RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 FMNL3Q8IVF7 1028 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 ZSCAN29Q8IWY8 852 aaPredicted RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 CCDC65Q8IXS2 484 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 TEX11Q8IYF3 940 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 MYOCDQ8IZQ8 938 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 GUF1Q8N442 669 aaKnown RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 RNF10Q8N5U6 811 aaKnown RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 ARFGAP2Q8N6H7 521 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 C4orf32Q8N8J7 132 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 ERMNQ8TAM6 284 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 RASGRP4Q8TDF6 673 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 SNX29Q8TEQ0 813 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 LMBR1Q8WVP7 490 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 BBXQ8WY36 941 aaPredicted RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 LARP4BQ92615 738 aaKnown RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 SYN2Q92777 582 aaPredicted RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 CEP63Q96MT8 703 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 PURBQ96QR8 312 aaKnown RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 SETDB2Q96T68 719 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 MMS19Q96T76 1030 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 EYA3Q99504 573 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 PLIN2Q99541 437 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 CHP1Q99653 195 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 CAPS2Q9BXY5 557 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 TRIM34Q9BYJ4 488 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 TTYH3Q9C0H2 523 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 ZMYND12Q9H0C1 365 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 NT5C3AQ9H0P0 336 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 NDST4Q9H3R1 872 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 MMRN2Q9H8L6 949 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 CEP72Q9P209 647 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 STIM2Q9P246 746 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 MAD2L2Q9UI95 211 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 STX8Q9UNK0 236 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 MTMR7Q9Y216 660 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 LEMD3Q9Y2U8 911 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 REXO2Q9Y3B8 237 aaKnown RBP3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 PCDHA13Q9Y5I0 950 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 SLIT2O94813 1529 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 FAM205AQ6ZU69 1335 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 CNTNAP4Q9C0A0 1308 aa3.69□□□□□ -1.82
HMGN1P18-201ENST00000457642 TNRC6CQ9HCJ0 1690 aaKnown RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 COL5A3P25940 1745 aaPredicted RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 A0A0U1RQJ8 604 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 PALM3A6NDB9 673 aaPredicted RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 PP2D1A8MPX8 630 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 KLRF2D3W0D1 207 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 M0R2N6 131 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 CES2O00748 559 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 WNT7AO00755 349 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 PJA2O43164 708 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 PPP1R12BO60237 982 aaPredicted RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 SHOX2O60902 331 aaPredicted RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 SRGAP2O75044 1071 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 N4BP1O75113 896 aaKnown RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 MOCS3O95396 460 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 LCA5LO95447 670 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 SERPING1P05155 500 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 KRT18P05783 430 aaKnown RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 USP17L8P0C7I0 530 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 CYP2D6P10635 497 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 EPB41P11171 864 aaKnown RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 GGCXP38435 758 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 EIF4A3P38919 411 aaKnown RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 TECP42680 631 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 TXKP42681 527 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 FXR2P51116 673 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 MRPL12P52815 198 aaKnown RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 CORO7P57737 925 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 PPP4CP60510 307 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 GNGT1P63211 74 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 CYP27A1Q02318 531 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 MAPK8IP2Q13387 824 aaPredicted RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 MTMR3Q13615 1198 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 PDIA5Q14554 519 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 CLUL1Q15846 466 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 ASIC2Q16515 512 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 TXNRD1Q16881 649 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 NAALADL2Q58DX5 795 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 C10orf76Q5T2E6 689 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 HAUS3Q68CZ6 603 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 MCTP2Q6DN12 878 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 CENPPQ6IPU0 288 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 RCSD1Q6JBY9 416 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 WDR59Q6PJI9 974 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 LRRC31Q6UY01 552 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 BICDL1Q6ZP65 573 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 C16orf86Q6ZW13 317 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 RRAGAQ7L523 313 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 TADA2BQ86TJ2 420 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 IRF2BP1Q8IU81 584 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 NEDD1Q8NHV4 660 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 TBCKQ8TEA7 893 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 WHAMMQ8TF30 809 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 AENQ8WTP8 325 aaKnown RBP3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 TBC1D22AQ8WUA7 517 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 TGFBRAP1Q8WUH2 860 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 ATRIPQ8WXE1 791 aa3.68□□□□□ -1.82
HMGN1P18-201ENST00000457642 RAD54LQ92698 747 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms