RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 TOMM20Q15388 145 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 TAF11Q15544 211 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 C21orf62-AS1Q17RA5 79 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 FAM133BQ5BKY9 247 aaKnown RBP4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 DACT2Q5SW24 774 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 GJC2Q5T442 439 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 ARMC3Q5W041 872 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 LVRNQ6Q4G3 990 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 KIAA1958Q8N8K9 716 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 RIN3Q8TB24 985 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 PIWIL2Q8TC59 973 aaKnown RBP4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 FRS2Q8WU20 508 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 CPLX3Q8WVH0 158 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 NINJ1Q92982 152 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 ANAPC16Q96DE5 110 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 EAF1Q96JC9 268 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 ALPK1Q96QP1 1244 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 STRBPQ96SI9 672 aaKnown RBP4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 MYCBPQ99417 103 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 SARGQ9BW04 601 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 KBTBD4Q9NVX7 518 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 OBP2AQ9NY56 170 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 TJP2Q9UDY2 1190 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 ABCF2Q9UG63 623 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 ADAM30Q9UKF2 790 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 NOB1Q9ULX3 412 aaKnown RBP4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 PCDHB5Q9Y5E4 795 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 hCG_1984214I3L0E3 225 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 DIAPH1O60610 1272 aaKnown RBP4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 RFPL1O75677 317 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 NBPF7P0C2Y1 421 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 RLBP1P12271 317 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 SERPINB3P29508 390 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 ATICP31939 592 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 DEKP35659 375 aaKnown RBP4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 ETV3P41162 512 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 CLK1P49759 484 aaKnown RBP4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 EIF5P55010 431 aaKnown RBP4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 CASP7P55210 303 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 PDE4BQ07343 736 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 TNK2Q07912 1038 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 MLANAQ16655 118 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 DDR2Q16832 855 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 TNNI3KQ59H18 835 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 CT47A1Q5JQC4 288 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 CDKAL1Q5VV42 579 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 ERICH6BQ5W0A0 696 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 LARP1BQ659C4 914 aaKnown RBP4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 SLC6A19Q695T7 634 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 MZT2AQ6P582 158 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 C16orf54Q6UWD8 224 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 TOGARAM2Q6ZUX3 1019 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 TMPRSS7Q7RTY8 843 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 RNF180Q86T96 592 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 PASD1Q8IV76 773 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 NIM1KQ8IY84 436 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 UBR7Q8N806 425 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 HOOK2Q96ED9 719 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 LIN37Q96GY3 246 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 TMEM87BQ96K49 555 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 RSRP1Q9BUV0 290 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 NOC4LQ9BVI4 516 aaKnown RBP4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 CSRNP2Q9H175 543 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 MIR1-1HGQ9H1L0 117 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 ST7Q9NRC1 585 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 ISY1Q9ULR0 285 aaKnown RBP4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 PTCH2Q9Y6C5 1203 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 PHLDB1Q86UU1 1377 aa4.76□□□□□ -1.65
HMGB3P30-201ENST00000457863 WASHC2AQ641Q2 1341 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 ANO9A1A5B4 782 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 RASSF10A6NK89 507 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 PGRP06401 933 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 MMP14P50281 582 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 RPL6Q02878 288 aaKnown RBP4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 DDX10Q13206 875 aaKnown RBP4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 KRT72Q14CN4 511 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 WDR45BQ5MNZ6 344 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 TSHZ3Q63HK5 1081 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 RASSF3Q86WH2 238 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 CHCHD4Q8N4Q1 142 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 AFAP1L2Q8N4X5 818 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 VPS37AQ8NEZ2 397 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 DNAJB8Q8NHS0 232 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 PGBD4Q96DM1 585 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 SCLT1Q96NL6 688 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 ELAC2Q9BQ52 826 aaKnown RBP4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 SEZ6LQ9BYH1 1024 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 ODF2LQ9ULJ1 636 aa4.75□□□□□ -1.65
HMGB3P30-201ENST00000457863 KDM2BQ8NHM5 1336 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 PABPN1LA6NDY0 278 aaKnown RBP4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 PDE8AO60658 829 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 EYA4O95677 639 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 CBX7O95931 251 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 IGHDP01880 384 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 TFE3P19532 575 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 ZNF280AP59817 542 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 FBLN7Q53RD9 439 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 TMEM67Q5HYA8 995 aa4.74□□□□□ -1.65
HMGB3P30-201ENST00000457863 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms