RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 SYNPO2Q9UMS6 1093 aa11.79□□□□□ -0.52
NOD1-206ENST00000434755 EXOC7Q9UPT5 735 aa11.79□□□□□ -0.52
NOD1-206ENST00000434755 NOD1Q9Y239 953 aa11.79□□□□□ -0.52
NOD1-206ENST00000434755 GMPSP49915 693 aaPredicted RBP11.78□□□□□ -0.52
NOD1-206ENST00000434755 CEP95Q96GE4 821 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 RIOK1Q9BRS2 568 aaKnown RBP11.78□□□□□ -0.52
NOD1-206ENST00000434755 TACC1O75410 805 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 ANTXR2P58335 489 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 SLC17A8Q8NDX2 589 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 SYMPKQ92797 1274 aaKnown RBP11.78□□□□□ -0.52
NOD1-206ENST00000434755 WRNIP1Q96S55 665 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 TSPYL1Q9H0U9 437 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 CSRNP2Q9H175 543 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 SPC25Q9HBM1 224 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 PLCH1Q4KWH8 1693 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 AK9Q5TCS8 1911 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 CTAGE9A4FU28 777 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 PRPHP41219 470 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 RASA3Q14644 834 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 PRPF38AQ8NAV1 312 aaKnown RBP11.78□□□□□ -0.52
NOD1-206ENST00000434755 SLF1Q9BQI6 1058 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 MTMR4Q9NYA4 1195 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 TAB2Q9NYJ8 693 aa11.78□□□□□ -0.52
NOD1-206ENST00000434755 WDR46O15213 610 aaKnown RBP11.77□□□□□ -0.52
NOD1-206ENST00000434755 CALUO43852 315 aaPredicted RBP11.77□□□□□ -0.52
NOD1-206ENST00000434755 EEF1GP26641 437 aaKnown RBP11.77□□□□□ -0.52
NOD1-206ENST00000434755 SNAP25P60880 206 aa11.77□□□□□ -0.52
NOD1-206ENST00000434755 PPP2R3AQ06190 1150 aa11.77□□□□□ -0.52
NOD1-206ENST00000434755 BMS1Q14692 1282 aaKnown RBP11.77□□□□□ -0.52
NOD1-206ENST00000434755 CDC37Q16543 378 aaPredicted RBP11.77□□□□□ -0.52
NOD1-206ENST00000434755 TKFCQ3LXA3 575 aa11.77□□□□□ -0.52
NOD1-206ENST00000434755 C3orf67Q6ZVT6 689 aa11.77□□□□□ -0.52
NOD1-206ENST00000434755 NELFBQ8WX92 580 aa11.77□□□□□ -0.52
NOD1-206ENST00000434755 TEKT3Q9BXF9 490 aa11.77□□□□□ -0.52
NOD1-206ENST00000434755 ADARB2Q9NS39 739 aaKnown RBP11.77□□□□□ -0.52
NOD1-206ENST00000434755 COL18A1P39060 1754 aa11.77□□□□□ -0.52
NOD1-206ENST00000434755 TMEM110-MUSTN1A8MSY1 372 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 DNM2P50570 870 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 KIF5AQ12840 1032 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 PTF1AQ7RTS3 328 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 NCAPG2Q86XI2 1143 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 LMBR1Q8WVP7 490 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 IFT74Q96LB3 600 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 FNBP1Q96RU3 617 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 RGPD2P0DJD1 1756 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 CETN3O15182 167 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 CTNND1O60716 968 aaKnown RBP11.77□□□□□ -0.53
NOD1-206ENST00000434755 LRRC8AQ8IWT6 810 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 C17orf53Q8N3J3 647 aaPredicted RBP11.77□□□□□ -0.53
NOD1-206ENST00000434755 RETREG2Q8NC44 543 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 PIGSQ96S52 555 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 SPEF2Q9C093 1822 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 STX10O60499 249 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 RPN1P04843 607 aaKnown RBP11.77□□□□□ -0.53
NOD1-206ENST00000434755 CDC27P30260 824 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 CDAN1Q8IWY9 1227 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 SAMD3Q8N6K7 520 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 JPH2Q9BR39 696 aaPredicted RBP11.77□□□□□ -0.53
NOD1-206ENST00000434755 RTFDC1Q9BY42 306 aaPredicted RBP11.77□□□□□ -0.53
NOD1-206ENST00000434755 CWC15Q9P013 229 aaKnown RBP11.77□□□□□ -0.53
NOD1-206ENST00000434755 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
NOD1-206ENST00000434755 F5H6K3 240 aa11.76□□□□□ -0.53
NOD1-206ENST00000434755 NMT2O60551 498 aa11.76□□□□□ -0.53
NOD1-206ENST00000434755 COBLO75128 1261 aa11.76□□□□□ -0.53
NOD1-206ENST00000434755 GCNT3O95395 438 aa11.76□□□□□ -0.53
NOD1-206ENST00000434755 EEF2P13639 858 aaKnown RBP11.76□□□□□ -0.53
NOD1-206ENST00000434755 KLRC3Q07444 240 aa11.76□□□□□ -0.53
NOD1-206ENST00000434755 PSMD2Q13200 908 aa11.76□□□□□ -0.53
NOD1-206ENST00000434755 IDI2Q9BXS1 227 aa11.76□□□□□ -0.53
NOD1-206ENST00000434755 DDX25Q9UHL0 483 aaKnown RBP11.76□□□□□ -0.53
NOD1-206ENST00000434755 FRMD4BQ9Y2L6 1034 aa11.76□□□□□ -0.53
NOD1-206ENST00000434755 SPDYE2BA6NHP3 402 aa11.76□□□□□ -0.53
NOD1-206ENST00000434755 SPDYE6P0CI01 402 aa11.76□□□□□ -0.53
NOD1-206ENST00000434755 EPB41L4AQ9HCS5 686 aaPredicted RBP11.76□□□□□ -0.53
NOD1-206ENST00000434755 BCCIPQ9P287 314 aaKnown RBP eCLIP11.76□□□□□ -0.53
NOD1-206ENST00000434755 LAMB4A4D0S4 1761 aa11.76□□□□□ -0.53
NOD1-206ENST00000434755 H0YHG0 523 aa11.76□□□□□ -0.53
NOD1-206ENST00000434755 SETQ01105 290 aaPredicted RBP11.76□□□□□ -0.53
NOD1-206ENST00000434755 ZNF658Q5TYW1 1059 aaPredicted RBP11.76□□□□□ -0.53
NOD1-206ENST00000434755 PLA2G4DQ86XP0 818 aa11.76□□□□□ -0.53
NOD1-206ENST00000434755 MRPL44Q9H9J2 332 aaKnown RBP11.76□□□□□ -0.53
NOD1-206ENST00000434755 SCAF8Q9UPN6 1271 aaKnown RBP11.76□□□□□ -0.53
NOD1-206ENST00000434755 CCDC66A2RUB6 948 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 EEPD1Q7L9B9 569 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 GAKO14976 1311 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 TCRBV5S4A2TA0A5A2 114 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 USP17L15C9J2P7 530 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 USP17L13C9JLJ4 530 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 USP17L11C9JVI0 530 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 USP17L18D6R9N7 530 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 USP17L22D6RA61 530 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 USP17L17D6RBQ6 530 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 USP17L19D6RCP7 530 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 USP17L20D6RJB6 530 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 USP17L24Q0WX57 530 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 SUGCTQ9HAC7 445 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 RIC8AQ9NPQ8 531 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 RWDD2AQ9UIY3 292 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 CTAGE15A4D2H0 777 aa11.75□□□□□ -0.53
NOD1-206ENST00000434755 EXOC3O60645 756 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms