RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 DPF3Q92784 378 aa17.19■□□□□ 0.34
CDC42SE1-203ENST00000470278 SNX21Q969T3 373 aa17.19■□□□□ 0.34
CDC42SE1-203ENST00000470278 GLT8D2Q9H1C3 349 aa17.19■□□□□ 0.34
CDC42SE1-203ENST00000470278 SH3GLB2Q9NR46 395 aa17.19■□□□□ 0.34
CDC42SE1-203ENST00000470278 ADD3Q9UEY8 706 aaKnown RBP17.19■□□□□ 0.34
CDC42SE1-203ENST00000470278 ASTN1O14525 1302 aa17.19■□□□□ 0.34
CDC42SE1-203ENST00000470278 SYNGAP1Q96PV0 1343 aa17.19■□□□□ 0.34
CDC42SE1-203ENST00000470278 GCOM1H8Y6P7 765 aaPredicted RBP17.18■□□□□ 0.34
CDC42SE1-203ENST00000470278 SOX1O00570 391 aaPredicted RBP17.18■□□□□ 0.34
CDC42SE1-203ENST00000470278 CFBP00751 764 aa17.18■□□□□ 0.34
CDC42SE1-203ENST00000470278 POLR2MP0CAP2 368 aa17.18■□□□□ 0.34
CDC42SE1-203ENST00000470278 CALML3P27482 149 aa17.18■□□□□ 0.34
CDC42SE1-203ENST00000470278 NAPAP54920 295 aa17.18■□□□□ 0.34
CDC42SE1-203ENST00000470278 CNTN2Q02246 1040 aa17.18■□□□□ 0.34
CDC42SE1-203ENST00000470278 CCL14Q16627 93 aa17.18■□□□□ 0.34
CDC42SE1-203ENST00000470278 WASF1Q92558 559 aa17.18■□□□□ 0.34
CDC42SE1-203ENST00000470278 PSTPIP2Q9H939 334 aa17.18■□□□□ 0.34
CDC42SE1-203ENST00000470278 FLRT1Q9NZU1 646 aa17.18■□□□□ 0.34
CDC42SE1-203ENST00000470278 FRMPD4Q14CM0 1322 aa17.18■□□□□ 0.34
CDC42SE1-203ENST00000470278 SOWAHBA6NEL2 793 aa17.17■□□□□ 0.34
CDC42SE1-203ENST00000470278 PPFIA3O75145 1194 aa17.17■□□□□ 0.34
CDC42SE1-203ENST00000470278 MAP3K21Q5TCX8 1036 aa17.17■□□□□ 0.34
CDC42SE1-203ENST00000470278 MORC4Q8TE76 937 aa17.17■□□□□ 0.34
CDC42SE1-203ENST00000470278 TBC1D5Q92609 795 aa17.17■□□□□ 0.34
CDC42SE1-203ENST00000470278 CUL5Q93034 780 aa17.17■□□□□ 0.34
CDC42SE1-203ENST00000470278 TINF2Q9BSI4 451 aa17.17■□□□□ 0.34
CDC42SE1-203ENST00000470278 ZMYND12Q9H0C1 365 aa17.17■□□□□ 0.34
CDC42SE1-203ENST00000470278 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.17■□□□□ 0.34
CDC42SE1-203ENST00000470278 RIC8AQ9NPQ8 531 aa17.17■□□□□ 0.34
CDC42SE1-203ENST00000470278 COL20A1Q9P218 1284 aa17.17■□□□□ 0.34
CDC42SE1-203ENST00000470278 ASB14A6NK59 587 aa17.16■□□□□ 0.34
CDC42SE1-203ENST00000470278 MEIS2O14770 477 aa17.16■□□□□ 0.34
CDC42SE1-203ENST00000470278 JAK2O60674 1132 aa17.16■□□□□ 0.34
CDC42SE1-203ENST00000470278 FDPSP14324 419 aaKnown RBP17.16■□□□□ 0.34
CDC42SE1-203ENST00000470278 EDNRBP24530 442 aa17.16■□□□□ 0.34
CDC42SE1-203ENST00000470278 ALDH5A1P51649 535 aaPredicted RBP17.16■□□□□ 0.34
CDC42SE1-203ENST00000470278 ADCY7P51828 1080 aa17.16■□□□□ 0.34
CDC42SE1-203ENST00000470278 HMGN5P82970 282 aaKnown RBP17.16■□□□□ 0.34
CDC42SE1-203ENST00000470278 ORC3Q9UBD5 711 aaPredicted RBP17.16■□□□□ 0.34
CDC42SE1-203ENST00000470278 NRBP1Q9UHY1 535 aa17.16■□□□□ 0.34
CDC42SE1-203ENST00000470278 MCM3APO60318 1980 aa17.15■□□□□ 0.34
CDC42SE1-203ENST00000470278 GNA11P29992 359 aa17.15■□□□□ 0.34
CDC42SE1-203ENST00000470278 HOXA13P31271 388 aaPredicted RBP17.15■□□□□ 0.34
CDC42SE1-203ENST00000470278 MRPL12P52815 198 aaKnown RBP17.15■□□□□ 0.34
CDC42SE1-203ENST00000470278 CUL4AQ13619 759 aa17.15■□□□□ 0.34
CDC42SE1-203ENST00000470278 MFSD14CQ5VZR4 134 aa17.15■□□□□ 0.34
CDC42SE1-203ENST00000470278 NSUN6Q8TEA1 469 aaKnown RBP17.15■□□□□ 0.34
CDC42SE1-203ENST00000470278 PAWRQ96IZ0 340 aaKnown RBP17.15■□□□□ 0.34
CDC42SE1-203ENST00000470278 MPHOSPH6Q99547 160 aaKnown RBP17.15■□□□□ 0.34
CDC42SE1-203ENST00000470278 HTATIP2Q9BUP3 242 aa17.15■□□□□ 0.34
CDC42SE1-203ENST00000470278 VPS54Q9P1Q0 977 aa17.15■□□□□ 0.34
CDC42SE1-203ENST00000470278 SMCO2A6NFE2 343 aa17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 K7ELQ4 463 aaPredicted RBP17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 XBP1P17861 261 aa17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 CLK2P49760 499 aaKnown RBP17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 AP3B2Q13367 1082 aa17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 MCTP2Q6DN12 878 aa17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 GALNT17Q6IS24 598 aa17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 ARMCX2Q7L311 632 aa17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 DAGLBQ8NCG7 672 aa17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 BICD2Q8TD16 824 aa17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 PURBQ96QR8 312 aaKnown RBP17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 IWS1Q96ST2 819 aa17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 RMDN3Q96TC7 470 aa17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 C6orf50Q9HD87 102 aa17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 PXMP2Q9NR77 195 aa17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 RPTORQ8N122 1335 aa17.14■□□□□ 0.33
CDC42SE1-203ENST00000470278 B4DLN1 442 aa17.13■□□□□ 0.33
CDC42SE1-203ENST00000470278 CYBAP13498 195 aa17.13■□□□□ 0.33
CDC42SE1-203ENST00000470278 PRKAR2AP13861 404 aaKnown RBP17.13■□□□□ 0.33
CDC42SE1-203ENST00000470278 CYP2C19P33261 490 aa17.13■□□□□ 0.33
CDC42SE1-203ENST00000470278 USP17L6PQ6QN14 398 aa17.13■□□□□ 0.33
CDC42SE1-203ENST00000470278 AIFM3Q96NN9 605 aa17.13■□□□□ 0.33
CDC42SE1-203ENST00000470278 TAAR1Q96RJ0 339 aa17.13■□□□□ 0.33
CDC42SE1-203ENST00000470278 ALG1Q9BT22 464 aa17.13■□□□□ 0.33
CDC42SE1-203ENST00000470278 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.13■□□□□ 0.33
CDC42SE1-203ENST00000470278 SPDYE3A6NKU9 549 aa17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 SNAI1O95863 264 aaPredicted RBP17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 FOSP01100 380 aaPredicted RBP17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 TFRCP02786 760 aaKnown RBP17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 CACNB2Q08289 660 aaPredicted RBP17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 UBE2SQ16763 222 aa17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 ARHGEF16Q5VV41 709 aa17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 REXO1Q8N1G1 1221 aaKnown RBP17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 PDCD2LQ9BRP1 358 aa17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 PHF20Q9BVI0 1012 aa17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 KATNBL1Q9H079 304 aa17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 ABHD16BQ9H3Z7 469 aa17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 CNPY2Q9Y2B0 182 aa17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 LTBP2Q14767 1821 aa17.12■□□□□ 0.33
CDC42SE1-203ENST00000470278 NLRP5P59047 1200 aa17.11■□□□□ 0.33
CDC42SE1-203ENST00000470278 PGM5Q15124 567 aa17.11■□□□□ 0.33
CDC42SE1-203ENST00000470278 NPY5RQ15761 445 aa17.11■□□□□ 0.33
CDC42SE1-203ENST00000470278 FCHSD1Q86WN1 690 aa17.11■□□□□ 0.33
CDC42SE1-203ENST00000470278 HSCBQ8IWL3 235 aa17.11■□□□□ 0.33
CDC42SE1-203ENST00000470278 INTS4Q96HW7 963 aaKnown RBP17.11■□□□□ 0.33
CDC42SE1-203ENST00000470278 LRCH3Q96II8 777 aa17.11■□□□□ 0.33
CDC42SE1-203ENST00000470278 GDF15Q99988 308 aa17.11■□□□□ 0.33
CDC42SE1-203ENST00000470278 VTA1Q9NP79 307 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms