RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 MAML2Q8IZL2 1156 aaPredicted RBP9.04□□□□□ -0.96
SSXP3-201ENST00000442971 MYOCDQ8IZQ8 938 aa9.04□□□□□ -0.96
SSXP3-201ENST00000442971 MB21D1Q8N884 522 aa9.04□□□□□ -0.96
SSXP3-201ENST00000442971 ABHD16BQ9H3Z7 469 aa9.04□□□□□ -0.96
SSXP3-201ENST00000442971 PCDHGA2Q9Y5H1 932 aa9.04□□□□□ -0.96
SSXP3-201ENST00000442971 TICRRQ7Z2Z1 1910 aa9.03□□□□□ -0.96
SSXP3-201ENST00000442971 C2CD3Q4AC94 2353 aa9.03□□□□□ -0.96
SSXP3-201ENST00000442971 MCM3APO60318 1980 aa9.03□□□□□ -0.96
SSXP3-201ENST00000442971 C1QL1O75973 258 aa9.03□□□□□ -0.96
SSXP3-201ENST00000442971 KCNK5O95279 499 aa9.03□□□□□ -0.96
SSXP3-201ENST00000442971 SLC25A27O95847 323 aa9.03□□□□□ -0.96
SSXP3-201ENST00000442971 AMHP03971 560 aa9.03□□□□□ -0.96
SSXP3-201ENST00000442971 BMPR1AP36894 532 aa9.03□□□□□ -0.96
SSXP3-201ENST00000442971 CAMK1Q14012 370 aa9.03□□□□□ -0.96
SSXP3-201ENST00000442971 CCDC57Q2TAC2 916 aa9.03□□□□□ -0.96
SSXP3-201ENST00000442971 PRR23CQ6ZRP0 262 aa9.03□□□□□ -0.96
SSXP3-201ENST00000442971 NOL8Q76FK4 1167 aaKnown RBP9.03□□□□□ -0.96
SSXP3-201ENST00000442971 RBM23Q86U06 439 aaKnown RBP9.03□□□□□ -0.96
SSXP3-201ENST00000442971 KIAA1683Q9H0B3 1180 aa9.03□□□□□ -0.96
SSXP3-201ENST00000442971 CLMPQ9H6B4 373 aa9.03□□□□□ -0.96
SSXP3-201ENST00000442971 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.03□□□□□ -0.96
SSXP3-201ENST00000442971 POTEMA6NI47 508 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 NBNO60934 754 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 LRP3O75074 770 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 DCNP07585 359 aaKnown RBP9.02□□□□□ -0.97
SSXP3-201ENST00000442971 RFX1P22670 979 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 BTDP43251 543 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 FOXO4P98177 505 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 TNFAIP2Q03169 654 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 POTEGQ6S5H5 508 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 TLK2Q86UE8 772 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 AFAP1L1Q8TED9 768 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 AP5M1Q9H0R1 490 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 S1PR5Q9H228 398 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 SEMA4GQ9NTN9 838 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 DLGAP2Q9P1A6 1054 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 PI4KBQ9UBF8 816 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 LIMD1Q9UGP4 676 aa9.02□□□□□ -0.97
SSXP3-201ENST00000442971 RALGAPA1Q6GYQ0 2036 aa9.01□□□□□ -0.97
SSXP3-201ENST00000442971 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.01□□□□□ -0.97
SSXP3-201ENST00000442971 PI4KAP2A4QPH2 592 aa9.01□□□□□ -0.97
SSXP3-201ENST00000442971 PARNO95453 639 aaKnown RBP9.01□□□□□ -0.97
SSXP3-201ENST00000442971 RHBDL3P58872 404 aa9.01□□□□□ -0.97
SSXP3-201ENST00000442971 FAM47CQ5HY64 1035 aa9.01□□□□□ -0.97
SSXP3-201ENST00000442971 KSR2Q6VAB6 950 aa9.01□□□□□ -0.97
SSXP3-201ENST00000442971 PI4KAP1Q8N8J0 262 aa9.01□□□□□ -0.97
SSXP3-201ENST00000442971 NEK1Q96PY6 1258 aa9.01□□□□□ -0.97
SSXP3-201ENST00000442971 PUS3Q9BZE2 481 aaKnown RBP9.01□□□□□ -0.97
SSXP3-201ENST00000442971 GNEQ9Y223 722 aaKnown RBP9.01□□□□□ -0.97
SSXP3-201ENST00000442971 SIPA1L1O43166 1804 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 CHL1O00533 1208 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 RIOK3O14730 519 aaKnown RBP9□□□□□ -0.97
SSXP3-201ENST00000442971 DYNC1LI2O43237 492 aaPredicted RBP9□□□□□ -0.97
SSXP3-201ENST00000442971 LILRB5O75023 590 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 TOP3BO95985 862 aaKnown RBP9□□□□□ -0.97
SSXP3-201ENST00000442971 SELPP16109 830 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 RIPPLY3P57055 190 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 RBM10P98175 930 aaKnown RBP9□□□□□ -0.97
SSXP3-201ENST00000442971 DUSP27Q5VZP5 1158 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 LRRC8DQ7L1W4 858 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 ZDHHC14Q8IZN3 488 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 CCDC155Q8N6L0 562 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 ZBTB44Q8NCP5 570 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 ATP8B4Q8TF62 1192 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 SCNM1Q9BWG6 230 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 DNAJC18Q9H819 358 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 FBXO4Q9UKT5 387 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 RWDD3Q9Y3V2 267 aa9□□□□□ -0.97
SSXP3-201ENST00000442971 GH2P01242 217 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 MCAMP43121 646 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 CCR10P46092 362 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 LIMK1P53667 647 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 CSRP2Q16527 193 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 PSAPL1Q6NUJ1 521 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 LMBR1LQ6UX01 489 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 PROSER1Q86XN7 944 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 FIBCD1Q8N539 461 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 MAGEB6Q8N7X4 407 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 VN1R2Q8NFZ6 395 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 CAGE1Q8TC20 777 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 ACER1Q8TDN7 264 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 FAM163AQ96GL9 167 aaPredicted RBP8.99□□□□□ -0.97
SSXP3-201ENST00000442971 PLEKHF1Q96S99 279 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 APOL5Q9BWW9 433 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 TANGO6Q9C0B7 1094 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 GPR108Q9NPR9 543 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 ZSCAN32Q9NX65 697 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 PLAGL2Q9UPG8 496 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 NOD1Q9Y239 953 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 SIT1Q9Y3P8 196 aa8.99□□□□□ -0.97
SSXP3-201ENST00000442971 KRBA1A5PL33 1030 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 RBAK-RBAKDNI3L0D1 243 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 FOXD2O60548 495 aaPredicted RBP8.98□□□□□ -0.97
SSXP3-201ENST00000442971 LGR5O75473 907 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 UPP2O95045 317 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 LINC00271P0C7V0 271 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 PTGS1P23219 599 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 DNAJB1P25685 340 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 PLCD1P51178 756 aa8.98□□□□□ -0.97
SSXP3-201ENST00000442971 PLCB2Q00722 1185 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms