RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CFBP00751 764 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 TXNP10599 105 aaKnown RBP10.49□□□□□ -0.73
USF1-204ENST00000472217 CPT1AP50416 773 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 HSD17B4P51659 736 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 PURAQ00577 322 aaKnown RBP10.49□□□□□ -0.73
USF1-204ENST00000472217 COL9A3Q14050 684 aaPredicted RBP10.49□□□□□ -0.73
USF1-204ENST00000472217 BMP2KLQ5H9B9 411 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 MFSD5Q6N075 450 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 HOMER1Q86YM7 354 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 IGDCC4Q8TDY8 1250 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 NSUN6Q8TEA1 469 aaKnown RBP10.49□□□□□ -0.73
USF1-204ENST00000472217 COPS5Q92905 334 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 RNPC3Q96LT9 517 aaKnown RBP10.49□□□□□ -0.73
USF1-204ENST00000472217 PIGSQ96S52 555 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 RMDN3Q96TC7 470 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 PPP1R12CQ9BZL4 782 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 RIOX1Q9H6W3 641 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 GPHNQ9NQX3 736 aaPredicted RBP10.49□□□□□ -0.73
USF1-204ENST00000472217 POLR3EQ9NVU0 708 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 MTMR10Q9NXD2 777 aa10.49□□□□□ -0.73
USF1-204ENST00000472217 A6NJR5 290 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 SLC27A2O14975 620 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 CYTH3O43739 400 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 B4GALT4O60513 344 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 MYL3P08590 195 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 CSF2RAP15509 400 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 EIF2AK2P19525 551 aaKnown RBP10.48□□□□□ -0.73
USF1-204ENST00000472217 GHRHRQ02643 423 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 TTLL4Q14679 1199 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 ARHGEF16Q5VV41 709 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 FAM109BQ6ICB4 259 aaPredicted RBP10.48□□□□□ -0.73
USF1-204ENST00000472217 CCDC62Q6P9F0 684 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 SEPT14Q6ZU15 432 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 CATIPQ7Z7H3 387 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 ZNF654Q8IZM8 581 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 IWS1Q96ST2 819 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 MYL10Q9BUA6 226 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 TRPV6Q9H1D0 765 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 RNF39Q9H2S5 420 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 LY9Q9HBG7 655 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 ANO2Q9NQ90 1003 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 PXMP2Q9NR77 195 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 PCDHA1Q9Y5I3 950 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 KIAA1217Q5T5P2 1943 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 LAMA3Q16787 3333 aa10.48□□□□□ -0.73
USF1-204ENST00000472217 PNMA6FA0A0J9YX94 578 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 PRC1O43663 620 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 NR3C2P08235 984 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 HOXA13P31271 388 aaPredicted RBP10.47□□□□□ -0.73
USF1-204ENST00000472217 CYP2C18P33260 490 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 SMAD3P84022 425 aaKnown RBP10.47□□□□□ -0.73
USF1-204ENST00000472217 PPIGQ13427 754 aaKnown RBP eCLIP10.47□□□□□ -0.731e-6■■■■□ 25.5
USF1-204ENST00000472217 NECTIN1Q15223 517 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 STXBP2Q15833 593 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 LY6KQ17RY6 165 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 CREB3L3Q68CJ9 461 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 CASC1Q6TDU7 716 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 C16orf59Q7L2K0 433 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 TMEM199Q8N511 208 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.47□□□□□ -0.73
USF1-204ENST00000472217 MTA3Q9BTC8 594 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 NOC4LQ9BVI4 516 aaKnown RBP10.47□□□□□ -0.73
USF1-204ENST00000472217 SEZ6LQ9BYH1 1024 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 ALDH8A1Q9H2A2 487 aaPredicted RBP10.47□□□□□ -0.73
USF1-204ENST00000472217 HIPK3Q9H422 1215 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 UMODL1Q5DID0 1318 aa10.47□□□□□ -0.73
USF1-204ENST00000472217 SH2B2O14492 632 aaPredicted RBP10.46□□□□□ -0.73
USF1-204ENST00000472217 DDAH1O94760 285 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 GH1P01241 217 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 MCM5P33992 734 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 C1QBPQ07021 282 aaKnown RBP10.46□□□□□ -0.73
USF1-204ENST00000472217 ARHGAP1Q07960 439 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 TRAF1Q13077 416 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 NBPF20Q3BBV1 942 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 BRDTQ58F21 947 aaPredicted RBP10.46□□□□□ -0.73
USF1-204ENST00000472217 TMEM240Q5SV17 173 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 ZNF697Q5TEC3 545 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 SAMD3Q8N6K7 520 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 IL31RAQ8NI17 732 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 CTCFLQ8NI51 663 aaPredicted RBP10.46□□□□□ -0.73
USF1-204ENST00000472217 PPP1R13LQ8WUF5 828 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 PIBF1Q8WXW3 757 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 TMEM87BQ96K49 555 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 FAM161BQ96MY7 647 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 GUCD1Q96NT3 240 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 MAP3K14Q99558 947 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 PDCD2LQ9BRP1 358 aa10.46□□□□□ -0.73
USF1-204ENST00000472217 MTG1Q9BT17 334 aaPredicted RBP10.46□□□□□ -0.73
USF1-204ENST00000472217 MAP3K20Q9NYL2 800 aaKnown RBP10.46□□□□□ -0.73
USF1-204ENST00000472217 SCN10AQ9Y5Y9 1956 aa10.46□□□□□ -0.74
USF1-204ENST00000472217 CCDC69A6NI79 296 aa10.45□□□□□ -0.74
USF1-204ENST00000472217 GCOM1H8Y6P7 765 aaPredicted RBP10.45□□□□□ -0.74
USF1-204ENST00000472217 KPNA6O60684 536 aa10.45□□□□□ -0.74
USF1-204ENST00000472217 EIF3JO75822 258 aaKnown RBP10.45□□□□□ -0.74
USF1-204ENST00000472217 POLR2MP0CAP2 368 aa10.45□□□□□ -0.74
USF1-204ENST00000472217 ACRP10323 421 aa10.45□□□□□ -0.74
USF1-204ENST00000472217 MYCLP12524 364 aaPredicted RBP10.45□□□□□ -0.74
USF1-204ENST00000472217 KIF5BP33176 963 aa10.45□□□□□ -0.74
USF1-204ENST00000472217 CACNB1Q02641 598 aaPredicted RBP10.45□□□□□ -0.74
USF1-204ENST00000472217 PGM5Q15124 567 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms