RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 CEP290O15078 2479 aa21.88■■□□□ 1.09
PTCD3-210ENST00000473829 RBM47A0AV96 593 aaKnown RBP21.88■■□□□ 1.09
PTCD3-210ENST00000473829 EVI5O60447 810 aa21.88■■□□□ 1.09
PTCD3-210ENST00000473829 ATN1P54259 1190 aaPredicted RBP21.88■■□□□ 1.09
PTCD3-210ENST00000473829 GJA9P57773 515 aa21.88■■□□□ 1.09
PTCD3-210ENST00000473829 FERMT2Q96AC1 680 aa21.88■■□□□ 1.09
PTCD3-210ENST00000473829 CYP46A1Q9Y6A2 500 aa21.88■■□□□ 1.09
PTCD3-210ENST00000473829 GCOM1H8Y6P7 765 aaPredicted RBP21.87■■□□□ 1.09
PTCD3-210ENST00000473829 C6orf222P0C671 652 aaPredicted RBP21.87■■□□□ 1.09
PTCD3-210ENST00000473829 POLR2MP0CAP2 368 aa21.87■■□□□ 1.09
PTCD3-210ENST00000473829 CST5P28325 142 aaPredicted RBP21.87■■□□□ 1.09
PTCD3-210ENST00000473829 ADD1P35611 737 aaKnown RBP21.87■■□□□ 1.09
PTCD3-210ENST00000473829 METAP2P50579 478 aaKnown RBP eCLIP21.87■■□□□ 1.09
PTCD3-210ENST00000473829 ARHGEF16Q5VV41 709 aa21.87■■□□□ 1.09
PTCD3-210ENST00000473829 IQSEC1Q6DN90 963 aa21.87■■□□□ 1.09
PTCD3-210ENST00000473829 TLK2Q86UE8 772 aa21.87■■□□□ 1.09
PTCD3-210ENST00000473829 C7orf61Q8IZ16 206 aa21.87■■□□□ 1.09
PTCD3-210ENST00000473829 IL31RAQ8NI17 732 aa21.87■■□□□ 1.09
PTCD3-210ENST00000473829 GPKOWQ92917 476 aaPredicted RBP eCLIP21.87■■□□□ 1.09
PTCD3-210ENST00000473829 MAP3K20Q9NYL2 800 aaKnown RBP21.87■■□□□ 1.09
PTCD3-210ENST00000473829 EVCP57679 992 aa21.86■■□□□ 1.09
PTCD3-210ENST00000473829 C8orf34Q49A92 452 aa21.86■■□□□ 1.09
PTCD3-210ENST00000473829 NOL8Q76FK4 1167 aaKnown RBP21.86■■□□□ 1.09
PTCD3-210ENST00000473829 SAMD3Q8N6K7 520 aa21.86■■□□□ 1.09
PTCD3-210ENST00000473829 MPHOSPH6Q99547 160 aaKnown RBP21.86■■□□□ 1.09
PTCD3-210ENST00000473829 PDCD2LQ9BRP1 358 aa21.86■■□□□ 1.09
PTCD3-210ENST00000473829 LARP6Q9BRS8 491 aaKnown RBP21.86■■□□□ 1.09
PTCD3-210ENST00000473829 PCDH10Q9P2E7 1040 aa21.86■■□□□ 1.09
PTCD3-210ENST00000473829 A0A1W2PQ45 241 aaPredicted RBP21.85■■□□□ 1.09
PTCD3-210ENST00000473829 A0A1W2PQY0 241 aa21.85■■□□□ 1.09
PTCD3-210ENST00000473829 ARIH2O95376 493 aa21.85■■□□□ 1.09
PTCD3-210ENST00000473829 NKX3-2P78367 333 aa21.85■■□□□ 1.09
PTCD3-210ENST00000473829 BEX3Q00994 111 aa21.85■■□□□ 1.09
PTCD3-210ENST00000473829 KCNA10Q16322 511 aa21.85■■□□□ 1.09
PTCD3-210ENST00000473829 DUSP28Q4G0W2 176 aa21.85■■□□□ 1.09
PTCD3-210ENST00000473829 WWC2Q6AWC2 1192 aa21.85■■□□□ 1.09
PTCD3-210ENST00000473829 HEATR3Q7Z4Q2 680 aa21.85■■□□□ 1.09
PTCD3-210ENST00000473829 FCHSD1Q86WN1 690 aa21.85■■□□□ 1.09
PTCD3-210ENST00000473829 IWS1Q96ST2 819 aa21.85■■□□□ 1.09
PTCD3-210ENST00000473829 WDR11Q9BZH6 1224 aa21.85■■□□□ 1.09
PTCD3-210ENST00000473829 B4DLN1 442 aa21.84■■□□□ 1.09
PTCD3-210ENST00000473829 MEIS2O14770 477 aa21.84■■□□□ 1.09
PTCD3-210ENST00000473829 DYNC1LI2O43237 492 aaPredicted RBP21.84■■□□□ 1.09
PTCD3-210ENST00000473829 NR3C2P08235 984 aa21.84■■□□□ 1.09
PTCD3-210ENST00000473829 PDIA3P30101 505 aaKnown RBP21.84■■□□□ 1.09
PTCD3-210ENST00000473829 MRPL12P52815 198 aaKnown RBP21.84■■□□□ 1.09
PTCD3-210ENST00000473829 ACLYP53396 1101 aa21.84■■□□□ 1.09
PTCD3-210ENST00000473829 PGM5Q15124 567 aa21.84■■□□□ 1.09
PTCD3-210ENST00000473829 TYW1BQ6NUM6 668 aa21.84■■□□□ 1.09
PTCD3-210ENST00000473829 USP17L6PQ6QN14 398 aa21.84■■□□□ 1.09
PTCD3-210ENST00000473829 SLC39A5Q6ZMH5 540 aa21.84■■□□□ 1.09
PTCD3-210ENST00000473829 TSEN34Q9BSV6 310 aaKnown RBP21.84■■□□□ 1.09
PTCD3-210ENST00000473829 V9GY48 417 aaPredicted RBP21.84■■□□□ 1.09
PTCD3-210ENST00000473829 FRMPD4Q14CM0 1322 aa21.83■■□□□ 1.09
PTCD3-210ENST00000473829 ASGR1P07306 291 aa21.83■■□□□ 1.09
PTCD3-210ENST00000473829 RTP1P59025 263 aa21.83■■□□□ 1.09
PTCD3-210ENST00000473829 ANAPC15P60006 121 aa21.83■■□□□ 1.09
PTCD3-210ENST00000473829 SNX17Q15036 470 aa21.83■■□□□ 1.09
PTCD3-210ENST00000473829 STXBP2Q15833 593 aa21.83■■□□□ 1.09
PTCD3-210ENST00000473829 GNASQ5JWF2 1037 aa21.83■■□□□ 1.09
PTCD3-210ENST00000473829 SCFD2Q8WU76 684 aa21.83■■□□□ 1.09
PTCD3-210ENST00000473829 COPS5Q92905 334 aa21.83■■□□□ 1.09
PTCD3-210ENST00000473829 IL17RAQ96F46 866 aa21.83■■□□□ 1.09
PTCD3-210ENST00000473829 SPC25Q9HBM1 224 aa21.83■■□□□ 1.09
PTCD3-210ENST00000473829 NCOA5Q9HCD5 579 aaKnown RBP21.83■■□□□ 1.09
PTCD3-210ENST00000473829 PDRG1Q9NUG6 133 aa21.83■■□□□ 1.09
PTCD3-210ENST00000473829 NR2E3Q9Y5X4 410 aa21.83■■□□□ 1.09
PTCD3-210ENST00000473829 MOXD2PA6NHM9 499 aa21.82■■□□□ 1.08
PTCD3-210ENST00000473829 PIK3CDO00329 1044 aa21.82■■□□□ 1.08
PTCD3-210ENST00000473829 PPP2R5BQ15173 497 aa21.82■■□□□ 1.08
PTCD3-210ENST00000473829 TRIM60Q495X7 471 aa21.82■■□□□ 1.08
PTCD3-210ENST00000473829 SEPT14Q6ZU15 432 aa21.82■■□□□ 1.08
PTCD3-210ENST00000473829 ZFP91Q96JP5 570 aaPredicted RBP21.82■■□□□ 1.08
PTCD3-210ENST00000473829 ZMYND8Q9ULU4 1186 aaPredicted RBP21.82■■□□□ 1.08
PTCD3-210ENST00000473829 Q9Y3F1 56 aa21.82■■□□□ 1.08
PTCD3-210ENST00000473829 CCDC196A0A1B0GTZ2 297 aa21.81■■□□□ 1.08
PTCD3-210ENST00000473829 STXBP3O00186 592 aa21.81■■□□□ 1.08
PTCD3-210ENST00000473829 PPFIA3O75145 1194 aa21.81■■□□□ 1.08
PTCD3-210ENST00000473829 RGS20O76081 388 aa21.81■■□□□ 1.08
PTCD3-210ENST00000473829 MYCLP12524 364 aaPredicted RBP21.81■■□□□ 1.08
PTCD3-210ENST00000473829 SYN1P17600 705 aa21.81■■□□□ 1.08
PTCD3-210ENST00000473829 CCT2P78371 535 aaKnown RBP21.81■■□□□ 1.08
PTCD3-210ENST00000473829 NTRK3Q16288 839 aa21.81■■□□□ 1.08
PTCD3-210ENST00000473829 FSCN1Q16658 493 aaKnown RBP21.81■■□□□ 1.08
PTCD3-210ENST00000473829 UBE2SQ16763 222 aa21.81■■□□□ 1.08
PTCD3-210ENST00000473829 CCDC62Q6P9F0 684 aa21.81■■□□□ 1.08
PTCD3-210ENST00000473829 SMARCC2Q8TAQ2 1214 aa21.81■■□□□ 1.08
PTCD3-210ENST00000473829 AP5M1Q9H0R1 490 aa21.81■■□□□ 1.08
PTCD3-210ENST00000473829 PSTPIP2Q9H939 334 aa21.81■■□□□ 1.08
PTCD3-210ENST00000473829 EIF3JO75822 258 aaKnown RBP21.8■■□□□ 1.08
PTCD3-210ENST00000473829 TXNP10599 105 aaKnown RBP21.8■■□□□ 1.08
PTCD3-210ENST00000473829 VSIG10LQ86VR7 867 aa21.8■■□□□ 1.08
PTCD3-210ENST00000473829 PCSK9Q8NBP7 692 aaKnown RBP21.8■■□□□ 1.08
PTCD3-210ENST00000473829 OR6J1Q8NGC5 347 aa21.8■■□□□ 1.08
PTCD3-210ENST00000473829 CUL5Q93034 780 aa21.8■■□□□ 1.08
PTCD3-210ENST00000473829 PHKBQ93100 1093 aa21.8■■□□□ 1.08
PTCD3-210ENST00000473829 ATP11BQ9Y2G3 1177 aa21.8■■□□□ 1.08
PTCD3-210ENST00000473829 RANBP2P49792 3224 aaKnown RBP21.8■■□□□ 1.08
PTCD3-210ENST00000473829 LTBP2Q14767 1821 aa21.79■■□□□ 1.08
PTCD3-210ENST00000473829 TTLL4Q14679 1199 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms