RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 PFKFB2O60825 505 aa26.83■■□□□ 1.89
SUMO3-205ENST00000466861 SCG2P13521 617 aa26.83■■□□□ 1.89
SUMO3-205ENST00000466861 WWC2Q6AWC2 1192 aa26.83■■□□□ 1.89
SUMO3-205ENST00000466861 TRIM22Q8IYM9 498 aa26.83■■□□□ 1.89
SUMO3-205ENST00000466861 KIF2CQ99661 725 aa26.83■■□□□ 1.89
SUMO3-205ENST00000466861 SLKQ9H2G2 1235 aaPredicted RBP26.83■■□□□ 1.89
SUMO3-205ENST00000466861 hCG_1642624A0A1W2PR95 340 aa26.82■■□□□ 1.88
SUMO3-205ENST00000466861 CDKL5O76039 1030 aa26.82■■□□□ 1.88
SUMO3-205ENST00000466861 NKX3-2P78367 333 aa26.82■■□□□ 1.88
SUMO3-205ENST00000466861 STXBP2Q15833 593 aa26.82■■□□□ 1.88
SUMO3-205ENST00000466861 TAPT1Q6NXT6 567 aa26.82■■□□□ 1.88
SUMO3-205ENST00000466861 FAM177A1Q8N128 213 aaPredicted RBP26.82■■□□□ 1.88
SUMO3-205ENST00000466861 CCDC12Q8WUD4 166 aaPredicted RBP26.82■■□□□ 1.88
SUMO3-205ENST00000466861 TPCN1Q9ULQ1 816 aa26.82■■□□□ 1.88
SUMO3-205ENST00000466861 Q9Y3F1 56 aa26.82■■□□□ 1.88
SUMO3-205ENST00000466861 FRMPD4Q14CM0 1322 aa26.82■■□□□ 1.88
SUMO3-205ENST00000466861 BRCA2P51587 3418 aa26.81■■□□□ 1.88
SUMO3-205ENST00000466861 DNM1LO00429 736 aa26.81■■□□□ 1.88
SUMO3-205ENST00000466861 MEIS2O14770 477 aa26.81■■□□□ 1.88
SUMO3-205ENST00000466861 HOXA13P31271 388 aaPredicted RBP26.81■■□□□ 1.88
SUMO3-205ENST00000466861 NECAB2Q7Z6G3 386 aa26.81■■□□□ 1.88
SUMO3-205ENST00000466861 SMARCC2Q8TAQ2 1214 aa26.81■■□□□ 1.88
SUMO3-205ENST00000466861 PDCD2LQ9BRP1 358 aa26.81■■□□□ 1.88
SUMO3-205ENST00000466861 NCOA5Q9HCD5 579 aaKnown RBP26.81■■□□□ 1.88
SUMO3-205ENST00000466861 XPNPEP3Q9NQH7 507 aa26.81■■□□□ 1.88
SUMO3-205ENST00000466861 KIAA1217Q5T5P2 1943 aa26.8■■□□□ 1.88
SUMO3-205ENST00000466861 ESYT2A0FGR8 921 aa26.8■■□□□ 1.88
SUMO3-205ENST00000466861 STXBP3O00186 592 aa26.8■■□□□ 1.88
SUMO3-205ENST00000466861 EIF3JO75822 258 aaKnown RBP26.8■■□□□ 1.88
SUMO3-205ENST00000466861 NR3C2P08235 984 aa26.8■■□□□ 1.88
SUMO3-205ENST00000466861 MNX1P50219 401 aaPredicted RBP26.8■■□□□ 1.88
SUMO3-205ENST00000466861 NAPAP54920 295 aa26.8■■□□□ 1.88
SUMO3-205ENST00000466861 TNFAIP2Q03169 654 aa26.8■■□□□ 1.88
SUMO3-205ENST00000466861 RABEP1Q15276 862 aa26.8■■□□□ 1.88
SUMO3-205ENST00000466861 PKN1Q16512 942 aa26.8■■□□□ 1.88
SUMO3-205ENST00000466861 FBXO16Q8IX29 292 aaPredicted RBP26.8■■□□□ 1.88
SUMO3-205ENST00000466861 GPKOWQ92917 476 aaPredicted RBP eCLIP26.8■■□□□ 1.88
SUMO3-205ENST00000466861 BACH2Q9BYV9 841 aa26.8■■□□□ 1.88
SUMO3-205ENST00000466861 NKRFO15226 690 aaKnown RBP eCLIP26.79■■□□□ 1.88
SUMO3-205ENST00000466861 STAM2O75886 525 aa26.79■■□□□ 1.88
SUMO3-205ENST00000466861 SSRP1Q08945 709 aaKnown RBP26.79■■□□□ 1.88
SUMO3-205ENST00000466861 MCTP2Q6DN12 878 aa26.79■■□□□ 1.88
SUMO3-205ENST00000466861 XRRA1Q6P2D8 792 aa26.79■■□□□ 1.88
SUMO3-205ENST00000466861 RNF180Q86T96 592 aa26.79■■□□□ 1.88
SUMO3-205ENST00000466861 SCFD2Q8WU76 684 aa26.79■■□□□ 1.88
SUMO3-205ENST00000466861 PHKBQ93100 1093 aa26.79■■□□□ 1.88
SUMO3-205ENST00000466861 LARP6Q9BRS8 491 aaKnown RBP26.79■■□□□ 1.88
SUMO3-205ENST00000466861 UPF3AQ9H1J1 476 aaKnown RBP26.79■■□□□ 1.88
SUMO3-205ENST00000466861 SPC25Q9HBM1 224 aa26.79■■□□□ 1.88
SUMO3-205ENST00000466861 RIC8AQ9NPQ8 531 aa26.79■■□□□ 1.88
SUMO3-205ENST00000466861 SH3GLB2Q9NR46 395 aa26.79■■□□□ 1.88
SUMO3-205ENST00000466861 EIF2AK2P19525 551 aaKnown RBP26.78■■□□□ 1.88
SUMO3-205ENST00000466861 CST5P28325 142 aaPredicted RBP26.78■■□□□ 1.88
SUMO3-205ENST00000466861 GJA9P57773 515 aa26.78■■□□□ 1.88
SUMO3-205ENST00000466861 SCRN1Q12765 414 aa26.78■■□□□ 1.88
SUMO3-205ENST00000466861 PGM5Q15124 567 aa26.78■■□□□ 1.88
SUMO3-205ENST00000466861 VSIG10LQ86VR7 867 aa26.78■■□□□ 1.88
SUMO3-205ENST00000466861 FCHSD1Q86WN1 690 aa26.78■■□□□ 1.88
SUMO3-205ENST00000466861 TBC1D32Q96NH3 1257 aa26.78■■□□□ 1.88
SUMO3-205ENST00000466861 SLC26A6Q9BXS9 759 aa26.78■■□□□ 1.88
SUMO3-205ENST00000466861 GNEQ9Y223 722 aaKnown RBP26.78■■□□□ 1.88
SUMO3-205ENST00000466861 ADAMTS4O75173 837 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 DEXIO95424 95 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 FOSP01100 380 aaPredicted RBP26.77■■□□□ 1.88
SUMO3-205ENST00000466861 COL6A1P12109 1028 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 ADCYAP1R1P41586 468 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 ADCY7P51828 1080 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 STK3Q13188 491 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 LRRC41Q15345 812 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 DUSP28Q4G0W2 176 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 TYW1BQ6NUM6 668 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 USP17L6PQ6QN14 398 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 EEPD1Q7L9B9 569 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 CCDC148Q8NFR7 591 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 TSEN34Q9BSV6 310 aaKnown RBP26.77■■□□□ 1.88
SUMO3-205ENST00000466861 HTATIP2Q9BUP3 242 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 ZMYND12Q9H0C1 365 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 LIMCH1Q9UPQ0 1083 aa26.77■■□□□ 1.88
SUMO3-205ENST00000466861 STK36Q9NRP7 1315 aa26.76■■□□□ 1.87
SUMO3-205ENST00000466861 KBTBD13C9JR72 458 aa26.76■■□□□ 1.87
SUMO3-205ENST00000466861 CCND2P30279 289 aa26.76■■□□□ 1.87
SUMO3-205ENST00000466861 ANO1Q5XXA6 986 aa26.76■■□□□ 1.87
SUMO3-205ENST00000466861 KCNV1Q6PIU1 500 aa26.76■■□□□ 1.87
SUMO3-205ENST00000466861 KLHDC9Q8NEP7 349 aa26.76■■□□□ 1.87
SUMO3-205ENST00000466861 PAWRQ96IZ0 340 aaKnown RBP26.76■■□□□ 1.87
SUMO3-205ENST00000466861 WDR11Q9BZH6 1224 aa26.76■■□□□ 1.87
SUMO3-205ENST00000466861 EHMT1Q9H9B1 1298 aa26.76■■□□□ 1.87
SUMO3-205ENST00000466861 PDGFCQ9NRA1 345 aa26.76■■□□□ 1.87
SUMO3-205ENST00000466861 SYNRGQ9UMZ2 1314 aa26.75■■□□□ 1.87
SUMO3-205ENST00000466861 PDE4DIPQ5VU43 2346 aa26.75■■□□□ 1.87
SUMO3-205ENST00000466861 SMCO2A6NFE2 343 aa26.75■■□□□ 1.87
SUMO3-205ENST00000466861 SPDYE3A6NKU9 549 aa26.75■■□□□ 1.87
SUMO3-205ENST00000466861 GNA11P29992 359 aa26.75■■□□□ 1.87
SUMO3-205ENST00000466861 AP3B2Q13367 1082 aa26.75■■□□□ 1.87
SUMO3-205ENST00000466861 TTLL4Q14679 1199 aa26.75■■□□□ 1.87
SUMO3-205ENST00000466861 ME3Q16798 604 aa26.75■■□□□ 1.87
SUMO3-205ENST00000466861 GTF3C6Q969F1 213 aa26.75■■□□□ 1.87
SUMO3-205ENST00000466861 ZSCAN31Q96LW9 406 aaPredicted RBP26.75■■□□□ 1.87
SUMO3-205ENST00000466861 C11orf49Q9H6J7 331 aa26.75■■□□□ 1.87
SUMO3-205ENST00000466861 DDX49Q9Y6V7 483 aaKnown RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms