RNA–Protein interactions for RNA: ENST00000462394.1

LDLRAP1-202, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 369 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-202ENST00000462394 CHST13Q8NET6 341 aa5.04□□□□□ -1.6
LDLRAP1-202ENST00000462394 CTAGE1Q96RT6 745 aa5.04□□□□□ -1.6
LDLRAP1-202ENST00000462394 CRBNQ96SW2 442 aa5.04□□□□□ -1.6
LDLRAP1-202ENST00000462394 MTG1Q9BT17 334 aaPredicted RBP5.04□□□□□ -1.6
LDLRAP1-202ENST00000462394 PHF7Q9BWX1 381 aaPredicted RBP5.04□□□□□ -1.6
LDLRAP1-202ENST00000462394 PCDHGC5Q9Y5F6 944 aa5.04□□□□□ -1.6
LDLRAP1-202ENST00000462394 DNAH14Q0VDD8 3507 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 EP300Q09472 2414 aaPredicted RBP5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 SIP14410 1827 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 USP17L12C9JPN9 530 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 USP17L21D6R901 530 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 NBNO60934 754 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 NUDT7P0C024 238 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 CPT1AP50416 773 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 OAZ1P54368 228 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 RRP1P56182 461 aaKnown RBP5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 DYNLL1P63167 89 aaKnown RBP5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 TFCP2Q12800 502 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 MMRN1Q13201 1228 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 CLUL1Q15846 466 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 DUSP28Q4G0W2 176 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 LRRC8DQ7L1W4 858 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 SESTD1Q86VW0 696 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 WDR63Q8IWG1 891 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 UBALD2Q8IYN6 164 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 ANKRD35Q8N283 1001 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 PRPF38AQ8NAV1 312 aaKnown RBP5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 MORC4Q8TE76 937 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 ZNF512BQ96KM6 892 aaPredicted RBP5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 CCDC17Q96LX7 622 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 CLEC1BQ9P126 229 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 SWAP70Q9UH65 585 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 CDK5RAP2Q96SN8 1893 aa5.03□□□□□ -1.6
LDLRAP1-202ENST00000462394 DMDP11532 3685 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 COL11A1P12107 1806 aaPredicted RBP5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 FOCADQ5VW36 1801 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 PTPRCP08575 1304 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 CEP250Q9BV73 2442 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 PTPRSQ13332 1948 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 ZNFX1Q9P2E3 1918 aaKnown RBP5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 RBM47A0AV96 593 aaKnown RBP5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 A6NJR5 290 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 MPHOSPH10O00566 681 aaKnown RBP5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 LINC01565O15544 149 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 AMHP03971 560 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 CYP2E1P05181 493 aaPredicted RBP5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 LINC00271P0C7V0 271 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 PTGS1P23219 599 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 USP5P45974 858 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 CNTN2Q02246 1040 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 ICA1Q05084 483 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 TMEM63BQ5T3F8 832 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 KIAA0319Q5VV43 1072 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 TRAF7Q6Q0C0 670 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 KIAA2013Q8IYS2 634 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 EFHBQ8N7U6 833 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 SUSD6Q92537 303 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 DHX38Q92620 1227 aaKnown RBP5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 RUBCNQ92622 972 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 TOP1MTQ969P6 601 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 HAUS7Q99871 368 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 SLF1Q9BQI6 1058 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 C11orf84Q9BUA3 381 aaPredicted RBP5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 SLC38A10Q9HBR0 1119 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 VTA1Q9NP79 307 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 GPHNQ9NQX3 736 aaPredicted RBP5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 PDGFCQ9NRA1 345 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 PA2G4Q9UQ80 394 aaKnown RBP5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 HDAC5Q9UQL6 1122 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 USP15Q9Y4E8 981 aaPredicted RBP5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 FAM208BQ5VWN6 2430 aa5.02□□□□□ -1.61
LDLRAP1-202ENST00000462394 FASNP49327 2511 aaKnown RBP5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 MAP1BP46821 2468 aaKnown RBP5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 SCN5AQ14524 2016 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 TANC1Q9C0D5 1861 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 LOC102724159A0A0B4J2E5 919 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 GRM6O15303 877 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 ZBED4O75132 1171 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 LGR5O75473 907 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 MMP1P03956 469 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 ADRB1P08588 477 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 UBTFL1P0CB47 393 aaPredicted RBP5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 FDX1P10109 184 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 CKBP12277 381 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 EEF2P13639 858 aaKnown RBP5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 CYP7A1P22680 504 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 GTF2F1P35269 517 aaKnown RBP eCLIP5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 BMPR1AP36894 532 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 NDUFV1P49821 464 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 MTX1Q13505 466 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 CAMK1Q14012 370 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 PWP2Q15269 919 aaKnown RBP5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 PTGISQ16647 500 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 RSPO4Q2I0M5 234 aaPredicted RBP5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 TRIM71Q2Q1W2 868 aaKnown RBP5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 BRDTQ58F21 947 aaPredicted RBP5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 FAM47CQ5HY64 1035 aa5.01□□□□□ -1.61
LDLRAP1-202ENST00000462394 FAM83BQ5T0W9 1011 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms