RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 AFF2P51816 1311 aa11.63□□□□□ -0.55
CD44-210ENST00000434472 EIF3CLB5ME19 914 aaKnown RBP11.63□□□□□ -0.55
CD44-210ENST00000434472 PSMD14O00487 310 aa11.63□□□□□ -0.55
CD44-210ENST00000434472 NPR1P16066 1061 aa11.63□□□□□ -0.55
CD44-210ENST00000434472 TRIM21P19474 475 aaKnown RBP11.63□□□□□ -0.55
CD44-210ENST00000434472 ALDH1B1P30837 517 aa11.63□□□□□ -0.55
CD44-210ENST00000434472 LRRC63Q05C16 580 aa11.63□□□□□ -0.55
CD44-210ENST00000434472 TERF2Q15554 542 aa11.63□□□□□ -0.55
CD44-210ENST00000434472 TMEM119Q4V9L6 283 aa11.63□□□□□ -0.55
CD44-210ENST00000434472 LRRC47Q8N1G4 583 aaKnown RBP11.63□□□□□ -0.55
CD44-210ENST00000434472 MSANTD4Q8NCY6 345 aa11.63□□□□□ -0.55
CD44-210ENST00000434472 HNRNPLLQ8WVV9 542 aaKnown RBP11.63□□□□□ -0.55
CD44-210ENST00000434472 PCMTD1Q96MG8 357 aaPredicted RBP11.63□□□□□ -0.55
CD44-210ENST00000434472 EIF3CQ99613 913 aaKnown RBP11.63□□□□□ -0.55
CD44-210ENST00000434472 TSG101Q99816 390 aa11.63□□□□□ -0.55
CD44-210ENST00000434472 TTYH3Q9C0H2 523 aa11.63□□□□□ -0.55
CD44-210ENST00000434472 JMJD4Q9H9V9 463 aa11.63□□□□□ -0.55
CD44-210ENST00000434472 GPCPD1Q9NPB8 672 aa11.63□□□□□ -0.55
CD44-210ENST00000434472 BLOC1S4Q9NUP1 217 aa11.63□□□□□ -0.55
CD44-210ENST00000434472 KDM3AQ9Y4C1 1321 aa11.63□□□□□ -0.55
CD44-210ENST00000434472 G3V3G9 751 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 RIMBP2O15034 1052 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 ZBTB5O15062 677 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 KRT86O43790 486 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 MARCH6O60337 910 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 PLA2G4AP47712 749 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 TNNI2P48788 182 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 CLK2P49760 499 aaKnown RBP11.62□□□□□ -0.55
CD44-210ENST00000434472 MCM6Q14566 821 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 DCAF8Q5TAQ9 597 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 ZNF771Q7L3S4 317 aaPredicted RBP11.62□□□□□ -0.55
CD44-210ENST00000434472 ADGRF4Q8IZF3 695 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 SNX29Q8TEQ0 813 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 TEKT1Q969V4 418 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 CHP1Q99653 195 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 TSGA10Q9BZW7 698 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 NT5C3AQ9H0P0 336 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 MYO6Q9UM54 1294 aa11.62□□□□□ -0.55
CD44-210ENST00000434472 MYMKA6NI61 221 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 TDP2O95551 362 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 FCER1AP12319 257 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 SHMT1P34896 483 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 FKBP1AP62942 108 aaKnown RBP11.61□□□□□ -0.55
CD44-210ENST00000434472 MAN2A1Q16706 1144 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 CCDC96Q2M329 555 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 MIIPQ5JXC2 388 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 CDC42EP5Q6NZY7 148 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 WDR59Q6PJI9 974 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 ARHGAP27Q6ZUM4 889 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 KIAA1328Q86T90 577 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 CCDC84Q86UT8 332 aaPredicted RBP11.61□□□□□ -0.55
CD44-210ENST00000434472 NLGN1Q8N2Q7 840 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 MSL3Q8N5Y2 521 aaKnown RBP11.61□□□□□ -0.55
CD44-210ENST00000434472 KIAA0895Q8NCT3 520 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 DCAF4Q8WV16 495 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 JAKMIP2Q96AA8 810 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 MTMR8Q96EF0 704 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 RPGRIP1Q96KN7 1286 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 MRIQ9BWK5 157 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 EDEM3Q9BZQ6 932 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 DHX36Q9H2U1 1008 aaKnown RBP11.61□□□□□ -0.55
CD44-210ENST00000434472 DDX4Q9NQI0 724 aaKnown RBP11.61□□□□□ -0.55
CD44-210ENST00000434472 BMP2KQ9NSY1 1161 aaPredicted RBP11.61□□□□□ -0.55
CD44-210ENST00000434472 PUF60Q9UHX1 559 aaKnown RBP11.61□□□□□ -0.55
CD44-210ENST00000434472 RAB21Q9UL25 225 aa11.61□□□□□ -0.55
CD44-210ENST00000434472 REXO2Q9Y3B8 237 aaKnown RBP11.61□□□□□ -0.55
CD44-210ENST00000434472 A0A0U1RQJ8 604 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 SLC37A4O43826 429 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 TBC1D8O95759 1140 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 MCM3P25205 808 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 HNRNPH3P31942 346 aaKnown RBP11.6□□□□□ -0.55
CD44-210ENST00000434472 PDE6BP35913 854 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 HERVK_113P62684 666 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 AMPD2Q01433 879 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 CKAP4Q07065 602 aaKnown RBP11.6□□□□□ -0.55
CD44-210ENST00000434472 GPS2Q13227 327 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 VWA3BQ502W6 1294 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 HYIQ5T013 277 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 CCDC122Q5T0U0 273 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 PROM2Q8N271 834 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 TXLNBQ8N3L3 684 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 CERS5Q8N5B7 392 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 ATRIPQ8WXE1 791 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 SEMA6BQ9H3T3 888 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 SLC39A2Q9NP94 309 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 DDX25Q9UHL0 483 aaKnown RBP11.6□□□□□ -0.55
CD44-210ENST00000434472 GUCA1BQ9UMX6 200 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 STK24Q9Y6E0 443 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 ANO9A1A5B4 782 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 F8W031 263 aaPredicted RBP11.6□□□□□ -0.55
CD44-210ENST00000434472 MPHOSPH10O00566 681 aaKnown RBP11.6□□□□□ -0.55
CD44-210ENST00000434472 SEC31AO94979 1220 aaKnown RBP11.6□□□□□ -0.55
CD44-210ENST00000434472 PAPD7Q5XG87 772 aaKnown RBP11.6□□□□□ -0.55
CD44-210ENST00000434472 MOXD1Q6UVY6 613 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 MKL1Q969V6 931 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 UBXN6Q9BZV1 441 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 NDST4Q9H3R1 872 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 PSTPIP2Q9H939 334 aa11.6□□□□□ -0.55
CD44-210ENST00000434472 NHEJ1Q9H9Q4 299 aaPredicted RBP11.6□□□□□ -0.55
CD44-210ENST00000434472 NYAP2Q9P242 653 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms