RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 FIBPO43427 364 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 PLEKHA8P1O95397 391 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 YEATS4O95619 227 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 MMP1P03956 469 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 SCG2P13521 617 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 AKR1B1P15121 316 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 GMPSP49915 693 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 CACNB3P54284 484 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 GDF10P55107 478 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 GUCY1B3Q02153 619 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 KIF23Q02241 960 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 TRAF1Q13077 416 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 SF3A1Q15459 793 aaKnown RBP4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 PFKFB3Q16875 520 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 ABCB5Q2M3G0 1257 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 GPATCH4Q5T3I0 446 aaKnown RBP4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 TMEM164Q5U3C3 297 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 TMEM179Q6ZVK1 233 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 NOSTRINQ8IVI9 506 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 ZFPM1Q8IX07 1006 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 GPC2Q8N158 579 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 SRBD1Q8N5C6 995 aaKnown RBP4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 ZNF713Q8N859 430 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 JMYQ8N9B5 988 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 CCDC148Q8NFR7 591 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 NLGN2Q8NFZ4 835 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 LEO1Q8WVC0 666 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 RRP36Q96EU6 259 aaKnown RBP4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 CEP95Q96GE4 821 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 FHDC1Q9C0D6 1143 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 VEZTQ9HBM0 779 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 GINM1Q9NU53 330 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 ZNF358Q9NW07 568 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 RTEL1Q9NZ71 1219 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 NYAP2Q9P242 653 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 CLIP2Q9UDT6 1046 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 SEC63Q9UGP8 760 aaKnown RBP4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 MAD2L2Q9UI95 211 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 CNOT7Q9UIV1 285 aaKnown RBP4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 CEP131Q9UPN4 1083 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 SIPA1L1O43166 1804 aa4.56□□□□□ -1.68
HMGB1P37-201ENST00000439613 CNTNAP5Q8WYK1 1306 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 CLRN2A0PK11 232 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 TMEM229AB2RXF0 380 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 TCP10L2B9ZVM9 353 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 WNT10BO00744 389 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 DTNBO60941 627 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 DKK1O94907 266 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 ATG7O95352 703 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 BMP15O95972 392 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 IL2RAP01589 272 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 SNHG28P0DPA3 235 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 KRT2P35908 639 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 ME1P48163 572 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 TRAPPC10P48553 1259 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 MAP3K10Q02779 954 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 RASSF7Q02833 373 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 CLN3Q13286 438 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 STK38Q15208 465 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 PKN1Q16512 942 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 RILPL1Q5EBL4 403 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 ANO1Q5XXA6 986 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 CAVIN1Q6NZI2 390 aaKnown RBP4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 APOBEC3FQ8IUX4 373 aaKnown RBP4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 ANKMY2Q8IV38 441 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 TEX2Q8IWB9 1127 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 DIS3L2Q8IYB7 885 aaKnown RBP4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 CMTR1Q8N1G2 835 aaKnown RBP4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 TSEN2Q8NCE0 465 aaKnown RBP4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 GMCL1P1Q8NEA9 526 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 FAM200AQ8TCP9 573 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 BICD2Q8TD16 824 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 GPT2Q8TD30 523 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 KCNG4Q8TDN1 519 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 DCAF4Q8WV16 495 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 AIFM3Q96NN9 605 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 INSM2Q96T92 566 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 PHF20Q9BVI0 1012 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 GZF1Q9H116 711 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 GLT8D2Q9H1C3 349 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 SH2D4AQ9H788 454 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 GMPR2Q9P2T1 348 aaKnown RBP4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 NOL7Q9UMY1 257 aaKnown RBP4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 PCDHAC2Q9Y5I4 1007 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 GJA3Q9Y6H8 435 aa4.55□□□□□ -1.68
HMGB1P37-201ENST00000439613 CNTNAP1P78357 1384 aa4.54□□□□□ -1.68
HMGB1P37-201ENST00000439613 GOLGB1Q14789 3259 aaKnown RBP4.54□□□□□ -1.68
HMGB1P37-201ENST00000439613 PNMA6FA0A0J9YX94 578 aa4.54□□□□□ -1.68
HMGB1P37-201ENST00000439613 A0A1W2PQ27 194 aa4.54□□□□□ -1.68
HMGB1P37-201ENST00000439613 A0A1W2PQ64 194 aa4.54□□□□□ -1.68
HMGB1P37-201ENST00000439613 A0A1W2PQD8 194 aa4.54□□□□□ -1.68
HMGB1P37-201ENST00000439613 GOLGA6L3A6NEY3 463 aa4.54□□□□□ -1.68
HMGB1P37-201ENST00000439613 TRIM75PA6NK02 468 aa4.54□□□□□ -1.68
HMGB1P37-201ENST00000439613 TTLL8A6PVC2 850 aa4.54□□□□□ -1.68
HMGB1P37-201ENST00000439613 BTBD18B2RXH4 712 aa4.54□□□□□ -1.68
HMGB1P37-201ENST00000439613 BACH1O14867 736 aa4.54□□□□□ -1.68
HMGB1P37-201ENST00000439613 SPTLC2O15270 562 aa4.54□□□□□ -1.68
HMGB1P37-201ENST00000439613 CTAGE5O15320 804 aa4.54□□□□□ -1.68
HMGB1P37-201ENST00000439613 PPFIA3O75145 1194 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms