RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 SRGAP2O75044 1071 aa18.88■□□□□ 0.61
ACTB-207ENST00000462494 ERCC3P19447 782 aa18.88■□□□□ 0.61
ACTB-207ENST00000462494 FXR2P51116 673 aaKnown RBP eCLIP18.88■□□□□ 0.612e-53■■□□□ 12.2
ACTB-207ENST00000462494 VSNL1P62760 191 aa18.88■□□□□ 0.61
ACTB-207ENST00000462494 FAM193AP78312 1265 aa18.88■□□□□ 0.61
ACTB-207ENST00000462494 CYP27A1Q02318 531 aa18.88■□□□□ 0.61
ACTB-207ENST00000462494 TRAPPC11Q7Z392 1133 aa18.88■□□□□ 0.61
ACTB-207ENST00000462494 HNRNPLLQ8WVV9 542 aaKnown RBP18.88■□□□□ 0.61
ACTB-207ENST00000462494 NUDT12Q9BQG2 462 aa18.88■□□□□ 0.61
ACTB-207ENST00000462494 RAB34Q9BZG1 259 aa18.88■□□□□ 0.61
ACTB-207ENST00000462494 SUGCTQ9HAC7 445 aa18.88■□□□□ 0.61
ACTB-207ENST00000462494 DDX4Q9NQI0 724 aaKnown RBP18.88■□□□□ 0.61
ACTB-207ENST00000462494 STK17AQ9UEE5 414 aa18.88■□□□□ 0.61
ACTB-207ENST00000462494 RCCD1A6NED2 376 aa18.87■□□□□ 0.61
ACTB-207ENST00000462494 KRT79Q5XKE5 535 aa18.87■□□□□ 0.61
ACTB-207ENST00000462494 CENPPQ6IPU0 288 aa18.87■□□□□ 0.61
ACTB-207ENST00000462494 UNC13DQ70J99 1090 aa18.87■□□□□ 0.61
ACTB-207ENST00000462494 CAPZA3Q96KX2 299 aa18.87■□□□□ 0.61
ACTB-207ENST00000462494 LACRTQ9GZZ8 138 aa18.87■□□□□ 0.61
ACTB-207ENST00000462494 RNF216Q9NWF9 866 aaPredicted RBP18.87■□□□□ 0.61
ACTB-207ENST00000462494 MPHOSPH10O00566 681 aaKnown RBP18.86■□□□□ 0.61
ACTB-207ENST00000462494 EDIL3O43854 480 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 MARCH6O60337 910 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 TTLL1O95922 423 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 TTBK2Q6IQ55 1244 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 HDXQ7Z353 690 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 ZSCAN29Q8IWY8 852 aaPredicted RBP18.86■□□□□ 0.61
ACTB-207ENST00000462494 ADGRF4Q8IZF3 695 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 GJA10Q969M2 543 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 MXD3Q9BW11 206 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 JMJD4Q9H9V9 463 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 SAR1BQ9Y6B6 198 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 DUSP10Q9Y6W6 482 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 MACROD2A1Z1Q3 448 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 MAP2K7O14733 419 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 CYP2C19P33261 490 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 SLC16A2P36021 539 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 GABPAQ06546 454 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 CCDC96Q2M329 555 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 VWA3BQ502W6 1294 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 CCDC170Q8IYT3 715 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 RAD54LQ92698 747 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 UIMC1Q96RL1 719 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 ERGIC2Q96RQ1 377 aa18.86■□□□□ 0.61
ACTB-207ENST00000462494 FAM207AQ9NSI2 230 aaPredicted RBP18.86■□□□□ 0.61
ACTB-207ENST00000462494 PNMA6FA0A0J9YX94 578 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 EIF3CLB5ME19 914 aaKnown RBP18.85■□□□□ 0.61
ACTB-207ENST00000462494 SCNN1DP51172 638 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 GYS2P54840 703 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 LRRC41Q15345 812 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 GPIHBP1Q8IV16 184 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 EHBP1Q8NDI1 1231 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 DDX12PQ92771 950 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 CCDC42Q96M95 316 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 EIF3CQ99613 913 aaKnown RBP18.85■□□□□ 0.61
ACTB-207ENST00000462494 USP40Q9NVE5 1235 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.85■□□□□ 0.61
ACTB-207ENST00000462494 SERPINB13Q9UIV8 391 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 THSD7AQ9UPZ6 1657 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 EP400Q96L91 3159 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 PLIN4Q96Q06 1357 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 PVALEFA0A1B0GWK0 134 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 H3BQF6 201 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 RAD21O60216 631 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 PLEKP08567 350 aaPredicted RBP18.85■□□□□ 0.61
ACTB-207ENST00000462494 DDR1Q08345 913 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 ZNF543Q08ER8 600 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 COBLL1Q53SF7 1204 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 KCTD1Q719H9 257 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 KCNK18Q7Z418 384 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 NDST4Q9H3R1 872 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 MMRN2Q9H8L6 949 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 PDE11AQ9HCR9 933 aa18.85■□□□□ 0.61
ACTB-207ENST00000462494 DDX25Q9UHL0 483 aaKnown RBP18.85■□□□□ 0.61
ACTB-207ENST00000462494 PPEF1O14829 653 aaPredicted RBP18.84■□□□□ 0.61
ACTB-207ENST00000462494 PPP1R11O60927 126 aaPredicted RBP18.84■□□□□ 0.61
ACTB-207ENST00000462494 SNHG28P0DPA3 235 aa18.84■□□□□ 0.61
ACTB-207ENST00000462494 PDIA5Q14554 519 aa18.84■□□□□ 0.61
ACTB-207ENST00000462494 C2CD5Q86YS7 1000 aa18.84■□□□□ 0.61
ACTB-207ENST00000462494 GJD4Q96KN9 370 aaPredicted RBP18.84■□□□□ 0.61
ACTB-207ENST00000462494 MMS19Q96T76 1030 aa18.84■□□□□ 0.61
ACTB-207ENST00000462494 RIC8AQ9NPQ8 531 aa18.84■□□□□ 0.61
ACTB-207ENST00000462494 A0A1W2PQJ5 194 aa18.84■□□□□ 0.61
ACTB-207ENST00000462494 CCDC66A2RUB6 948 aa18.84■□□□□ 0.61
ACTB-207ENST00000462494 HOXA10P31260 410 aaPredicted RBP18.84■□□□□ 0.61
ACTB-207ENST00000462494 SPA17Q15506 151 aa18.84■□□□□ 0.61
ACTB-207ENST00000462494 KRT26Q7Z3Y9 468 aa18.84■□□□□ 0.61
ACTB-207ENST00000462494 GLIS3Q8NEA6 775 aa18.84■□□□□ 0.61
ACTB-207ENST00000462494 CRAMP1Q96RY5 1269 aa18.84■□□□□ 0.61
ACTB-207ENST00000462494 L1RE1Q9UN81 338 aa18.84■□□□□ 0.61
ACTB-207ENST00000462494 IGKV6D-41A0A0C4DH26 115 aa18.83■□□□□ 0.6
ACTB-207ENST00000462494 EPHB6O15197 1021 aa18.83■□□□□ 0.6
ACTB-207ENST00000462494 SSBP05455 408 aaKnown RBP eCLIP18.83■□□□□ 0.6
ACTB-207ENST00000462494 SLURP2P0DP57 97 aa18.83■□□□□ 0.6
ACTB-207ENST00000462494 KIF5AQ12840 1032 aa18.83■□□□□ 0.6
ACTB-207ENST00000462494 GPS2Q13227 327 aa18.83■□□□□ 0.6
ACTB-207ENST00000462494 ECM1Q16610 540 aa18.83■□□□□ 0.6
ACTB-207ENST00000462494 DOK7Q18PE1 504 aa18.83■□□□□ 0.6
ACTB-207ENST00000462494 FIGNQ5HY92 759 aa18.83■□□□□ 0.6
ACTB-207ENST00000462494 GUF1Q8N442 669 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms