VARS2-208ENST00000477052 ZBBXA8MT70 800 aa13.64□□□□□ -0.23
VARS2-208ENST00000477052 SORBS3O60504 671 aa13.64□□□□□ -0.23
VARS2-208ENST00000477052 GSPT1P15170 499 aaKnown RBP13.64□□□□□ -0.23
VARS2-208ENST00000477052 IMMTQ16891 758 aaKnown RBP13.64□□□□□ -0.23
VARS2-208ENST00000477052 LY6KQ17RY6 165 aa13.64□□□□□ -0.23
VARS2-208ENST00000477052 CYB5R4Q7L1T6 521 aa13.64□□□□□ -0.23
VARS2-208ENST00000477052 CHST3Q7LGC8 479 aa13.64□□□□□ -0.23
VARS2-208ENST00000477052 SYTL5Q8TDW5 730 aaPredicted RBP13.64□□□□□ -0.23
VARS2-208ENST00000477052 MTG1Q9BT17 334 aaPredicted RBP13.64□□□□□ -0.23
VARS2-208ENST00000477052 DSCC1Q9BVC3 393 aa13.64□□□□□ -0.23
VARS2-208ENST00000477052 JMJD4Q9H9V9 463 aa13.64□□□□□ -0.23
VARS2-208ENST00000477052 GPHNQ9NQX3 736 aaPredicted RBP13.64□□□□□ -0.23
VARS2-208ENST00000477052 POLR3EQ9NVU0 708 aa13.64□□□□□ -0.23
VARS2-208ENST00000477052 TAF6LQ9Y6J9 622 aa13.64□□□□□ -0.23
VARS2-208ENST00000477052 CHD9Q3L8U1 2897 aa13.64□□□□□ -0.23
VARS2-208ENST00000477052 GBF1Q92538 1859 aa13.63□□□□□ -0.23
VARS2-208ENST00000477052 SCN5AQ14524 2016 aa13.63□□□□□ -0.23
VARS2-208ENST00000477052 TMEM265A0A087WTH1 108 aa13.63□□□□□ -0.23
VARS2-208ENST00000477052 EIF2AK2P19525 551 aaKnown RBP13.63□□□□□ -0.23
VARS2-208ENST00000477052 CPT1AP50416 773 aa13.63□□□□□ -0.23
VARS2-208ENST00000477052 AAMPQ13685 434 aa13.63□□□□□ -0.23
VARS2-208ENST00000477052 ADGRE1Q14246 886 aa13.63□□□□□ -0.23
VARS2-208ENST00000477052 TTLL4Q14679 1199 aa13.63□□□□□ -0.23
VARS2-208ENST00000477052 CCDC85BQ15834 202 aaPredicted RBP13.63□□□□□ -0.23
VARS2-208ENST00000477052 DNERQ8NFT8 737 aa13.63□□□□□ -0.23
VARS2-208ENST00000477052 SCFD2Q8WU76 684 aa13.63□□□□□ -0.23
VARS2-208ENST00000477052 AFG1LQ8WV93 481 aa13.63□□□□□ -0.23
VARS2-208ENST00000477052 ANKS1AQ92625 1134 aa13.63□□□□□ -0.23
VARS2-208ENST00000477052 ZFP91Q96JP5 570 aaPredicted RBP13.63□□□□□ -0.23
VARS2-208ENST00000477052 SENP2Q9HC62 589 aa13.63□□□□□ -0.23
VARS2-208ENST00000477052 PPP1R11O60927 126 aaPredicted RBP13.62□□□□□ -0.23
VARS2-208ENST00000477052 CFBP00751 764 aa13.62□□□□□ -0.23
VARS2-208ENST00000477052 PARP1P09874 1014 aaKnown RBP13.62□□□□□ -0.23
VARS2-208ENST00000477052 PTH1RQ03431 593 aa13.62□□□□□ -0.23
VARS2-208ENST00000477052 SLC35G1Q2M3R5 365 aa13.62□□□□□ -0.23
VARS2-208ENST00000477052 ASPRV1Q53RT3 343 aa13.62□□□□□ -0.23
VARS2-208ENST00000477052 FBXO11Q86XK2 927 aa13.62□□□□□ -0.23
VARS2-208ENST00000477052 UBAC1Q9BSL1 405 aa13.62□□□□□ -0.23
VARS2-208ENST00000477052 MSRAQ9UJ68 235 aa13.62□□□□□ -0.23
VARS2-208ENST00000477052 MYO9BQ13459 2157 aa13.62□□□□□ -0.23
VARS2-208ENST00000477052 ABCB11O95342 1321 aa13.62□□□□□ -0.23
VARS2-208ENST00000477052 A6NJR5 290 aa13.61□□□□□ -0.23
VARS2-208ENST00000477052 HIP1O00291 1037 aa13.61□□□□□ -0.23
VARS2-208ENST00000477052 OPLAHO14841 1288 aa13.61□□□□□ -0.23
VARS2-208ENST00000477052 IGFBP4P22692 258 aa13.61□□□□□ -0.23
VARS2-208ENST00000477052 IFIT1BQ5T764 474 aaKnown RBP13.61□□□□□ -0.23
VARS2-208ENST00000477052 TTC22Q5TAA0 569 aa13.61□□□□□ -0.23
VARS2-208ENST00000477052 CCDC62Q6P9F0 684 aa13.61□□□□□ -0.23
VARS2-208ENST00000477052 RGS22Q8NE09 1264 aa13.61□□□□□ -0.23
VARS2-208ENST00000477052 RMDN3Q96TC7 470 aa13.61□□□□□ -0.23
VARS2-208ENST00000477052 MPHOSPH6Q99547 160 aaKnown RBP13.61□□□□□ -0.23
VARS2-208ENST00000477052 KRT23Q9C075 422 aa13.61□□□□□ -0.23
VARS2-208ENST00000477052 CTNNA3Q9UI47 895 aa13.61□□□□□ -0.23
VARS2-208ENST00000477052 SLC4A7Q9Y6M7 1214 aa13.61□□□□□ -0.23
VARS2-208ENST00000477052 SCN10AQ9Y5Y9 1956 aa13.6□□□□□ -0.23
VARS2-208ENST00000477052 LOC102724159A0A0B4J2E5 919 aa13.6□□□□□ -0.23
VARS2-208ENST00000477052 KLRF2D3W0D1 207 aa13.6□□□□□ -0.23
VARS2-208ENST00000477052 NKRFO15226 690 aaKnown RBP eCLIP13.6□□□□□ -0.23
VARS2-208ENST00000477052 HOXA13P31271 388 aaPredicted RBP13.6□□□□□ -0.23
VARS2-208ENST00000477052 ARHGAP1Q07960 439 aa13.6□□□□□ -0.23
VARS2-208ENST00000477052 PWP2Q15269 919 aaKnown RBP13.6□□□□□ -0.23
VARS2-208ENST00000477052 SEC23AQ15436 765 aa13.6□□□□□ -0.23
VARS2-208ENST00000477052 BRDTQ58F21 947 aaPredicted RBP13.6□□□□□ -0.23
VARS2-208ENST00000477052 CCDC178Q5BJE1 867 aa13.6□□□□□ -0.23
VARS2-208ENST00000477052 ARHGEF16Q5VV41 709 aa13.6□□□□□ -0.23
VARS2-208ENST00000477052 NSUN6Q8TEA1 469 aaKnown RBP13.6□□□□□ -0.23
VARS2-208ENST00000477052 PIBF1Q8WXW3 757 aa13.6□□□□□ -0.23
VARS2-208ENST00000477052 GAS2L1Q99501 681 aaPredicted RBP13.6□□□□□ -0.23
VARS2-208ENST00000477052 CERS4Q9HA82 394 aa13.6□□□□□ -0.23
VARS2-208ENST00000477052 MAD2L2Q9UI95 211 aa13.6□□□□□ -0.23
VARS2-208ENST00000477052 PNMA2Q9UL42 364 aa13.6□□□□□ -0.23
VARS2-208ENST00000477052 MYH6P13533 1939 aa13.6□□□□□ -0.23
VARS2-208ENST00000477052 RAD50Q92878 1312 aa13.6□□□□□ -0.23
VARS2-208ENST00000477052 SPTBN5Q9NRC6 3674 aaKnown RBP13.6□□□□□ -0.23
VARS2-208ENST00000477052 RFXAPO00287 272 aa13.59□□□□□ -0.23
VARS2-208ENST00000477052 MMP3P08254 477 aa13.59□□□□□ -0.23
VARS2-208ENST00000477052 SUPT20HL2P0C7V6 817 aa13.59□□□□□ -0.23
VARS2-208ENST00000477052 MYCLP12524 364 aaPredicted RBP13.59□□□□□ -0.23
VARS2-208ENST00000477052 ATP2A2P16615 1042 aaKnown RBP13.59□□□□□ -0.23
VARS2-208ENST00000477052 RAB30Q15771 203 aa13.59□□□□□ -0.23
VARS2-208ENST00000477052 STXBP2Q15833 593 aa13.59□□□□□ -0.23
VARS2-208ENST00000477052 GDF6Q6KF10 455 aaPredicted RBP13.59□□□□□ -0.23
VARS2-208ENST00000477052 HOMER1Q86YM7 354 aa13.59□□□□□ -0.23
VARS2-208ENST00000477052 RPUSD2Q8IZ73 545 aaKnown RBP13.59□□□□□ -0.23
VARS2-208ENST00000477052 IL31RAQ8NI17 732 aa13.59□□□□□ -0.23
VARS2-208ENST00000477052 KAT2BQ92831 832 aa13.59□□□□□ -0.23
VARS2-208ENST00000477052 CTAGE1Q96RT6 745 aa13.59□□□□□ -0.23
VARS2-208ENST00000477052 FTOQ9C0B1 505 aaKnown RBP eCLIP13.59□□□□□ -0.23
VARS2-208ENST00000477052 MTIF3Q9H2K0 278 aaKnown RBP13.59□□□□□ -0.23
VARS2-208ENST00000477052 CNNM2Q9H8M5 875 aa13.59□□□□□ -0.23
VARS2-208ENST00000477052 SLC28A3Q9HAS3 691 aa13.59□□□□□ -0.23
VARS2-208ENST00000477052 PXMP2Q9NR77 195 aa13.59□□□□□ -0.23
VARS2-208ENST00000477052 NOD1Q9Y239 953 aa13.59□□□□□ -0.23
VARS2-208ENST00000477052 MRPL11Q9Y3B7 192 aaKnown RBP13.59□□□□□ -0.23
VARS2-208ENST00000477052 CHD7Q9P2D1 2997 aa13.59□□□□□ -0.23
VARS2-208ENST00000477052 B4DLN1 442 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms