RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 TMEM199Q8N511 208 aa21.61■■□□□ 1.05
UBE2D4-208ENST00000454350 OR6J1Q8NGC5 347 aa21.61■■□□□ 1.05
UBE2D4-208ENST00000454350 SCFD2Q8WU76 684 aa21.61■■□□□ 1.05
UBE2D4-208ENST00000454350 ALDH8A1Q9H2A2 487 aaPredicted RBP21.61■■□□□ 1.05
UBE2D4-208ENST00000454350 SENP2Q9HC62 589 aa21.61■■□□□ 1.05
UBE2D4-208ENST00000454350 CHD9Q3L8U1 2897 aa21.61■■□□□ 1.05
UBE2D4-208ENST00000454350 TET1Q8NFU7 2136 aa21.61■■□□□ 1.05
UBE2D4-208ENST00000454350 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 PALM3A6NDB9 673 aaPredicted RBP21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 A6NJR5 290 aa21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 NKRFO15226 690 aaKnown RBP eCLIP21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 SGSM2O43147 1006 aa21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 CPT1AP50416 773 aa21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 GHRHRQ02643 423 aa21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 PPP2R5BQ15173 497 aa21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 STOX1Q6ZVD7 989 aa21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 ZNF365Q70YC5 407 aa21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 FBXO11Q86XK2 927 aa21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 WNT8AQ9H1J5 351 aa21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 HIPK3Q9H422 1215 aa21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 VAT1LQ9HCJ6 419 aa21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 POLR3EQ9NVU0 708 aa21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 TANC1Q9C0D5 1861 aa21.6■■□□□ 1.05
UBE2D4-208ENST00000454350 RUFY2Q8WXA3 655 aa21.59■■□□□ 1.05
UBE2D4-208ENST00000454350 IL23AQ9NPF7 189 aa21.59■■□□□ 1.05
UBE2D4-208ENST00000454350 TMEM265A0A087WTH1 108 aa21.58■■□□□ 1.05
UBE2D4-208ENST00000454350 KLRF2D3W0D1 207 aa21.58■■□□□ 1.05
UBE2D4-208ENST00000454350 MYL3P08590 195 aa21.58■■□□□ 1.05
UBE2D4-208ENST00000454350 TXNP10599 105 aaKnown RBP21.58■■□□□ 1.05
UBE2D4-208ENST00000454350 DNAJB2P25686 324 aa21.58■■□□□ 1.05
UBE2D4-208ENST00000454350 MPHOSPH6Q99547 160 aaKnown RBP21.58■■□□□ 1.05
UBE2D4-208ENST00000454350 MTG1Q9BT17 334 aaPredicted RBP21.58■■□□□ 1.05
UBE2D4-208ENST00000454350 TRMT13Q9NUP7 481 aaKnown RBP21.58■■□□□ 1.05
UBE2D4-208ENST00000454350 MRPL11Q9Y3B7 192 aaKnown RBP21.58■■□□□ 1.05
UBE2D4-208ENST00000454350 U3KPZ7 1027 aaPredicted RBP21.58■■□□□ 1.05
UBE2D4-208ENST00000454350 GRXCR1A8MXD5 290 aa21.57■■□□□ 1.04
UBE2D4-208ENST00000454350 E7EWF7 191 aa21.57■■□□□ 1.04
UBE2D4-208ENST00000454350 HSD17B4P51659 736 aa21.57■■□□□ 1.04
UBE2D4-208ENST00000454350 PSRC1Q6PGN9 363 aaPredicted RBP21.57■■□□□ 1.04
UBE2D4-208ENST00000454350 MCF2L2Q86YR7 1114 aa21.57■■□□□ 1.04
UBE2D4-208ENST00000454350 NSUN6Q8TEA1 469 aaKnown RBP21.57■■□□□ 1.04
UBE2D4-208ENST00000454350 PPP1R13LQ8WUF5 828 aa21.57■■□□□ 1.04
UBE2D4-208ENST00000454350 MYLIPQ8WY64 445 aa21.57■■□□□ 1.04
UBE2D4-208ENST00000454350 HERVK_113Q902F9 699 aa21.57■■□□□ 1.04
UBE2D4-208ENST00000454350 MAP4K1Q92918 833 aa21.57■■□□□ 1.04
UBE2D4-208ENST00000454350 IWS1Q96ST2 819 aa21.57■■□□□ 1.04
UBE2D4-208ENST00000454350 RMDN3Q96TC7 470 aa21.57■■□□□ 1.04
UBE2D4-208ENST00000454350 CXXC1Q9P0U4 656 aaPredicted RBP21.57■■□□□ 1.04
UBE2D4-208ENST00000454350 VCANP13611 3396 aa21.56■■□□□ 1.04
UBE2D4-208ENST00000454350 DHX16O60231 1041 aaKnown RBP21.56■■□□□ 1.04
UBE2D4-208ENST00000454350 CCL23P55773 120 aa21.56■■□□□ 1.04
UBE2D4-208ENST00000454350 ANTXR2P58335 489 aa21.56■■□□□ 1.04
UBE2D4-208ENST00000454350 ARHGAP1Q07960 439 aa21.56■■□□□ 1.04
UBE2D4-208ENST00000454350 TROAPQ12815 778 aa21.56■■□□□ 1.04
UBE2D4-208ENST00000454350 TTLL4Q14679 1199 aa21.56■■□□□ 1.04
UBE2D4-208ENST00000454350 GRM4Q14833 912 aa21.56■■□□□ 1.04
UBE2D4-208ENST00000454350 NBPF20Q3BBV1 942 aa21.56■■□□□ 1.04
UBE2D4-208ENST00000454350 AMNQ9BXJ7 453 aa21.56■■□□□ 1.04
UBE2D4-208ENST00000454350 RIOX1Q9H6W3 641 aa21.56■■□□□ 1.04
UBE2D4-208ENST00000454350 CHD7Q9P2D1 2997 aa21.55■■□□□ 1.04
UBE2D4-208ENST00000454350 B4DLN1 442 aa21.55■■□□□ 1.04
UBE2D4-208ENST00000454350 CYTH3O43739 400 aa21.55■■□□□ 1.04
UBE2D4-208ENST00000454350 CYP2C9P11712 490 aa21.55■■□□□ 1.04
UBE2D4-208ENST00000454350 PBX2P40425 430 aa21.55■■□□□ 1.04
UBE2D4-208ENST00000454350 MRPL12P52815 198 aaKnown RBP21.55■■□□□ 1.04
UBE2D4-208ENST00000454350 TRDNQ13061 729 aa21.55■■□□□ 1.04
UBE2D4-208ENST00000454350 LY6KQ17RY6 165 aa21.55■■□□□ 1.04
UBE2D4-208ENST00000454350 PBX4Q9BYU1 374 aa21.55■■□□□ 1.04
UBE2D4-208ENST00000454350 PXMP2Q9NR77 195 aa21.55■■□□□ 1.04
UBE2D4-208ENST00000454350 DOCK5Q9H7D0 1870 aa21.54■■□□□ 1.04
UBE2D4-208ENST00000454350 DLL1O00548 723 aa21.54■■□□□ 1.04
UBE2D4-208ENST00000454350 IFIT3O14879 490 aaKnown RBP21.54■■□□□ 1.04
UBE2D4-208ENST00000454350 ZBTB5O15062 677 aa21.54■■□□□ 1.04
UBE2D4-208ENST00000454350 KPNA6O60684 536 aa21.54■■□□□ 1.04
UBE2D4-208ENST00000454350 COL9A3Q14050 684 aaPredicted RBP21.54■■□□□ 1.04
UBE2D4-208ENST00000454350 GRIN2CQ14957 1233 aa21.54■■□□□ 1.04
UBE2D4-208ENST00000454350 NFRKBQ6P4R8 1299 aa21.54■■□□□ 1.04
UBE2D4-208ENST00000454350 SEPT14Q6ZU15 432 aa21.54■■□□□ 1.04
UBE2D4-208ENST00000454350 CHST3Q7LGC8 479 aa21.54■■□□□ 1.04
UBE2D4-208ENST00000454350 MB21D2Q8IYB1 491 aaPredicted RBP21.54■■□□□ 1.04
UBE2D4-208ENST00000454350 IGDCC4Q8TDY8 1250 aa21.54■■□□□ 1.04
UBE2D4-208ENST00000454350 SCLYQ96I15 445 aa21.54■■□□□ 1.04
UBE2D4-208ENST00000454350 PTPRSQ13332 1948 aa21.54■■□□□ 1.04
UBE2D4-208ENST00000454350 RGS20O76081 388 aa21.53■■□□□ 1.04
UBE2D4-208ENST00000454350 CFBP00751 764 aa21.53■■□□□ 1.04
UBE2D4-208ENST00000454350 NR3C2P08235 984 aa21.53■■□□□ 1.04
UBE2D4-208ENST00000454350 EIF2AK2P19525 551 aaKnown RBP21.53■■□□□ 1.04
UBE2D4-208ENST00000454350 STXBP2Q15833 593 aa21.53■■□□□ 1.04
UBE2D4-208ENST00000454350 NCOA7Q8NI08 942 aa21.53■■□□□ 1.04
UBE2D4-208ENST00000454350 AFG1LQ8WV93 481 aa21.53■■□□□ 1.04
UBE2D4-208ENST00000454350 CTAGE1Q96RT6 745 aa21.53■■□□□ 1.04
UBE2D4-208ENST00000454350 DDX41Q9UJV9 622 aaKnown RBP21.53■■□□□ 1.04
UBE2D4-208ENST00000454350 RBM8AQ9Y5S9 174 aaKnown RBP21.53■■□□□ 1.04
UBE2D4-208ENST00000454350 FGBP02675 491 aa21.52■■□□□ 1.04
UBE2D4-208ENST00000454350 MMP3P08254 477 aa21.52■■□□□ 1.04
UBE2D4-208ENST00000454350 SUPT20HL2P0C7V6 817 aa21.52■■□□□ 1.04
UBE2D4-208ENST00000454350 BRDTQ58F21 947 aaPredicted RBP21.52■■□□□ 1.04
UBE2D4-208ENST00000454350 ARHGEF16Q5VV41 709 aa21.52■■□□□ 1.04
UBE2D4-208ENST00000454350 KAT2BQ92831 832 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms