RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 CPLX1O14810 134 aa11.47□□□□□ -0.57
VPS45-204ENST00000460366 PPP1R11O60927 126 aaPredicted RBP11.47□□□□□ -0.57
VPS45-204ENST00000460366 ADORA2AP29274 412 aa11.47□□□□□ -0.57
VPS45-204ENST00000460366 SLC4A3P48751 1232 aa11.47□□□□□ -0.57
VPS45-204ENST00000460366 AKAP17AQ02040 695 aaKnown RBP11.47□□□□□ -0.57
VPS45-204ENST00000460366 GHRHRQ02643 423 aa11.47□□□□□ -0.57
VPS45-204ENST00000460366 PRKCZQ05513 592 aa11.47□□□□□ -0.57
VPS45-204ENST00000460366 SCRN1Q12765 414 aa11.47□□□□□ -0.57
VPS45-204ENST00000460366 TSR1Q2NL82 804 aaKnown RBP11.47□□□□□ -0.57
VPS45-204ENST00000460366 COL13A1Q5TAT6 717 aaPredicted RBP11.47□□□□□ -0.57
VPS45-204ENST00000460366 FBXO46Q6PJ61 603 aaPredicted RBP11.47□□□□□ -0.57
VPS45-204ENST00000460366 HOMER1Q86YM7 354 aa11.47□□□□□ -0.57
VPS45-204ENST00000460366 FAM177A1Q8N128 213 aaPredicted RBP11.47□□□□□ -0.57
VPS45-204ENST00000460366 CMTR1Q8N1G2 835 aaKnown RBP11.47□□□□□ -0.57
VPS45-204ENST00000460366 CCDC82Q8N4S0 544 aa11.47□□□□□ -0.57
VPS45-204ENST00000460366 PXYLP1Q8TE99 480 aa11.47□□□□□ -0.57
VPS45-204ENST00000460366 DDX11Q96FC9 970 aa11.47□□□□□ -0.57
VPS45-204ENST00000460366 NCOA5Q9HCD5 579 aaKnown RBP11.47□□□□□ -0.57
VPS45-204ENST00000460366 BAZ2BQ9UIF8 2168 aaKnown RBP11.46□□□□□ -0.57
VPS45-204ENST00000460366 LOC102724159A0A0B4J2E5 919 aa11.46□□□□□ -0.57
VPS45-204ENST00000460366 COBLO75128 1261 aa11.46□□□□□ -0.57
VPS45-204ENST00000460366 SSRP1Q08945 709 aaKnown RBP11.46□□□□□ -0.57
VPS45-204ENST00000460366 STK3Q13188 491 aa11.46□□□□□ -0.57
VPS45-204ENST00000460366 PWP2Q15269 919 aaKnown RBP11.46□□□□□ -0.57
VPS45-204ENST00000460366 PFKFB3Q16875 520 aaPredicted RBP11.46□□□□□ -0.57
VPS45-204ENST00000460366 USH1GQ495M9 461 aa11.46□□□□□ -0.57
VPS45-204ENST00000460366 MUM1L1Q5H9M0 696 aa11.46□□□□□ -0.57
VPS45-204ENST00000460366 DPP9Q86TI2 863 aa11.46□□□□□ -0.57
VPS45-204ENST00000460366 TRIM22Q8IYM9 498 aa11.46□□□□□ -0.57
VPS45-204ENST00000460366 ANKRD35Q8N283 1001 aa11.46□□□□□ -0.57
VPS45-204ENST00000460366 MSL3Q8N5Y2 521 aaKnown RBP11.46□□□□□ -0.57
VPS45-204ENST00000460366 RAET1EQ8TD07 263 aa11.46□□□□□ -0.57
VPS45-204ENST00000460366 GTF3C6Q969F1 213 aa11.46□□□□□ -0.57
VPS45-204ENST00000460366 APBA2Q99767 749 aa11.46□□□□□ -0.57
VPS45-204ENST00000460366 A1CFQ9NQ94 594 aaKnown RBP11.46□□□□□ -0.57
VPS45-204ENST00000460366 HOMER2Q9NSB8 354 aa11.46□□□□□ -0.57
VPS45-204ENST00000460366 CYP39A1Q9NYL5 469 aa11.46□□□□□ -0.57
VPS45-204ENST00000460366 GABRQQ9UN88 632 aa11.46□□□□□ -0.57
VPS45-204ENST00000460366 COL11A1P12107 1806 aaPredicted RBP11.46□□□□□ -0.58
VPS45-204ENST00000460366 DOCK3Q8IZD9 2030 aa11.45□□□□□ -0.58
VPS45-204ENST00000460366 STK36Q9NRP7 1315 aa11.45□□□□□ -0.58
VPS45-204ENST00000460366 NFIBO00712 420 aa11.45□□□□□ -0.58
VPS45-204ENST00000460366 IGHA2P01877 340 aa11.45□□□□□ -0.58
VPS45-204ENST00000460366 SCG2P13521 617 aa11.45□□□□□ -0.58
VPS45-204ENST00000460366 ZNF792Q3KQV3 632 aa11.45□□□□□ -0.58
VPS45-204ENST00000460366 OLFML2BQ68BL8 750 aa11.45□□□□□ -0.58
VPS45-204ENST00000460366 PPP1R18Q6NYC8 613 aa11.45□□□□□ -0.58
VPS45-204ENST00000460366 FAM133AQ8N9E0 248 aa11.45□□□□□ -0.58
VPS45-204ENST00000460366 LLPHQ9BRT6 129 aaKnown RBP11.45□□□□□ -0.58
VPS45-204ENST00000460366 GLT8D2Q9H1C3 349 aa11.45□□□□□ -0.58
VPS45-204ENST00000460366 BARHL2Q9NY43 387 aa11.45□□□□□ -0.58
VPS45-204ENST00000460366 MGAMO43451 1857 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 OPLAHO14841 1288 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 ADCY3O60266 1144 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 DEXIO95424 95 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 LARGE1O95461 756 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 CYP2B6P20813 491 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 HSD17B4P51659 736 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 RPS6P62753 249 aaKnown RBP11.44□□□□□ -0.58
VPS45-204ENST00000460366 BAATQ14032 418 aaPredicted RBP11.44□□□□□ -0.58
VPS45-204ENST00000460366 PKN1Q16512 942 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 NSMFQ6X4W1 530 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 RNF207Q6ZRF8 634 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 NOL8Q76FK4 1167 aaKnown RBP11.44□□□□□ -0.58
VPS45-204ENST00000460366 TNS4Q8IZW8 715 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 NECAB1Q8N987 351 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 NPLOC4Q8TAT6 608 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 CCDC12Q8WUD4 166 aaPredicted RBP11.44□□□□□ -0.58
VPS45-204ENST00000460366 PIBF1Q8WXW3 757 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 PHKBQ93100 1093 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 SLC26A6Q9BXS9 759 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 SH3GLB2Q9NR46 395 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 PTCH2Q9Y6C5 1203 aa11.44□□□□□ -0.58
VPS45-204ENST00000460366 hCG_1642624A0A1W2PR95 340 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 ESYT2A0FGR8 921 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 PTPDC1A2A3K4 754 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 GCOM1H8Y6P7 765 aaPredicted RBP11.43□□□□□ -0.58
VPS45-204ENST00000460366 STXBP3O00186 592 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 PIK3CDO00329 1044 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 MAP3K7O43318 606 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 CTDNEP1O95476 244 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 POLR2MP0CAP2 368 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 TAL1P17542 331 aaPredicted RBP11.43□□□□□ -0.58
VPS45-204ENST00000460366 GRK4P32298 578 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 WWC2Q6AWC2 1192 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 MAMDC4Q6UXC1 1216 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 HEATR3Q7Z4Q2 680 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 NSUN7Q8NE18 718 aaKnown RBP11.43□□□□□ -0.58
VPS45-204ENST00000460366 DNERQ8NFT8 737 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 SYTL5Q8TDW5 730 aaPredicted RBP11.43□□□□□ -0.58
VPS45-204ENST00000460366 WASF1Q92558 559 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 SNX21Q969T3 373 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 KCTD12Q96CX2 325 aaKnown RBP11.43□□□□□ -0.58
VPS45-204ENST00000460366 TMX3Q96JJ7 454 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 MCOLN1Q9GZU1 580 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 PSTPIP2Q9H939 334 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 ADD3Q9UEY8 706 aaKnown RBP11.43□□□□□ -0.58
VPS45-204ENST00000460366 NRBP1Q9UHY1 535 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 ZNF236Q9UL36 1845 aa11.43□□□□□ -0.58
VPS45-204ENST00000460366 SYNGAP1Q96PV0 1343 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms