RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 PIGSQ96S52 555 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 MYL10Q9BUA6 226 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 RIOX1Q9H6W3 641 aa11.81□□□□□ -0.52
SF3A3-204ENST00000462258 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
SF3A3-204ENST00000462258 TANC1Q9C0D5 1861 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 CCDC69A6NI79 296 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 ARVCFO00192 962 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 KIAA0355O15063 1070 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 NKRFO15226 690 aaKnown RBP eCLIP11.8□□□□□ -0.52
SF3A3-204ENST00000462258 CABYRO75952 493 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 RAG1P15918 1043 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 EIF2AK2P19525 551 aaKnown RBP11.8□□□□□ -0.52
SF3A3-204ENST00000462258 CPT1AP50416 773 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 HSD17B4P51659 736 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 GHRHRQ02643 423 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 FAAP100Q0VG06 881 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 LRIT3Q3SXY7 679 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 NFXL1Q6ZNB6 911 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 OR6J1Q8NGC5 347 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 NSUN6Q8TEA1 469 aaKnown RBP11.8□□□□□ -0.52
SF3A3-204ENST00000462258 TAAR1Q96RJ0 339 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 RMDN3Q96TC7 470 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 MAP3K14Q99558 947 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 TMEM39AQ9NV64 488 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 PCDHA1Q9Y5I3 950 aa11.8□□□□□ -0.52
SF3A3-204ENST00000462258 TLR3O15455 904 aaKnown RBP11.79□□□□□ -0.52
SF3A3-204ENST00000462258 ARIH2O95376 493 aa11.79□□□□□ -0.52
SF3A3-204ENST00000462258 ITGB8P26012 769 aa11.79□□□□□ -0.52
SF3A3-204ENST00000462258 KIF5BP33176 963 aa11.79□□□□□ -0.52
SF3A3-204ENST00000462258 CDK7P50613 346 aa11.79□□□□□ -0.52
SF3A3-204ENST00000462258 TRAF1Q13077 416 aa11.79□□□□□ -0.52
SF3A3-204ENST00000462258 TTLL4Q14679 1199 aa11.79□□□□□ -0.52
SF3A3-204ENST00000462258 ARHGEF16Q5VV41 709 aa11.79□□□□□ -0.52
SF3A3-204ENST00000462258 FAM126BQ8IXS8 530 aa11.79□□□□□ -0.52
SF3A3-204ENST00000462258 IWS1Q96ST2 819 aa11.79□□□□□ -0.52
SF3A3-204ENST00000462258 SPZ1Q9BXG8 430 aa11.79□□□□□ -0.52
SF3A3-204ENST00000462258 LRRC2Q9BYS8 371 aa11.79□□□□□ -0.52
SF3A3-204ENST00000462258 PXMP2Q9NR77 195 aa11.79□□□□□ -0.52
SF3A3-204ENST00000462258 POLR3EQ9NVU0 708 aa11.79□□□□□ -0.52
SF3A3-204ENST00000462258 TBX21Q9UL17 535 aa11.79□□□□□ -0.52
SF3A3-204ENST00000462258 PNMA6FA0A0J9YX94 578 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 PLEKHA8P1O95397 391 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 CALM1P0DP23 149 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 CALM2P0DP24 149 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 CALM3P0DP25 149 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 TXNP10599 105 aaKnown RBP11.78□□□□□ -0.52
SF3A3-204ENST00000462258 RXRAP19793 462 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 HOXA13P31271 388 aaPredicted RBP11.78□□□□□ -0.52
SF3A3-204ENST00000462258 LIFRP42702 1097 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 PSMC6P62333 389 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 PURAQ00577 322 aaKnown RBP11.78□□□□□ -0.52
SF3A3-204ENST00000462258 ITGA7Q13683 1181 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 STXBP2Q15833 593 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 BRDTQ58F21 947 aaPredicted RBP11.78□□□□□ -0.52
SF3A3-204ENST00000462258 SEPT14Q6ZU15 432 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 MICU3Q86XE3 530 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 TMTC2Q8N394 836 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 SLC43A3Q8NBI5 491 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 PIBF1Q8WXW3 757 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 COPS5Q92905 334 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 MAP3K20Q9NYL2 800 aaKnown RBP11.78□□□□□ -0.52
SF3A3-204ENST00000462258 SEC63Q9UGP8 760 aaKnown RBP11.78□□□□□ -0.52
SF3A3-204ENST00000462258 SLC12A7Q9Y666 1083 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 LAMA2P24043 3122 aaKnown RBP11.78□□□□□ -0.52
SF3A3-204ENST00000462258 MYH7BA7E2Y1 1941 aa11.78□□□□□ -0.52
SF3A3-204ENST00000462258 DOCK5Q9H7D0 1870 aa11.77□□□□□ -0.53
SF3A3-204ENST00000462258 GCOM1H8Y6P7 765 aaPredicted RBP11.77□□□□□ -0.53
SF3A3-204ENST00000462258 MYL3P08590 195 aa11.77□□□□□ -0.53
SF3A3-204ENST00000462258 POLR2MP0CAP2 368 aa11.77□□□□□ -0.53
SF3A3-204ENST00000462258 GNAQP50148 359 aa11.77□□□□□ -0.53
SF3A3-204ENST00000462258 FPGSQ05932 587 aa11.77□□□□□ -0.53
SF3A3-204ENST00000462258 C9orf50Q5SZB4 431 aa11.77□□□□□ -0.53
SF3A3-204ENST00000462258 SGMS1Q86VZ5 419 aa11.77□□□□□ -0.53
SF3A3-204ENST00000462258 RAB11FIP4Q86YS3 637 aa11.77□□□□□ -0.53
SF3A3-204ENST00000462258 SAMD3Q8N6K7 520 aa11.77□□□□□ -0.53
SF3A3-204ENST00000462258 RRP36Q96EU6 259 aaKnown RBP11.77□□□□□ -0.53
SF3A3-204ENST00000462258 NEK1Q96PY6 1258 aa11.77□□□□□ -0.53
SF3A3-204ENST00000462258 LZTS2Q9BRK4 669 aa11.77□□□□□ -0.53
SF3A3-204ENST00000462258 PDCD2LQ9BRP1 358 aa11.77□□□□□ -0.53
SF3A3-204ENST00000462258 SEZ6LQ9BYH1 1024 aa11.77□□□□□ -0.53
SF3A3-204ENST00000462258 GRIN2DO15399 1336 aa11.77□□□□□ -0.53
SF3A3-204ENST00000462258 A6NJR5 290 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 TIMP1P01033 207 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 GH1P01241 217 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 CD4P01730 458 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 NR3C2P08235 984 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 KRT32Q14532 448 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 PGM5Q15124 567 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 SHHQ15465 462 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 GPR153Q6NV75 609 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 CCDC62Q6P9F0 684 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 TMTC3Q6ZXV5 915 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 RASEFQ8IZ41 740 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 IL31RAQ8NI17 732 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 TCEANC2Q96MN5 208 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 MTG1Q9BT17 334 aaPredicted RBP11.76□□□□□ -0.53
SF3A3-204ENST00000462258 PPP1R12CQ9BZL4 782 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 MRVI1Q9Y6F6 885 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 FRMPD4Q14CM0 1322 aa11.76□□□□□ -0.53
SF3A3-204ENST00000462258 B4GALT4O60513 344 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms