RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 TNKSO95271 1327 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 PSMA7O14818 248 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 AKR1B10O60218 316 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 APBA3O96018 575 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 ERCC3P19447 782 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 EIF4A3P38919 411 aaKnown RBP15.24■□□□□ 0.03
NPHP4-207ENST00000470763 ALX1Q15699 326 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 TMC4Q7Z404 712 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 HELBQ8NG08 1087 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-207ENST00000470763 OR2W6PQ8NHA6 318 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 DCAF5Q96JK2 942 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 TLR10Q9BXR5 811 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 FAM207AQ9NSI2 230 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-207ENST00000470763 MEGF6O75095 1541 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 EPHB6O15197 1021 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 PPP1R12BO60237 982 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-207ENST00000470763 PAK2Q13177 524 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 PLCB4Q15147 1175 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 LCORLQ8N3X6 602 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 MIGA1Q8NAN2 632 aa15.24■□□□□ 0.03
NPHP4-207ENST00000470763 CNOT6LQ96LI5 555 aaKnown RBP15.24■□□□□ 0.03
NPHP4-207ENST00000470763 NOC4LQ9BVI4 516 aaKnown RBP15.24■□□□□ 0.03
NPHP4-207ENST00000470763 TMOD1P28289 359 aa15.23■□□□□ 0.03
NPHP4-207ENST00000470763 NPY5RQ15761 445 aa15.23■□□□□ 0.03
NPHP4-207ENST00000470763 TTI2Q6NXR4 508 aa15.23■□□□□ 0.03
NPHP4-207ENST00000470763 TTLL11Q8NHH1 800 aa15.23■□□□□ 0.03
NPHP4-207ENST00000470763 CASKIN2Q8WXE0 1202 aa15.23■□□□□ 0.03
NPHP4-207ENST00000470763 MTMR8Q96EF0 704 aa15.23■□□□□ 0.03
NPHP4-207ENST00000470763 KRT12Q99456 494 aa15.23■□□□□ 0.03
NPHP4-207ENST00000470763 NUP58Q9BVL2 599 aa15.23■□□□□ 0.03
NPHP4-207ENST00000470763 MINDY4BA8MYZ0 360 aa15.23■□□□□ 0.03
NPHP4-207ENST00000470763 SKAP2O75563 359 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-207ENST00000470763 PRLRP16471 622 aa15.23■□□□□ 0.03
NPHP4-207ENST00000470763 TNFRSF8P28908 595 aa15.23■□□□□ 0.03
NPHP4-207ENST00000470763 LRCH2Q5VUJ6 765 aa15.23■□□□□ 0.03
NPHP4-207ENST00000470763 DUSP9Q99956 384 aaKnown RBP15.23■□□□□ 0.03
NPHP4-207ENST00000470763 GDF3Q9NR23 364 aa15.23■□□□□ 0.03
NPHP4-207ENST00000470763 RIPOR2Q9Y4F9 1068 aa15.23■□□□□ 0.03
NPHP4-207ENST00000470763 SNAP23O00161 211 aa15.22■□□□□ 0.03
NPHP4-207ENST00000470763 SF3A3Q12874 501 aaKnown RBP eCLIP15.22■□□□□ 0.03
NPHP4-207ENST00000470763 TEX11Q8IYF3 940 aa15.22■□□□□ 0.03
NPHP4-207ENST00000470763 TNFRSF25Q93038 417 aa15.22■□□□□ 0.03
NPHP4-207ENST00000470763 BCCIPQ9P287 314 aaKnown RBP eCLIP15.22■□□□□ 0.03
NPHP4-207ENST00000470763 PCCAP05165 728 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-207ENST00000470763 EZRP15311 586 aaKnown RBP15.22■□□□□ 0.03
NPHP4-207ENST00000470763 RASSF7Q02833 373 aa15.22■□□□□ 0.03
NPHP4-207ENST00000470763 GREM2Q9H772 168 aa15.22■□□□□ 0.03
NPHP4-207ENST00000470763 BCL9O00512 1426 aa15.22■□□□□ 0.03
NPHP4-207ENST00000470763 TNS2Q63HR2 1409 aa15.22■□□□□ 0.03
NPHP4-207ENST00000470763 ITGA6P23229 1130 aa15.22■□□□□ 0.03
NPHP4-207ENST00000470763 TBC1D31Q96DN5 1066 aa15.22■□□□□ 0.03
NPHP4-207ENST00000470763 SGSM3Q96HU1 749 aa15.22■□□□□ 0.03
NPHP4-207ENST00000470763 PACSIN2Q9UNF0 486 aaPredicted RBP15.22■□□□□ 0.03
NPHP4-207ENST00000470763 NUP188Q5SRE5 1749 aa15.21■□□□□ 0.03
NPHP4-207ENST00000470763 VEGFAP15692 232 aaPredicted RBP15.21■□□□□ 0.03
NPHP4-207ENST00000470763 MAGEA1P43355 309 aa15.21■□□□□ 0.03
NPHP4-207ENST00000470763 GFPT1Q06210 699 aaPredicted RBP15.21■□□□□ 0.03
NPHP4-207ENST00000470763 NAA25Q14CX7 972 aa15.21■□□□□ 0.03
NPHP4-207ENST00000470763 CFAP221Q4G0U5 840 aa15.21■□□□□ 0.03
NPHP4-207ENST00000470763 ANKRD20A8PQ5CZ79 823 aa15.21■□□□□ 0.03
NPHP4-207ENST00000470763 MIIPQ5JXC2 388 aa15.21■□□□□ 0.03
NPHP4-207ENST00000470763 NAIF1Q69YI7 327 aaPredicted RBP15.21■□□□□ 0.03
NPHP4-207ENST00000470763 TMTC2Q8N394 836 aa15.21■□□□□ 0.03
NPHP4-207ENST00000470763 RETREG2Q8NC44 543 aa15.21■□□□□ 0.03
NPHP4-207ENST00000470763 GOLGA6L10A6NI86 522 aa15.21■□□□□ 0.03
NPHP4-207ENST00000470763 HMGB1P1B2RPK0 211 aaPredicted RBP15.21■□□□□ 0.03
NPHP4-207ENST00000470763 IL2RBP14784 551 aa15.21■□□□□ 0.03
NPHP4-207ENST00000470763 HLTFQ14527 1009 aaKnown RBP eCLIP15.21■□□□□ 0.03
NPHP4-207ENST00000470763 NAALADL2Q58DX5 795 aa15.21■□□□□ 0.03
NPHP4-207ENST00000470763 KLHDC7AQ5VTJ3 777 aa15.21■□□□□ 0.03
NPHP4-207ENST00000470763 ANKRD40Q6AI12 368 aa15.21■□□□□ 0.03
NPHP4-207ENST00000470763 DISC1Q9NRI5 854 aa15.21■□□□□ 0.03
NPHP4-207ENST00000470763 ANKRD18BA2A2Z9 1011 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 GMNCA6NCL1 334 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 KLRC4O43908 158 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 FTCDO95954 541 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 MRPL12P52815 198 aaKnown RBP15.2■□□□□ 0.02
NPHP4-207ENST00000470763 FUT2Q10981 343 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 PROCA1Q8NCQ7 364 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-207ENST00000470763 ACTR5Q9H9F9 607 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-207ENST00000470763 FBXO3Q9UK99 471 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 PLAGL2Q9UPG8 496 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 BRD2P25440 801 aaKnown RBP15.2■□□□□ 0.02
NPHP4-207ENST00000470763 KLHL7Q8IXQ5 586 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 MMRN2Q9H8L6 949 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 LEMD3Q9Y2U8 911 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 PRPF3O43395 683 aaKnown RBP15.2■□□□□ 0.02
NPHP4-207ENST00000470763 GBP2P32456 591 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-207ENST00000470763 SLC1A4P43007 532 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 SCTRP47872 440 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 NLRP5P59047 1200 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 DRP2Q13474 957 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 GLE1Q53GS7 698 aaKnown RBP15.2■□□□□ 0.02
NPHP4-207ENST00000470763 ODF2Q5BJF6 829 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 RRAGAQ7L523 313 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 CD302Q8IX05 232 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 SDR42E1Q8WUS8 393 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 NACAP1Q9BZK3 213 aa15.2■□□□□ 0.02
NPHP4-207ENST00000470763 SEC23AQ15436 765 aa15.19■□□□□ 0.02
NPHP4-207ENST00000470763 ACCSLQ4AC99 568 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms