RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 CPT1AP50416 773 aa20.39■□□□□ 0.85
NUP50-208ENST00000430547 FAAP100Q0VG06 881 aa20.39■□□□□ 0.85
NUP50-208ENST00000430547 TTLL4Q14679 1199 aa20.39■□□□□ 0.85
NUP50-208ENST00000430547 LRIT3Q3SXY7 679 aa20.39■□□□□ 0.85
NUP50-208ENST00000430547 TMEM63BQ5T3F8 832 aa20.39■□□□□ 0.85
NUP50-208ENST00000430547 IWS1Q96ST2 819 aa20.39■□□□□ 0.85
NUP50-208ENST00000430547 MAP3K14Q99558 947 aa20.39■□□□□ 0.85
NUP50-208ENST00000430547 MAP3K20Q9NYL2 800 aaKnown RBP20.39■□□□□ 0.85
NUP50-208ENST00000430547 PNMA6FA0A0J9YX94 578 aa20.38■□□□□ 0.85
NUP50-208ENST00000430547 SOX1O00570 391 aaPredicted RBP20.38■□□□□ 0.85
NUP50-208ENST00000430547 SH2B2O14492 632 aaPredicted RBP20.38■□□□□ 0.85
NUP50-208ENST00000430547 KIAA0355O15063 1070 aa20.38■□□□□ 0.85
NUP50-208ENST00000430547 PPP1R11O60927 126 aaPredicted RBP20.38■□□□□ 0.85
NUP50-208ENST00000430547 TXNP10599 105 aaKnown RBP20.38■□□□□ 0.85
NUP50-208ENST00000430547 STXBP2Q15833 593 aa20.38■□□□□ 0.85
NUP50-208ENST00000430547 LRCH3Q96II8 777 aa20.38■□□□□ 0.85
NUP50-208ENST00000430547 MYL10Q9BUA6 226 aa20.38■□□□□ 0.85
NUP50-208ENST00000430547 GPHNQ9NQX3 736 aaPredicted RBP20.38■□□□□ 0.85
NUP50-208ENST00000430547 POLR3EQ9NVU0 708 aa20.38■□□□□ 0.85
NUP50-208ENST00000430547 COL20A1Q9P218 1284 aa20.38■□□□□ 0.85
NUP50-208ENST00000430547 CYTH3O43739 400 aa20.37■□□□□ 0.85
NUP50-208ENST00000430547 CALM1P0DP23 149 aa20.37■□□□□ 0.85
NUP50-208ENST00000430547 CALM2P0DP24 149 aa20.37■□□□□ 0.85
NUP50-208ENST00000430547 CALM3P0DP25 149 aa20.37■□□□□ 0.85
NUP50-208ENST00000430547 EIF2AK2P19525 551 aaKnown RBP20.37■□□□□ 0.85
NUP50-208ENST00000430547 CDK7P50613 346 aa20.37■□□□□ 0.85
NUP50-208ENST00000430547 HSD17B4P51659 736 aa20.37■□□□□ 0.85
NUP50-208ENST00000430547 SAMD3Q8N6K7 520 aa20.37■□□□□ 0.85
NUP50-208ENST00000430547 PIBF1Q8WXW3 757 aa20.37■□□□□ 0.85
NUP50-208ENST00000430547 LZTS2Q9BRK4 669 aa20.37■□□□□ 0.85
NUP50-208ENST00000430547 SEZ6LQ9BYH1 1024 aa20.37■□□□□ 0.85
NUP50-208ENST00000430547 SEC63Q9UGP8 760 aaKnown RBP20.37■□□□□ 0.85
NUP50-208ENST00000430547 MYH7BA7E2Y1 1941 aa20.37■□□□□ 0.85
NUP50-208ENST00000430547 LIFRP42702 1097 aa20.36■□□□□ 0.85
NUP50-208ENST00000430547 GNAQP50148 359 aa20.36■□□□□ 0.85
NUP50-208ENST00000430547 ITGA7Q13683 1181 aa20.36■□□□□ 0.85
NUP50-208ENST00000430547 SEPT14Q6ZU15 432 aa20.36■□□□□ 0.85
NUP50-208ENST00000430547 RRP36Q96EU6 259 aaKnown RBP20.36■□□□□ 0.85
NUP50-208ENST00000430547 SPZ1Q9BXG8 430 aa20.36■□□□□ 0.85
NUP50-208ENST00000430547 PXMP2Q9NR77 195 aa20.36■□□□□ 0.85
NUP50-208ENST00000430547 SLC12A7Q9Y666 1083 aa20.36■□□□□ 0.85
NUP50-208ENST00000430547 LAMA3Q16787 3333 aa20.35■□□□□ 0.85
NUP50-208ENST00000430547 GCOM1H8Y6P7 765 aaPredicted RBP20.35■□□□□ 0.85
NUP50-208ENST00000430547 OPLAHO14841 1288 aa20.35■□□□□ 0.85
NUP50-208ENST00000430547 MYL3P08590 195 aa20.35■□□□□ 0.85
NUP50-208ENST00000430547 POLR2MP0CAP2 368 aa20.35■□□□□ 0.85
NUP50-208ENST00000430547 HOXA13P31271 388 aaPredicted RBP20.35■□□□□ 0.85
NUP50-208ENST00000430547 GHRHRQ02643 423 aa20.35■□□□□ 0.85
NUP50-208ENST00000430547 FPGSQ05932 587 aa20.35■□□□□ 0.85
NUP50-208ENST00000430547 SLC35G1Q2M3R5 365 aa20.35■□□□□ 0.85
NUP50-208ENST00000430547 SYNE3Q6ZMZ3 975 aa20.35■□□□□ 0.85
NUP50-208ENST00000430547 FAM126BQ8IXS8 530 aa20.35■□□□□ 0.85
NUP50-208ENST00000430547 NEK1Q96PY6 1258 aa20.35■□□□□ 0.85
NUP50-208ENST00000430547 LRRC2Q9BYS8 371 aa20.35■□□□□ 0.85
NUP50-208ENST00000430547 SZT2Q5T011 3432 aa20.34■□□□□ 0.85
NUP50-208ENST00000430547 EIF3JO75822 258 aaKnown RBP20.34■□□□□ 0.85
NUP50-208ENST00000430547 NR3C2P08235 984 aa20.34■□□□□ 0.85
NUP50-208ENST00000430547 SMARCA1P28370 1054 aa20.34■□□□□ 0.85
NUP50-208ENST00000430547 KRT32Q14532 448 aa20.34■□□□□ 0.85
NUP50-208ENST00000430547 COPS5Q92905 334 aa20.34■□□□□ 0.85
NUP50-208ENST00000430547 TBX21Q9UL17 535 aa20.34■□□□□ 0.85
NUP50-208ENST00000430547 KPNA6O60684 536 aa20.33■□□□□ 0.85
NUP50-208ENST00000430547 TIMP1P01033 207 aa20.33■□□□□ 0.85
NUP50-208ENST00000430547 MYCLP12524 364 aaPredicted RBP20.33■□□□□ 0.85
NUP50-208ENST00000430547 RXRAP19793 462 aa20.33■□□□□ 0.85
NUP50-208ENST00000430547 ITGB8P26012 769 aa20.33■□□□□ 0.85
NUP50-208ENST00000430547 PSMC6P62333 389 aa20.33■□□□□ 0.85
NUP50-208ENST00000430547 PURAQ00577 322 aaKnown RBP20.33■□□□□ 0.85
NUP50-208ENST00000430547 GPR153Q6NV75 609 aa20.33■□□□□ 0.85
NUP50-208ENST00000430547 MTG1Q9BT17 334 aaPredicted RBP20.33■□□□□ 0.85
NUP50-208ENST00000430547 SCN10AQ9Y5Y9 1956 aa20.32■□□□□ 0.84
NUP50-208ENST00000430547 ARIH2O95376 493 aa20.32■□□□□ 0.84
NUP50-208ENST00000430547 GH1P01241 217 aa20.32■□□□□ 0.84
NUP50-208ENST00000430547 SHHQ15465 462 aa20.32■□□□□ 0.84
NUP50-208ENST00000430547 FCHSD1Q86WN1 690 aa20.32■□□□□ 0.84
NUP50-208ENST00000430547 MICU3Q86XE3 530 aa20.32■□□□□ 0.84
NUP50-208ENST00000430547 RAB11FIP4Q86YS3 637 aa20.32■□□□□ 0.84
NUP50-208ENST00000430547 SLC43A3Q8NBI5 491 aa20.32■□□□□ 0.84
NUP50-208ENST00000430547 PDCD2LQ9BRP1 358 aa20.32■□□□□ 0.84
NUP50-208ENST00000430547 PPP1R12CQ9BZL4 782 aa20.32■□□□□ 0.84
NUP50-208ENST00000430547 MRVI1Q9Y6F6 885 aa20.32■□□□□ 0.84
NUP50-208ENST00000430547 A6NJR5 290 aa20.31■□□□□ 0.84
NUP50-208ENST00000430547 PLEKHA8P1O95397 391 aa20.31■□□□□ 0.84
NUP50-208ENST00000430547 CD4P01730 458 aa20.31■□□□□ 0.84
NUP50-208ENST00000430547 COL9A3Q14050 684 aaPredicted RBP20.31■□□□□ 0.84
NUP50-208ENST00000430547 PGM5Q15124 567 aa20.31■□□□□ 0.84
NUP50-208ENST00000430547 LY6KQ17RY6 165 aa20.31■□□□□ 0.84
NUP50-208ENST00000430547 C9orf50Q5SZB4 431 aa20.31■□□□□ 0.84
NUP50-208ENST00000430547 MFSD5Q6N075 450 aa20.31■□□□□ 0.84
NUP50-208ENST00000430547 CCDC62Q6P9F0 684 aa20.31■□□□□ 0.84
NUP50-208ENST00000430547 DHX32Q7L7V1 743 aaKnown RBP20.31■□□□□ 0.84
NUP50-208ENST00000430547 SGMS1Q86VZ5 419 aa20.31■□□□□ 0.84
NUP50-208ENST00000430547 TMEM199Q8N511 208 aa20.31■□□□□ 0.84
NUP50-208ENST00000430547 CUL5Q93034 780 aa20.31■□□□□ 0.84
NUP50-208ENST00000430547 GRIN2DO15399 1336 aa20.3■□□□□ 0.84
NUP50-208ENST00000430547 HMGB1P09429 215 aaKnown RBP20.3■□□□□ 0.84
NUP50-208ENST00000430547 CCND2P30279 289 aa20.3■□□□□ 0.84
NUP50-208ENST00000430547 FGD1P98174 961 aa20.3■□□□□ 0.84
NUP50-208ENST00000430547 PPIGQ13427 754 aaKnown RBP eCLIP20.3■□□□□ 0.84
NUP50-208ENST00000430547 TSGA10IPQ3SY00 556 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms