RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 SLC10A5Q5PT55 438 aa13.69□□□□□ -0.22
USP11-206ENST00000469080 RC3H1Q5TC82 1133 aaKnown RBP13.69□□□□□ -0.22
USP11-206ENST00000469080 CABP7Q86V35 215 aa13.69□□□□□ -0.22
USP11-206ENST00000469080 POTEDQ86YR6 584 aa13.69□□□□□ -0.22
USP11-206ENST00000469080 KLHL23Q8NBE8 558 aa13.69□□□□□ -0.22
USP11-206ENST00000469080 BAG1Q99933 345 aaPredicted RBP13.69□□□□□ -0.22
USP11-206ENST00000469080 CRACR2AQ9BSW2 395 aa13.69□□□□□ -0.22
USP11-206ENST00000469080 PHF20Q9BVI0 1012 aa13.69□□□□□ -0.22
USP11-206ENST00000469080 GNAQP50148 359 aa13.69□□□□□ -0.22
USP11-206ENST00000469080 EZH2Q15910 746 aaKnown RBP13.69□□□□□ -0.22
USP11-206ENST00000469080 PFKFB3Q16875 520 aaPredicted RBP13.69□□□□□ -0.22
USP11-206ENST00000469080 CCDC148Q8NFR7 591 aa13.69□□□□□ -0.22
USP11-206ENST00000469080 KIFC2Q96AC6 838 aa13.69□□□□□ -0.22
USP11-206ENST00000469080 GOPCQ9HD26 462 aa13.69□□□□□ -0.22
USP11-206ENST00000469080 EXOC1Q9NV70 894 aa13.69□□□□□ -0.22
USP11-206ENST00000469080 MCM8Q9UJA3 840 aa13.69□□□□□ -0.22
USP11-206ENST00000469080 SOWAHDA6NJG2 315 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 DDAH1O94760 285 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 CAVIN2O95810 425 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 RPSAP08865 295 aaKnown RBP13.68□□□□□ -0.22
USP11-206ENST00000469080 GSDMDP57764 484 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 CCZ1BP86790 482 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 CCZ1P86791 482 aaPredicted RBP13.68□□□□□ -0.22
USP11-206ENST00000469080 CCDC93Q567U6 631 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 SNX29Q8TEQ0 813 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 FAM204AQ9H8W3 233 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 LRWD1Q9UFC0 647 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 CTDP1Q9Y5B0 961 aaPredicted RBP13.68□□□□□ -0.22
USP11-206ENST00000469080 TRIM21P19474 475 aaKnown RBP13.68□□□□□ -0.22
USP11-206ENST00000469080 CRYMQ14894 314 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 CERKLQ49MI3 558 aaPredicted RBP13.68□□□□□ -0.22
USP11-206ENST00000469080 TCERG1LQ5VWI1 586 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 NLGN1Q8N2Q7 840 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 CERS5Q8N5B7 392 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 GPR161Q8N6U8 529 aaKnown RBP13.68□□□□□ -0.22
USP11-206ENST00000469080 CALML4Q96GE6 196 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 TACO1Q9BSH4 297 aaKnown RBP13.68□□□□□ -0.22
USP11-206ENST00000469080 TMOD2Q9NZR1 351 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 PCDHA4Q9UN74 947 aa13.68□□□□□ -0.22
USP11-206ENST00000469080 SIPA1L3O60292 1781 aaPredicted RBP13.68□□□□□ -0.22
USP11-206ENST00000469080 CHUKO15111 745 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 RPS6KA5O75582 802 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 GBP2P32456 591 aaPredicted RBP13.67□□□□□ -0.22
USP11-206ENST00000469080 STIM1Q13586 685 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 KIF4BQ2VIQ3 1234 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 PROM2Q8N271 834 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 ZKSCAN4Q969J2 545 aaPredicted RBP13.67□□□□□ -0.22
USP11-206ENST00000469080 SLF1Q9BQI6 1058 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 RTFDC1Q9BY42 306 aaPredicted RBP13.67□□□□□ -0.22
USP11-206ENST00000469080 GUCA1BQ9UMX6 200 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 SEMA3EO15041 775 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 CCP110O43303 1012 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 PLCG2P16885 1265 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 PLCG1P19174 1290 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 CASP14P31944 242 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 MICAL1Q8TDZ2 1067 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 CSRNP1Q96S65 589 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 FZD1Q9UP38 647 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 ITGB4P16144 1822 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 SNUPNO95149 360 aaKnown RBP13.67□□□□□ -0.22
USP11-206ENST00000469080 FCER1AP12319 257 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 TOGARAM1Q9Y4F4 1720 aa13.67□□□□□ -0.22
USP11-206ENST00000469080 GH2P01242 217 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 MATR3P43243 847 aaKnown RBP eCLIP13.66□□□□□ -0.22
USP11-206ENST00000469080 CRKP46108 304 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 ETF1P62495 437 aaKnown RBP13.66□□□□□ -0.22
USP11-206ENST00000469080 CALCRLQ16602 461 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 KCTD19Q17RG1 926 aaPredicted RBP13.66□□□□□ -0.22
USP11-206ENST00000469080 PRR16Q569H4 304 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 KANK3Q6NY19 840 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 OGFOD1Q8N543 542 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 MAD2L2Q9UI95 211 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 PCDHA1Q9Y5I3 950 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 A0A0U1RQJ8 604 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 TFRCP02786 760 aaKnown RBP13.66□□□□□ -0.22
USP11-206ENST00000469080 GNA11P29992 359 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 STAT3P40763 770 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 EPS15P42566 896 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 PPP2R3AQ06190 1150 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 E4F1Q66K89 784 aaPredicted RBP13.66□□□□□ -0.22
USP11-206ENST00000469080 CDC42EP5Q6NZY7 148 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 ATRIPQ8WXE1 791 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 CAPZA3Q96KX2 299 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 BCS1LQ9Y276 419 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 ANKRD33BA6NCL7 494 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 POLRMTO00411 1230 aaKnown RBP13.66□□□□□ -0.22
USP11-206ENST00000469080 RPN1P04843 607 aaKnown RBP13.66□□□□□ -0.22
USP11-206ENST00000469080 ADCY7P51828 1080 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 RBL2Q08999 1139 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 NCAPHQ15003 741 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 NCAPH2Q6IBW4 605 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 HDXQ7Z353 690 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 CSGALNACT2Q8N6G5 542 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 ACRBPQ8NEB7 543 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 SPDL1Q96EA4 605 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 FAM207AQ9NSI2 230 aaPredicted RBP13.66□□□□□ -0.22
USP11-206ENST00000469080 MRFAP1Q9Y605 127 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 MYH13Q9UKX3 1938 aa13.66□□□□□ -0.22
USP11-206ENST00000469080 SFI1A8K8P3 1242 aa13.65□□□□□ -0.22
USP11-206ENST00000469080 KIAA0754O94854 1291 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms