RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 ORC4O43929 436 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 SLC3A2P08195 630 aaKnown RBP9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 RABGGTBP53611 331 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 DUSP28Q4G0W2 176 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 IER5LQ5T953 404 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 IQSEC1Q6DN90 963 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 TTBK2Q6IQ55 1244 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 CWC27Q6UX04 472 aaKnown RBP9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 NSMFQ6X4W1 530 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 SLC30A10Q6XR72 485 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 NOL8Q76FK4 1167 aaKnown RBP9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 OTOP2Q7RTS6 562 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 TBC1D10CQ8IV04 446 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 DCAF4Q8WV16 495 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 PPM1EQ8WY54 764 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 SCLYQ96I15 445 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 SEZ6LQ9BYH1 1024 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 AP5M1Q9H0R1 490 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 ALDH8A1Q9H2A2 487 aaPredicted RBP9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 DIAPH3Q9NSV4 1193 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 TRMT13Q9NUP7 481 aaKnown RBP9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 WDFY4Q6ZS81 3184 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 DOCK5Q9H7D0 1870 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 TTLL13PA6NNM8 815 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 HIP1O00291 1037 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 RANBP6O60518 1105 aaKnown RBP9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 FGBP02675 491 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 MYOGP15173 224 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 CHMLP26374 656 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 SLC16A2P36021 539 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 HAND2P61296 217 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 PURAQ00577 322 aaKnown RBP9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 BAATQ14032 418 aaPredicted RBP9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 TTLL4Q14679 1199 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 CCDC96Q2M329 555 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 PPP4R3BQ5MIZ7 849 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 SYDE2Q5VT97 1194 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 KIAA1211Q6ZU35 1233 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 ATXN2LQ8WWM7 1075 aaKnown RBP9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 CLEC4DQ8WXI8 215 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 ASB2Q96Q27 587 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 TMEM47Q9BQJ4 181 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 MSRAQ9UJ68 235 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 TRPC6Q9Y210 931 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 MTMR7Q9Y216 660 aa9.32□□□□□ -0.92
CDC42BPA-210ENST00000462553 BAZ2BQ9UIF8 2168 aaKnown RBP9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 TNKSO95271 1327 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 FRMPD2Q68DX3 1309 aaPredicted RBP9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 RAD50Q92878 1312 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 LOC102724159A0A0B4J2E5 919 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 ZEB2O60315 1214 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 ARHGEF15O94989 841 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 CYP2C9P11712 490 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 EDNRBP24530 442 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 MFAP1P55081 439 aaKnown RBP9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 PWP2Q15269 919 aaKnown RBP9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 CCDC85BQ15834 202 aaPredicted RBP9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 PLCD3Q8N3E9 789 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 ADAMTS19Q8TE59 1207 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 PPP1R13LQ8WUF5 828 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 DSCC1Q9BVC3 393 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 MTIF3Q9H2K0 278 aaKnown RBP9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 SLC28A3Q9HAS3 691 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 PCDHA11Q9Y5I1 949 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 NLRC5Q86WI3 1866 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 NEDD4P46934 1319 aa9.31□□□□□ -0.92
CDC42BPA-210ENST00000462553 EPOPA6NHQ4 379 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 ARIH2O95376 493 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 SNHG28P0DPA3 235 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 PDHBP11177 359 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 TOP1P11387 765 aaKnown RBP9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 IGFBP4P22692 258 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 PPP2R2DQ66LE6 453 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 RASEFQ8IZ41 740 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 OR6J1Q8NGC5 347 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 COPS5Q92905 334 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 CTAGE1Q96RT6 745 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 WDR11Q9BZH6 1224 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 TCP11L1Q9NUJ3 509 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 POLR3EQ9NVU0 708 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 ADD3Q9UEY8 706 aaKnown RBP9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 RAPGEFL1Q9UHV5 662 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 SLC4A7Q9Y6M7 1214 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 WDR19Q8NEZ3 1342 aa9.3□□□□□ -0.92
CDC42BPA-210ENST00000462553 PIEZO1Q92508 2521 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 MUC6Q6W4X9 2439 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 PTPDC1A2A3K4 754 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 A6NJR5 290 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 ZBBXA8MT70 800 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 RBAK-RBAKDNI3L0D1 243 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 SGSM2O43147 1006 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 CA3P07451 260 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 PFKMP08237 780 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 MYL3P08590 195 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 ATP2A2P16615 1042 aaKnown RBP9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 COL9A1P20849 921 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 CALML3P27482 149 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 CPT1AP50416 773 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 RPS6P62753 249 aaKnown RBP9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 MRPS5P82675 430 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms