RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 ARHGEF16Q5VV41 709 aa18.14■□□□□ 0.49
ACTB-206ENST00000443528 IQSEC1Q6DN90 963 aa18.14■□□□□ 0.49
ACTB-206ENST00000443528 GPKOWQ92917 476 aaPredicted RBP eCLIP18.14■□□□□ 0.49
ACTB-206ENST00000443528 IWS1Q96ST2 819 aa18.14■□□□□ 0.49
ACTB-206ENST00000443528 HTATIP2Q9BUP3 242 aa18.14■□□□□ 0.49
ACTB-206ENST00000443528 ALDH8A1Q9H2A2 487 aaPredicted RBP18.14■□□□□ 0.49
ACTB-206ENST00000443528 NCOA5Q9HCD5 579 aaKnown RBP18.14■□□□□ 0.49
ACTB-206ENST00000443528 GNEQ9Y223 722 aaKnown RBP18.14■□□□□ 0.49
ACTB-206ENST00000443528 MYADML2A6NDP7 307 aa18.13■□□□□ 0.49
ACTB-206ENST00000443528 B4DLN1 442 aa18.13■□□□□ 0.49
ACTB-206ENST00000443528 MEIS2O14770 477 aa18.13■□□□□ 0.49
ACTB-206ENST00000443528 MYCNP04198 464 aaPredicted RBP18.13■□□□□ 0.49
ACTB-206ENST00000443528 MRPL12P52815 198 aaKnown RBP18.13■□□□□ 0.49
ACTB-206ENST00000443528 CCT2P78371 535 aaKnown RBP18.13■□□□□ 0.49
ACTB-206ENST00000443528 WWC2Q6AWC2 1192 aa18.13■□□□□ 0.49
ACTB-206ENST00000443528 USP17L6PQ6QN14 398 aa18.13■□□□□ 0.49
ACTB-206ENST00000443528 HEATR3Q7Z4Q2 680 aa18.13■□□□□ 0.49
ACTB-206ENST00000443528 FCHSD1Q86WN1 690 aa18.13■□□□□ 0.49
ACTB-206ENST00000443528 KLHDC9Q8NEP7 349 aa18.13■□□□□ 0.49
ACTB-206ENST00000443528 ZNF274Q96GC6 653 aaPredicted RBP18.13■□□□□ 0.49
ACTB-206ENST00000443528 MPHOSPH6Q99547 160 aaKnown RBP18.13■□□□□ 0.49
ACTB-206ENST00000443528 PDCD2LQ9BRP1 358 aa18.13■□□□□ 0.49
ACTB-206ENST00000443528 UPF3AQ9H1J1 476 aaKnown RBP18.13■□□□□ 0.49
ACTB-206ENST00000443528 GTF3C3Q9Y5Q9 886 aa18.13■□□□□ 0.49
ACTB-206ENST00000443528 KBTBD13C9JR72 458 aa18.12■□□□□ 0.49
ACTB-206ENST00000443528 CTAGE5O15320 804 aa18.12■□□□□ 0.49
ACTB-206ENST00000443528 NR3C2P08235 984 aa18.12■□□□□ 0.49
ACTB-206ENST00000443528 GJA9P57773 515 aa18.12■□□□□ 0.49
ACTB-206ENST00000443528 CCSAPQ6IQ19 270 aaPredicted RBP18.12■□□□□ 0.49
ACTB-206ENST00000443528 TYW1BQ6NUM6 668 aa18.12■□□□□ 0.49
ACTB-206ENST00000443528 RNF180Q86T96 592 aa18.12■□□□□ 0.49
ACTB-206ENST00000443528 SENP6Q9GZR1 1112 aaPredicted RBP18.12■□□□□ 0.49
ACTB-206ENST00000443528 PIK3CDO00329 1044 aa18.11■□□□□ 0.49
ACTB-206ENST00000443528 CST5P28325 142 aaPredicted RBP18.11■□□□□ 0.49
ACTB-206ENST00000443528 NKX3-2P78367 333 aa18.11■□□□□ 0.49
ACTB-206ENST00000443528 PGM5Q15124 567 aa18.11■□□□□ 0.49
ACTB-206ENST00000443528 STXBP2Q15833 593 aa18.11■□□□□ 0.49
ACTB-206ENST00000443528 DUSP28Q4G0W2 176 aa18.11■□□□□ 0.49
ACTB-206ENST00000443528 NOL8Q76FK4 1167 aaKnown RBP18.11■□□□□ 0.49
ACTB-206ENST00000443528 IL31RAQ8NI17 732 aa18.11■□□□□ 0.49
ACTB-206ENST00000443528 DPF3Q92784 378 aa18.11■□□□□ 0.49
ACTB-206ENST00000443528 PHKBQ93100 1093 aa18.11■□□□□ 0.49
ACTB-206ENST00000443528 WDR11Q9BZH6 1224 aa18.11■□□□□ 0.49
ACTB-206ENST00000443528 PSTPIP2Q9H939 334 aa18.11■□□□□ 0.49
ACTB-206ENST00000443528 PHF24Q9UPV7 400 aa18.11■□□□□ 0.49
ACTB-206ENST00000443528 FRMPD4Q14CM0 1322 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 STXBP3O00186 592 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 PRPF3O43395 683 aaKnown RBP18.1■□□□□ 0.49
ACTB-206ENST00000443528 PPFIA3O75145 1194 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 ARIH2O95376 493 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 C6orf222P0C671 652 aaPredicted RBP18.1■□□□□ 0.49
ACTB-206ENST00000443528 IFNAR1P17181 557 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 AK2P54819 239 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 STK3Q13188 491 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 KCNA10Q16322 511 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 PKN1Q16512 942 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 PFKFB3Q16875 520 aaPredicted RBP18.1■□□□□ 0.49
ACTB-206ENST00000443528 LRRC26Q2I0M4 334 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 TLK2Q86UE8 772 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 VSIG10LQ86VR7 867 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 SMARCC2Q8TAQ2 1214 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 TSEN34Q9BSV6 310 aaKnown RBP18.1■□□□□ 0.49
ACTB-206ENST00000443528 BARHL2Q9NY43 387 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 TPCN1Q9ULQ1 816 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 Q9Y3F1 56 aa18.1■□□□□ 0.49
ACTB-206ENST00000443528 DNAH12Q6ZR08 3092 aa18.09■□□□□ 0.49
ACTB-206ENST00000443528 hCG_1984214I3L0E3 225 aa18.09■□□□□ 0.49
ACTB-206ENST00000443528 DYNC1LI2O43237 492 aaPredicted RBP18.09■□□□□ 0.49
ACTB-206ENST00000443528 EIF3JO75822 258 aaKnown RBP18.09■□□□□ 0.49
ACTB-206ENST00000443528 RGS20O76081 388 aa18.09■□□□□ 0.49
ACTB-206ENST00000443528 NAPAP54920 295 aa18.09■□□□□ 0.49
ACTB-206ENST00000443528 UBE2SQ16763 222 aa18.09■□□□□ 0.49
ACTB-206ENST00000443528 CCDC62Q6P9F0 684 aa18.09■□□□□ 0.49
ACTB-206ENST00000443528 ZNF713Q8N859 430 aaPredicted RBP18.09■□□□□ 0.49
ACTB-206ENST00000443528 SCFD2Q8WU76 684 aa18.09■□□□□ 0.49
ACTB-206ENST00000443528 CUL5Q93034 780 aa18.09■□□□□ 0.49
ACTB-206ENST00000443528 FERMT2Q96AC1 680 aa18.09■□□□□ 0.49
ACTB-206ENST00000443528 SPC25Q9HBM1 224 aa18.09■□□□□ 0.49
ACTB-206ENST00000443528 PDE4DIPQ5VU43 2346 aa18.08■□□□□ 0.48
ACTB-206ENST00000443528 TXNP10599 105 aaKnown RBP18.08■□□□□ 0.48
ACTB-206ENST00000443528 MYCLP12524 364 aaPredicted RBP18.08■□□□□ 0.48
ACTB-206ENST00000443528 SCG2P13521 617 aa18.08■□□□□ 0.48
ACTB-206ENST00000443528 NEK4P51957 841 aa18.08■□□□□ 0.48
ACTB-206ENST00000443528 ACLYP53396 1101 aa18.08■□□□□ 0.48
ACTB-206ENST00000443528 ATN1P54259 1190 aaPredicted RBP18.08■□□□□ 0.48
ACTB-206ENST00000443528 BEX3Q00994 111 aa18.08■□□□□ 0.48
ACTB-206ENST00000443528 PPP1R18Q6NYC8 613 aa18.08■□□□□ 0.48
ACTB-206ENST00000443528 SLC39A5Q6ZMH5 540 aa18.08■□□□□ 0.48
ACTB-206ENST00000443528 SEPT14Q6ZU15 432 aa18.08■□□□□ 0.48
ACTB-206ENST00000443528 COPS5Q92905 334 aa18.08■□□□□ 0.48
ACTB-206ENST00000443528 ZFP91Q96JP5 570 aaPredicted RBP18.08■□□□□ 0.48
ACTB-206ENST00000443528 KIF2CQ99661 725 aa18.08■□□□□ 0.48
ACTB-206ENST00000443528 RNF26Q9BY78 433 aaPredicted RBP18.08■□□□□ 0.48
ACTB-206ENST00000443528 ALPK3Q96L96 1907 aa18.08■□□□□ 0.48
ACTB-206ENST00000443528 A0A1W2PQ45 241 aaPredicted RBP18.07■□□□□ 0.48
ACTB-206ENST00000443528 A0A1W2PQY0 241 aa18.07■□□□□ 0.48
ACTB-206ENST00000443528 MOXD2PA6NHM9 499 aa18.07■□□□□ 0.48
ACTB-206ENST00000443528 EVI5O60447 810 aa18.07■□□□□ 0.48
ACTB-206ENST00000443528 ASGR1P07306 291 aa18.07■□□□□ 0.48
ACTB-206ENST00000443528 CCND2P30279 289 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms