RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 LTBRP36941 435 aa12.17□□□□□ -0.46
HOXD3-203ENST00000432796 VCPP55072 806 aaKnown RBP12.17□□□□□ -0.46
HOXD3-203ENST00000432796 ZXDAP98168 799 aa12.17□□□□□ -0.46
HOXD3-203ENST00000432796 NBPF20Q3BBV1 942 aa12.17□□□□□ -0.46
HOXD3-203ENST00000432796 PPP4R3BQ5MIZ7 849 aa12.17□□□□□ -0.46
HOXD3-203ENST00000432796 TMEM63BQ5T3F8 832 aa12.17□□□□□ -0.46
HOXD3-203ENST00000432796 C12orf60Q5U649 245 aa12.17□□□□□ -0.46
HOXD3-203ENST00000432796 TAPT1Q6NXT6 567 aa12.17□□□□□ -0.46
HOXD3-203ENST00000432796 NFRKBQ6P4R8 1299 aa12.17□□□□□ -0.46
HOXD3-203ENST00000432796 GIMAP6Q6P9H5 292 aa12.17□□□□□ -0.46
HOXD3-203ENST00000432796 C16orf86Q6ZW13 317 aa12.17□□□□□ -0.46
HOXD3-203ENST00000432796 SAMD11Q96NU1 681 aa12.17□□□□□ -0.46
HOXD3-203ENST00000432796 NUP88Q99567 741 aaPredicted RBP12.17□□□□□ -0.46
HOXD3-203ENST00000432796 MTG1Q9BT17 334 aaPredicted RBP12.17□□□□□ -0.46
HOXD3-203ENST00000432796 TLR9Q9NR96 1032 aa12.17□□□□□ -0.46
HOXD3-203ENST00000432796 PDGFCQ9NRA1 345 aa12.17□□□□□ -0.46
HOXD3-203ENST00000432796 NOD1Q9Y239 953 aa12.17□□□□□ -0.46
HOXD3-203ENST00000432796 BAZ2AQ9UIF9 1905 aaKnown RBP12.17□□□□□ -0.46
HOXD3-203ENST00000432796 SCN5AQ14524 2016 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 GVINP1Q7Z2Y8 2422 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 MINDY4BA8MYZ0 360 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 STXBP3O00186 592 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 PRKAB2O43741 272 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 PARNO95453 639 aaKnown RBP12.16□□□□□ -0.46
HOXD3-203ENST00000432796 AVPR2P30518 371 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 CDK8P49336 464 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 CPT1AP50416 773 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 NUBP1P53384 320 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 OAZ1P54368 228 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 PTPN11Q06124 597 aaPredicted RBP12.16□□□□□ -0.46
HOXD3-203ENST00000432796 SMAD4Q13485 552 aaKnown RBP12.16□□□□□ -0.46
HOXD3-203ENST00000432796 GPNMBQ14956 572 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 CTC1Q2NKJ3 1217 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 DUSP28Q4G0W2 176 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 EPC2Q52LR7 807 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 RPAINQ86UA6 219 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 FBXO16Q8IX29 292 aaPredicted RBP12.16□□□□□ -0.46
HOXD3-203ENST00000432796 ZNF444Q8N0Y2 327 aaPredicted RBP12.16□□□□□ -0.46
HOXD3-203ENST00000432796 CCDC155Q8N6L0 562 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 CAGE1Q8TC20 777 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 SLC38A10Q9HBR0 1119 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 GPHNQ9NQX3 736 aaPredicted RBP12.16□□□□□ -0.46
HOXD3-203ENST00000432796 INSL6Q9Y581 213 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 TANC1Q9C0D5 1861 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 VPS13AQ96RL7 3174 aa12.16□□□□□ -0.46
HOXD3-203ENST00000432796 FAM186AA6NE01 2351 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 H3BNC9 293 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 GPAA1O43292 621 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 CXCL10P02778 98 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 MYL3P08590 195 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 NBL1P41271 181 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 PDE4BQ07343 736 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 SIGLEC14Q08ET2 396 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 ANKRD45Q5TZF3 282 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 FAM117BQ6P1L5 589 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 EEPD1Q7L9B9 569 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 PUS7LQ9H0K6 701 aaKnown RBP12.15□□□□□ -0.46
HOXD3-203ENST00000432796 NAPBQ9H115 298 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 ACAD9Q9H845 621 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 VTA1Q9NP79 307 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 A1CFQ9NQ94 594 aaKnown RBP12.15□□□□□ -0.46
HOXD3-203ENST00000432796 ISY1Q9ULR0 285 aaKnown RBP12.15□□□□□ -0.46
HOXD3-203ENST00000432796 COL4A6Q14031 1691 aa12.15□□□□□ -0.46
HOXD3-203ENST00000432796 CACNA1GO43497 2377 aa12.14□□□□□ -0.47
HOXD3-203ENST00000432796 SIP14410 1827 aa12.14□□□□□ -0.47
HOXD3-203ENST00000432796 KMT2BQ9UMN6 2715 aaPredicted RBP12.14□□□□□ -0.47
HOXD3-203ENST00000432796 MED19A0JLT2 244 aaPredicted RBP12.14□□□□□ -0.47
HOXD3-203ENST00000432796 RGS20O76081 388 aa12.14□□□□□ -0.47
HOXD3-203ENST00000432796 SELPP16109 830 aa12.14□□□□□ -0.47
HOXD3-203ENST00000432796 HTRA4P83105 476 aaPredicted RBP12.14□□□□□ -0.47
HOXD3-203ENST00000432796 DLX2Q07687 328 aaPredicted RBP12.14□□□□□ -0.47
HOXD3-203ENST00000432796 GPM6BQ13491 265 aa12.14□□□□□ -0.47
HOXD3-203ENST00000432796 CLUL1Q15846 466 aa12.14□□□□□ -0.47
HOXD3-203ENST00000432796 SBK1Q52WX2 424 aa12.14□□□□□ -0.47
HOXD3-203ENST00000432796 TSHZ3Q63HK5 1081 aa12.14□□□□□ -0.47
HOXD3-203ENST00000432796 CTR9Q6PD62 1173 aa12.14□□□□□ -0.47
HOXD3-203ENST00000432796 KIAA1211Q6ZU35 1233 aa12.14□□□□□ -0.47
HOXD3-203ENST00000432796 LRRC8DQ7L1W4 858 aa12.14□□□□□ -0.47
HOXD3-203ENST00000432796 SP7Q8TDD2 431 aaPredicted RBP12.14□□□□□ -0.47
HOXD3-203ENST00000432796 KIFC2Q96AC6 838 aa12.14□□□□□ -0.47
HOXD3-203ENST00000432796 ASIC4Q96FT7 647 aa12.14□□□□□ -0.47
HOXD3-203ENST00000432796 STRBPQ96SI9 672 aaKnown RBP12.14□□□□□ -0.47
HOXD3-203ENST00000432796 HOMER2Q9NSB8 354 aa12.14□□□□□ -0.47
HOXD3-203ENST00000432796 DDX49Q9Y6V7 483 aaKnown RBP12.14□□□□□ -0.47
HOXD3-203ENST00000432796 PTPRSQ13332 1948 aa12.13□□□□□ -0.47
HOXD3-203ENST00000432796 KMT2EQ8IZD2 1858 aa12.13□□□□□ -0.47
HOXD3-203ENST00000432796 F5H6K3 240 aa12.13□□□□□ -0.47
HOXD3-203ENST00000432796 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
HOXD3-203ENST00000432796 NBNO60934 754 aa12.13□□□□□ -0.47
HOXD3-203ENST00000432796 NDUFB10O96000 172 aa12.13□□□□□ -0.47
HOXD3-203ENST00000432796 TSPY3P0CV98 308 aa12.13□□□□□ -0.47
HOXD3-203ENST00000432796 TSPY8P0CW00 308 aa12.13□□□□□ -0.47
HOXD3-203ENST00000432796 KLRC3Q07444 240 aa12.13□□□□□ -0.47
HOXD3-203ENST00000432796 RBL2Q08999 1139 aa12.13□□□□□ -0.47
HOXD3-203ENST00000432796 IKBKEQ14164 716 aa12.13□□□□□ -0.47
HOXD3-203ENST00000432796 TCTN1Q2MV58 587 aa12.13□□□□□ -0.47
HOXD3-203ENST00000432796 PPP1R13LQ8WUF5 828 aa12.13□□□□□ -0.47
HOXD3-203ENST00000432796 RWDD1Q9H446 243 aaPredicted RBP12.13□□□□□ -0.47
HOXD3-203ENST00000432796 NCOR2Q9Y618 2525 aa12.13□□□□□ -0.47
HOXD3-203ENST00000432796 MCM3APO60318 1980 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms