RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CYP2W1Q8TAV3 490 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 DDX25Q9UHL0 483 aaKnown RBP16.57■□□□□ 0.24
SF1-211ENST00000448404 LTBP1Q14766 1721 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 GH2P01242 217 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 UBXN2AP68543 259 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 PDE4CQ08493 712 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 SLFN13Q68D06 897 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 MB21D1Q8N884 522 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 CDK5RAP3Q96JB5 506 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 CNOT6LQ96LI5 555 aaKnown RBP16.57■□□□□ 0.24
SF1-211ENST00000448404 PANX2Q96RD6 677 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 CTAGE1Q96RT6 745 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 TUBGCP2Q9BSJ2 902 aa16.57■□□□□ 0.24
SF1-211ENST00000448404 COL11A2P13942 1736 aaPredicted RBP16.57■□□□□ 0.24
SF1-211ENST00000448404 ZBTB5O15062 677 aa16.56■□□□□ 0.24
SF1-211ENST00000448404 PRPHP41219 470 aa16.56■□□□□ 0.24
SF1-211ENST00000448404 SYCP1Q15431 976 aa16.56■□□□□ 0.24
SF1-211ENST00000448404 EZH2Q15910 746 aaKnown RBP16.56■□□□□ 0.24
SF1-211ENST00000448404 ZHX3Q9H4I2 956 aa16.56■□□□□ 0.24
SF1-211ENST00000448404 REXO2Q9Y3B8 237 aaKnown RBP16.56■□□□□ 0.24
SF1-211ENST00000448404 A0A1W2PRG0 241 aa16.56■□□□□ 0.24
SF1-211ENST00000448404 LRRC10BA6NIK2 292 aa16.56■□□□□ 0.24
SF1-211ENST00000448404 H0YIN7 160 aa16.56■□□□□ 0.24
SF1-211ENST00000448404 ENC1O14682 589 aa16.56■□□□□ 0.24
SF1-211ENST00000448404 PLEKP08567 350 aaPredicted RBP16.56■□□□□ 0.24
SF1-211ENST00000448404 CDC37Q16543 378 aaPredicted RBP16.56■□□□□ 0.24
SF1-211ENST00000448404 SLC35F6Q8N357 371 aa16.56■□□□□ 0.24
SF1-211ENST00000448404 TBC1D5Q92609 795 aa16.56■□□□□ 0.24
SF1-211ENST00000448404 P2RX5Q93086 422 aa16.56■□□□□ 0.24
SF1-211ENST00000448404 CALML4Q96GE6 196 aa16.56■□□□□ 0.24
SF1-211ENST00000448404 PHLPP2Q6ZVD8 1323 aa16.56■□□□□ 0.24
SF1-211ENST00000448404 POTEB3A0JP26 581 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 POTECB2RU33 542 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 KIF2AO00139 706 aaPredicted RBP16.55■□□□□ 0.24
SF1-211ENST00000448404 MTIF2P46199 727 aaKnown RBP16.55■□□□□ 0.24
SF1-211ENST00000448404 CYP27A1Q02318 531 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 ICA1Q05084 483 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 KIAA1755Q5JYT7 1200 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 POTEBQ6S5H4 581 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 HHIPL2Q6UWX4 724 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 NELFCDQ8IXH7 590 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 LARP4BQ92615 738 aaKnown RBP16.55■□□□□ 0.24
SF1-211ENST00000448404 DDX12PQ92771 950 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 SLX4Q8IY92 1834 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 H7C1D1 291 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 CLCN6P51797 869 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 ZDHHC15Q96MV8 337 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
SF1-211ENST00000448404 GUCA1BQ9UMX6 200 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 DUSP10Q9Y6W6 482 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 F5H6K3 240 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 KLRC3Q07444 240 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 WDR59Q6PJI9 974 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 SV2BQ7L1I2 683 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 MIGA2Q7L4E1 593 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 CUL5Q93034 780 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 HINFPQ9BQA5 517 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 TRIM34Q9BYJ4 488 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 RIC8AQ9NPQ8 531 aa16.55■□□□□ 0.24
SF1-211ENST00000448404 FAM207AQ9NSI2 230 aaPredicted RBP16.55■□□□□ 0.24
SF1-211ENST00000448404 TADA3O75528 432 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 TBC1D8BQ0IIM8 1120 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 KRT26Q7Z3Y9 468 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 PODNQ7Z5L7 613 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 CERS3Q8IU89 383 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 ZNF507Q8TCN5 953 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 ACER1Q8TDN7 264 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 UBXN4Q92575 508 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 TMEM51Q9NW97 253 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 HDAC6Q9UBN7 1215 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 KIAA1024Q9UPX6 916 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 LGALS16A8MUM7 142 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 VGLL3A8MV65 326 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 PPP2R3AQ06190 1150 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 KCNB1Q14721 858 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 PRR16Q569H4 304 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 FCHSD1Q86WN1 690 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 CNGA4Q8IV77 575 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 ANKRD20A12PQ8NF67 263 aa16.54■□□□□ 0.24
SF1-211ENST00000448404 SHTN1A0MZ66 631 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 POTEFA5A3E0 1075 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 RCCD1A6NED2 376 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 LAD1O00515 517 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 PPIP5K2O43314 1243 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 NDUFB10O96000 172 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 POTEIP0CG38 1075 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 TRIM21P19474 475 aaKnown RBP16.53■□□□□ 0.24
SF1-211ENST00000448404 ARHGAP25P42331 645 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 PSMC6P62333 389 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 MIIPQ5JXC2 388 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 POTEGQ6S5H5 508 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 POTEEQ6S8J3 1075 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 ZNF397Q8NF99 534 aaPredicted RBP16.53■□□□□ 0.24
SF1-211ENST00000448404 CSRNP1Q96S65 589 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 NOC4LQ9BVI4 516 aaKnown RBP16.53■□□□□ 0.24
SF1-211ENST00000448404 IKZF4Q9H2S9 585 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 MAGEC2Q9UBF1 373 aaPredicted RBP16.53■□□□□ 0.24
SF1-211ENST00000448404 CYP4A11Q02928 519 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 DGKZQ13574 1117 aa16.53■□□□□ 0.24
SF1-211ENST00000448404 STIM1Q13586 685 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms