RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 SKAP1Q86WV1 359 aa19.97■□□□□ 0.79
CPSF4-203ENST00000430038 OR6J1Q8NGC5 347 aa19.97■□□□□ 0.79
CPSF4-203ENST00000430038 MTMR8Q96EF0 704 aa19.97■□□□□ 0.79
CPSF4-203ENST00000430038 NOC4LQ9BVI4 516 aaKnown RBP19.97■□□□□ 0.79
CPSF4-203ENST00000430038 CNNM2Q9H8M5 875 aa19.97■□□□□ 0.79
CPSF4-203ENST00000430038 TRMT13Q9NUP7 481 aaKnown RBP19.97■□□□□ 0.79
CPSF4-203ENST00000430038 CXXC1Q9P0U4 656 aaPredicted RBP19.97■□□□□ 0.79
CPSF4-203ENST00000430038 VCANP13611 3396 aa19.97■□□□□ 0.79
CPSF4-203ENST00000430038 TET1Q8NFU7 2136 aa19.96■□□□□ 0.79
CPSF4-203ENST00000430038 PALM3A6NDB9 673 aaPredicted RBP19.96■□□□□ 0.79
CPSF4-203ENST00000430038 TLR3O15455 904 aaKnown RBP19.96■□□□□ 0.79
CPSF4-203ENST00000430038 SGSM2O43147 1006 aa19.96■□□□□ 0.79
CPSF4-203ENST00000430038 MYL3P08590 195 aa19.96■□□□□ 0.79
CPSF4-203ENST00000430038 ANTXR2P58335 489 aa19.96■□□□□ 0.79
CPSF4-203ENST00000430038 MYLIPQ8WY64 445 aa19.96■□□□□ 0.79
CPSF4-203ENST00000430038 UBAC1Q9BSL1 405 aa19.96■□□□□ 0.79
CPSF4-203ENST00000430038 ALDH8A1Q9H2A2 487 aaPredicted RBP19.96■□□□□ 0.79
CPSF4-203ENST00000430038 PNMA2Q9UL42 364 aa19.96■□□□□ 0.79
CPSF4-203ENST00000430038 ABCB11O95342 1321 aa19.96■□□□□ 0.79
CPSF4-203ENST00000430038 CUL9Q8IWT3 2517 aa19.95■□□□□ 0.78
CPSF4-203ENST00000430038 A6NJR5 290 aa19.95■□□□□ 0.78
CPSF4-203ENST00000430038 KLRF2D3W0D1 207 aa19.95■□□□□ 0.78
CPSF4-203ENST00000430038 E7EWF7 191 aa19.95■□□□□ 0.78
CPSF4-203ENST00000430038 CYTH3O43739 400 aa19.95■□□□□ 0.78
CPSF4-203ENST00000430038 ZEB2O60315 1214 aa19.95■□□□□ 0.78
CPSF4-203ENST00000430038 TXNP10599 105 aaKnown RBP19.95■□□□□ 0.78
CPSF4-203ENST00000430038 CYP2C9P11712 490 aa19.95■□□□□ 0.78
CPSF4-203ENST00000430038 PPIGQ13427 754 aaKnown RBP eCLIP19.95■□□□□ 0.783e-6■□□□□ 10.4
CPSF4-203ENST00000430038 LY6KQ17RY6 165 aa19.95■□□□□ 0.78
CPSF4-203ENST00000430038 FBXO11Q86XK2 927 aa19.95■□□□□ 0.78
CPSF4-203ENST00000430038 HIPK3Q9H422 1215 aa19.95■□□□□ 0.78
CPSF4-203ENST00000430038 RAD50Q92878 1312 aa19.95■□□□□ 0.78
CPSF4-203ENST00000430038 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.94■□□□□ 0.78
CPSF4-203ENST00000430038 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.94■□□□□ 0.78
CPSF4-203ENST00000430038 GRIN2CQ14957 1233 aa19.94■□□□□ 0.78
CPSF4-203ENST00000430038 NBPF20Q3BBV1 942 aa19.94■□□□□ 0.78
CPSF4-203ENST00000430038 TMEM199Q8N511 208 aa19.94■□□□□ 0.78
CPSF4-203ENST00000430038 SCFD2Q8WU76 684 aa19.94■□□□□ 0.78
CPSF4-203ENST00000430038 SCLYQ96I15 445 aa19.94■□□□□ 0.78
CPSF4-203ENST00000430038 IL23AQ9NPF7 189 aa19.94■□□□□ 0.78
CPSF4-203ENST00000430038 GPHNQ9NQX3 736 aaPredicted RBP19.94■□□□□ 0.78
CPSF4-203ENST00000430038 DLL1O00548 723 aa19.93■□□□□ 0.78
CPSF4-203ENST00000430038 DHX16O60231 1041 aaKnown RBP19.93■□□□□ 0.78
CPSF4-203ENST00000430038 DNAJB2P25686 324 aa19.93■□□□□ 0.78
CPSF4-203ENST00000430038 PPP2R5BQ15173 497 aa19.93■□□□□ 0.78
CPSF4-203ENST00000430038 SEPT14Q6ZU15 432 aa19.93■□□□□ 0.78
CPSF4-203ENST00000430038 MAP4K1Q92918 833 aa19.93■□□□□ 0.78
CPSF4-203ENST00000430038 RMDN3Q96TC7 470 aa19.93■□□□□ 0.78
CPSF4-203ENST00000430038 POLR3EQ9NVU0 708 aa19.93■□□□□ 0.78
CPSF4-203ENST00000430038 CHD7Q9P2D1 2997 aa19.93■□□□□ 0.78
CPSF4-203ENST00000430038 RGS20O76081 388 aa19.92■□□□□ 0.78
CPSF4-203ENST00000430038 CFBP00751 764 aa19.92■□□□□ 0.78
CPSF4-203ENST00000430038 EIF2AK2P19525 551 aaKnown RBP19.92■□□□□ 0.78
CPSF4-203ENST00000430038 CPT1AP50416 773 aa19.92■□□□□ 0.78
CPSF4-203ENST00000430038 HSD17B4P51659 736 aa19.92■□□□□ 0.78
CPSF4-203ENST00000430038 ARHGAP1Q07960 439 aa19.92■□□□□ 0.78
CPSF4-203ENST00000430038 TROAPQ12815 778 aa19.92■□□□□ 0.78
CPSF4-203ENST00000430038 GRM4Q14833 912 aa19.92■□□□□ 0.78
CPSF4-203ENST00000430038 IGDCC4Q8TDY8 1250 aa19.92■□□□□ 0.78
CPSF4-203ENST00000430038 NSUN6Q8TEA1 469 aaKnown RBP19.92■□□□□ 0.78
CPSF4-203ENST00000430038 ZFP91Q96JP5 570 aaPredicted RBP19.92■□□□□ 0.78
CPSF4-203ENST00000430038 CTAGE1Q96RT6 745 aa19.92■□□□□ 0.78
CPSF4-203ENST00000430038 PIGSQ96S52 555 aa19.92■□□□□ 0.78
CPSF4-203ENST00000430038 MTG1Q9BT17 334 aaPredicted RBP19.92■□□□□ 0.78
CPSF4-203ENST00000430038 PBX4Q9BYU1 374 aa19.92■□□□□ 0.78
CPSF4-203ENST00000430038 MRPL11Q9Y3B7 192 aaKnown RBP19.92■□□□□ 0.78
CPSF4-203ENST00000430038 IFIT3O14879 490 aaKnown RBP19.91■□□□□ 0.78
CPSF4-203ENST00000430038 NKRFO15226 690 aaKnown RBP eCLIP19.91■□□□□ 0.78
CPSF4-203ENST00000430038 GHRHRQ02643 423 aa19.91■□□□□ 0.78
CPSF4-203ENST00000430038 OTOP2Q7RTS6 562 aa19.91■□□□□ 0.78
CPSF4-203ENST00000430038 MB21D2Q8IYB1 491 aaPredicted RBP19.91■□□□□ 0.78
CPSF4-203ENST00000430038 AFG1LQ8WV93 481 aa19.91■□□□□ 0.78
CPSF4-203ENST00000430038 HERVK_113Q902F9 699 aa19.91■□□□□ 0.78
CPSF4-203ENST00000430038 KAT2BQ92831 832 aa19.91■□□□□ 0.78
CPSF4-203ENST00000430038 AMNQ9BXJ7 453 aa19.91■□□□□ 0.78
CPSF4-203ENST00000430038 RIOX1Q9H6W3 641 aa19.91■□□□□ 0.78
CPSF4-203ENST00000430038 PXMP2Q9NR77 195 aa19.91■□□□□ 0.78
CPSF4-203ENST00000430038 U3KPZ7 1027 aaPredicted RBP19.91■□□□□ 0.78
CPSF4-203ENST00000430038 ZBTB5O15062 677 aa19.9■□□□□ 0.78
CPSF4-203ENST00000430038 NR3C2P08235 984 aa19.9■□□□□ 0.78
CPSF4-203ENST00000430038 HOXA13P31271 388 aaPredicted RBP19.9■□□□□ 0.78
CPSF4-203ENST00000430038 TTLL4Q14679 1199 aa19.9■□□□□ 0.78
CPSF4-203ENST00000430038 IL31RAQ8NI17 732 aa19.9■□□□□ 0.78
CPSF4-203ENST00000430038 RUFY2Q8WXA3 655 aa19.9■□□□□ 0.78
CPSF4-203ENST00000430038 DDX41Q9UJV9 622 aaKnown RBP19.9■□□□□ 0.78
CPSF4-203ENST00000430038 RBM8AQ9Y5S9 174 aaKnown RBP19.9■□□□□ 0.78
CPSF4-203ENST00000430038 DOCK5Q9H7D0 1870 aa19.9■□□□□ 0.78
CPSF4-203ENST00000430038 FGBP02675 491 aa19.89■□□□□ 0.77
CPSF4-203ENST00000430038 STXBP2Q15833 593 aa19.89■□□□□ 0.77
CPSF4-203ENST00000430038 ARHGEF16Q5VV41 709 aa19.89■□□□□ 0.77
CPSF4-203ENST00000430038 PSRC1Q6PGN9 363 aaPredicted RBP19.89■□□□□ 0.77
CPSF4-203ENST00000430038 HOMER1Q86YM7 354 aa19.89■□□□□ 0.77
CPSF4-203ENST00000430038 MCF2L2Q86YR7 1114 aa19.89■□□□□ 0.77
CPSF4-203ENST00000430038 GPKOWQ92917 476 aaPredicted RBP eCLIP19.89■□□□□ 0.77
CPSF4-203ENST00000430038 IWS1Q96ST2 819 aa19.89■□□□□ 0.77
CPSF4-203ENST00000430038 SEZ6LQ9BYH1 1024 aa19.89■□□□□ 0.77
CPSF4-203ENST00000430038 MAF1Q9H063 256 aa19.89■□□□□ 0.77
CPSF4-203ENST00000430038 LSG1Q9H089 658 aaKnown RBP19.89■□□□□ 0.77
CPSF4-203ENST00000430038 ZNF576Q9H609 170 aa19.89■□□□□ 0.77
CPSF4-203ENST00000430038 BCAS3Q9H6U6 928 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms