RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ARVCFO00192 962 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 CABYRO75952 493 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 PTGS1P23219 599 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 FAAP100Q0VG06 881 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 WTAPQ15007 396 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 BRDTQ58F21 947 aaPredicted RBP10.17□□□□□ -0.78
USP6NL-203ENST00000443016 HOMER1Q86YM7 354 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 STAG2Q8N3U4 1231 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 DEFB123Q8N688 67 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 JMJD4Q9H9V9 463 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 MRPL11Q9Y3B7 192 aaKnown RBP10.17□□□□□ -0.78
USP6NL-203ENST00000443016 RBM8AQ9Y5S9 174 aaKnown RBP10.17□□□□□ -0.78
USP6NL-203ENST00000443016 TLR3O15455 904 aaKnown RBP10.17□□□□□ -0.78
USP6NL-203ENST00000443016 PPP2R5BQ15173 497 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 SEC23AQ15436 765 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 DUSP28Q4G0W2 176 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 MORC4Q8TE76 937 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 MAP4K1Q92918 833 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 POM121Q96HA1 1249 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 AMNQ9BXJ7 453 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 GPHNQ9NQX3 736 aaPredicted RBP10.17□□□□□ -0.78
USP6NL-203ENST00000443016 Q9Y3F1 56 aa10.17□□□□□ -0.78
USP6NL-203ENST00000443016 KIAA0355O15063 1070 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 CFBP00751 764 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 ITGB8P26012 769 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 SHHQ15465 462 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 TMEM67Q5HYA8 995 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 TMEM63BQ5T3F8 832 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 GPR153Q6NV75 609 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 CATIPQ7Z7H3 387 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 NSUN6Q8TEA1 469 aaKnown RBP10.16□□□□□ -0.78
USP6NL-203ENST00000443016 SCFD2Q8WU76 684 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 RMDN3Q96TC7 470 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 ANO2Q9NQ90 1003 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 CTAGE5O15320 804 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 CPT1AP50416 773 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 FPGSQ05932 587 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 ITGA7Q13683 1181 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 C9orf50Q5SZB4 431 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 OR6J1Q8NGC5 347 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 TBC1D5Q92609 795 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 MAD2L2Q9UI95 211 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 TAF6LQ9Y6J9 622 aa10.16□□□□□ -0.78
USP6NL-203ENST00000443016 UNC80Q8N2C7 3258 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 ZBTB5O15062 677 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 TXNP10599 105 aaKnown RBP10.15□□□□□ -0.78
USP6NL-203ENST00000443016 CDK7P50613 346 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 TTLL4Q14679 1199 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 ARHGEF16Q5VV41 709 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 Q7L0L9 218 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 SYTL5Q8TDW5 730 aaPredicted RBP10.15□□□□□ -0.78
USP6NL-203ENST00000443016 PPP1R12CQ9BZL4 782 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 UPF2Q9HAU5 1272 aaKnown RBP10.15□□□□□ -0.78
USP6NL-203ENST00000443016 PCDHA1Q9Y5I3 950 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 EYSQ5T1H1 3165 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 TIMP1P01033 207 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 MYL3P08590 195 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 NKX3-2P78367 333 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 TRAF1Q13077 416 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 C8orf34Q49A92 452 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 SEPT14Q6ZU15 432 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 STOX1Q6ZVD7 989 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 RNPC3Q96LT9 517 aaKnown RBP10.15□□□□□ -0.78
USP6NL-203ENST00000443016 TAAR1Q96RJ0 339 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 ESYT1Q9BSJ8 1104 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 POLR3EQ9NVU0 708 aa10.15□□□□□ -0.78
USP6NL-203ENST00000443016 PALM3A6NDB9 673 aaPredicted RBP10.14□□□□□ -0.79
USP6NL-203ENST00000443016 NKRFO15226 690 aaKnown RBP eCLIP10.14□□□□□ -0.79
USP6NL-203ENST00000443016 EIF2AK2P19525 551 aaKnown RBP10.14□□□□□ -0.79
USP6NL-203ENST00000443016 EDNRBP24530 442 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 CHMP4BP1P59074 171 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 PSMC6P62333 389 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 STXBP2Q15833 593 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 NFXL1Q6ZNB6 911 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 FAM126BQ8IXS8 530 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 PIBF1Q8WXW3 757 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 MAF1Q9H063 256 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 SENP2Q9HC62 589 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 TBX21Q9UL17 535 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 MCM5P33992 734 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 TROAPQ12815 778 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 GRM4Q14833 912 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 FAM47CQ5HY64 1035 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 MFSD5Q6N075 450 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 TMEM199Q8N511 208 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 CTCFLQ8NI51 663 aaPredicted RBP10.14□□□□□ -0.79
USP6NL-203ENST00000443016 FAM161BQ96MY7 647 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 PIGSQ96S52 555 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 IWS1Q96ST2 819 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 SEZ6LQ9BYH1 1024 aa10.14□□□□□ -0.79
USP6NL-203ENST00000443016 RBM47A0AV96 593 aaKnown RBP10.13□□□□□ -0.79
USP6NL-203ENST00000443016 PRC1O43663 620 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 REC8O95072 547 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 KIF5BP33176 963 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 MB21D2Q8IYB1 491 aaPredicted RBP10.13□□□□□ -0.79
USP6NL-203ENST00000443016 IGDCC4Q8TDY8 1250 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 LSG1Q9H089 658 aaKnown RBP10.13□□□□□ -0.79
USP6NL-203ENST00000443016 HIPK3Q9H422 1215 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 COL20A1Q9P218 1284 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 VCANP13611 3396 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms