RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 SNAI1O95863 264 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 CASTP20810 708 aaKnown RBP6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 APOBRQ0VD83 1088 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 KRT32Q14532 448 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 TKFCQ3LXA3 575 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 MAP3K21Q5TCX8 1036 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 OLFML2BQ68BL8 750 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 BLOC1S2Q6QNY1 142 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 RNF207Q6ZRF8 634 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 FBXO11Q86XK2 927 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 FANCBQ8NB91 859 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 CLEC4DQ8WXI8 215 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 DPF3Q92784 378 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 KCNB2Q92953 911 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 SHISA4Q96DD7 197 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 PAWRQ96IZ0 340 aaKnown RBP6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 AMNQ9BXJ7 453 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 A1CFQ9NQ94 594 aaKnown RBP6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 PAK6Q9NQU5 681 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 CYP39A1Q9NYL5 469 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 ZHX1Q9UKY1 873 aaPredicted RBP6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 VPS9D1Q9Y2B5 631 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 DIS3Q9Y2L1 958 aaKnown RBP6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 PCDHA1Q9Y5I3 950 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 PCNTO95613 3336 aa6.7□□□□□ -1.34
HMGB3P24-201ENST00000433260 MCM3APO60318 1980 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 BAZ2BQ9UIF8 2168 aaKnown RBP6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 KLF18A0A0U1RQI7 1052 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 ZBTB5O15062 677 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 CYTH3O43739 400 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 PPP1R11O60927 126 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 PPFIA3O75145 1194 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 CFBP00751 764 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 HMGB1P09429 215 aaKnown RBP6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 CALM1P0DP23 149 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 CALM2P0DP24 149 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 CALM3P0DP25 149 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 CYBAP13498 195 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 PSMA5P28066 241 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 LIFRP42702 1097 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 LSM11P83369 360 aaKnown RBP eCLIP6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 SLC35G1Q2M3R5 365 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 GJC2Q5T442 439 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 LAPTM4BQ86VI4 370 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 MICU3Q86XE3 530 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 SRBD1Q8N5C6 995 aaKnown RBP6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 FAM133AQ8N9E0 248 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 DIS3LQ8TF46 1054 aaKnown RBP6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 BRF1Q92994 677 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 RRP36Q96EU6 259 aaKnown RBP6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 TAAR1Q96RJ0 339 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 MTA3Q9BTC8 594 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 RIOX1Q9H6W3 641 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 PDGFCQ9NRA1 345 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 DDX20Q9UHI6 824 aaKnown RBP6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 CNPY2Q9Y2B0 182 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 GTF3C3Q9Y5Q9 886 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 ABCB11O95342 1321 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 ZNF236Q9UL36 1845 aa6.69□□□□□ -1.34
HMGB3P24-201ENST00000433260 PNMA6FA0A0J9YX94 578 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 SMAPO00193 183 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 ZBTB43O43298 467 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 DDAH1O94760 285 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 FARP2O94887 1054 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 PGK1P00558 417 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 IGHA2P01877 340 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 ZNF865P0CJ78 1059 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 RPS6KB1P23443 525 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 HOXA13P31271 388 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 KIF5BP33176 963 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 GNAQP50148 359 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 RPS6P62753 249 aaKnown RBP6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 CCT2P78371 535 aaKnown RBP6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 ACVR2BQ13705 512 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 CCDC144BQ3MJ40 725 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 TMEM63BQ5T3F8 832 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 MAMDC4Q6UXC1 1216 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 SLC30A10Q6XR72 485 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 NOL8Q76FK4 1167 aaKnown RBP6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 RUFY3Q7L099 469 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 ARMCX2Q7L311 632 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 HOMEZQ8IX15 550 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 FERMT2Q96AC1 680 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 LENG1Q96BZ8 264 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 FGD4Q96M96 766 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 UPF3BQ9BZI7 483 aaKnown RBP6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 SENP6Q9GZR1 1112 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 PNMA2Q9UL42 364 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 FAM184BQ9ULE4 1060 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 MRPL11Q9Y3B7 192 aaKnown RBP6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 CYP46A1Q9Y6A2 500 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 V9GY48 417 aaPredicted RBP6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 PFASO15067 1338 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 LCTP09848 1927 aa6.68□□□□□ -1.34
HMGB3P24-201ENST00000433260 FRMPD3Q5JV73 1810 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 POTEB3A0JP26 581 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 ASB14A6NK59 587 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms